Brevundimonas sp. MF30-B: E4M01_05040
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Entry
E4M01_05040 CDS
T06201
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
brf
Brevundimonas sp. MF30-B
Brite
KEGG Orthology (KO) [BR:
brf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brf03400
]
E4M01_05040 (addA)
Enzymes [BR:
brf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E4M01_05040 (addA)
DNA repair and recombination proteins [BR:
brf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
E4M01_05040 (addA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_16
AAA_12
SLFN-g3_helicase
DUF7782
AAA_30
DEAD
Motif
Other DBs
NCBI-ProteinID:
QBX37189
LinkDB
All DBs
Position
complement(999359..1002853)
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AA seq
1164 aa
AA seq
DB search
MTSPLSPADIARANQAVAADPGLSVFVTANAGSGKTSTLVNRVARLLLKRVRPGDILCIT
YTKAAAAEMQTRLFDKLGGWAVADDSALSESLAELDGRDPRSLTAEELSEARRLFARALE
TPGGLKIQTIHAFCESLLRRFPLEAGVAPGFEVLEDQAALALSHRARADLARAALNQPDG
RVGRAYSHFAVELAFDAFNALLGVIEARRESLNAYLLAIAEGRAPSPYHLTGVTPDETPQ
SLSDDFMRYLDRTAWNAAADAMATGGIMDQRCAERMRAAKQDWTFDSVGQVFLTSGEPRK
QLTTKGSPPGAVEFLTRTSGQYLATLQRVRAARVADETMKVLALADEHHALYKTAKAEAG
ALDFTDLVSRTADLLTRRADAAWVLYKLDGGIEHVLIDEAQDTAPEQWAIVRALTEPFFA
GDGSERPTDVPARTVFAVGDEKQSIYSFQGARPERLRQEAQVYDQAVRHAGHAFQEVPLD
TSFRSTEEVLAFVDAAFHAPERARALVGETGEIPRHLPARLGQHGSVDLWPLFQEPATKP
PEAWTAPVDQEGPQSARKQLARALAREIRRQVEAGVTIHDRKAPEGRRAVRYGDFLILVR
RRDATFEEIIRALKAKGAPVAGADRLKLNAHIVFDDLMALARFALYPDDDLSLAEVLRGP
FCDVPDFGPAHALYPLADAEARNGRSLWRALRERAAEHPQWTEARDLAGALIASRGRDPL
AFFSLALNRLGPDGRSGRARILHRLGREAEEAIDETLAQILAAEARGGTDLETCLALLEQ
ADVQVKREMEGARDEVRVMTVHGSKGLEAPIVILPDTTGKAKPQGPTLMAVDQADGTEAW
LMCPSSKAGDCDASALARQGRIDRTDAESLRLLYVALTRARERVIVMGRAMGRPKEGFEP
GSWWDVVGQTFESLLADGRARDIGDGKFRFGVDPVEAGAAPGEAASSITLPAWVSERPAA
DPGARLAAPSKLAGDIGGRAPSPLDRAAGGLGRFRRGDLIHRLLERLPEAAPGAWPDLAR
RLLARETDLSDAVRDEMIQAALGVLGDERFAAVFGPGSRAEVALTGAAPGLPAGMVLSGR
IDRLVVTPERVLVVDYKTNRPAPDRIEHADPAYVLQMAAYRAVLQRLYPDRPVEAALVWT
DGPRLTPVPAAIMDAALGAATLAG
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgccgctctcccctgccgacatcgcccgcgccaatcaggccgtcgccgccgat
cccggcctgtcggtcttcgtcaccgccaacgccggctcgggcaagacctcgaccctggtc
aaccgggtggcgcgcctgctgctgaaacgggtgcggcccggcgacatcctgtgcatcacc
tacaccaaggccgccgccgccgagatgcagacgcggctgttcgacaagctgggcggctgg
gccgtcgccgacgatagtgcgctgtcggaatccctggccgagctggacgggcgcgacccc
cggtccctgaccgccgaagagctgtcggaggcccggcggctgttcgcccgcgcgctggag
acgccgggcgggctgaagatccagaccatccacgccttctgcgaaagcctgctgcgtcgc
ttcccgctggaggccggcgtggcgccggggttcgaggtgctggaggaccaggccgccctg
gccctgtcgcaccgggcgcgggcggacctggcgcgggcagcgctgaaccagcccgacggc
cgtgtgggccgggcctattcacacttcgcggtcgagctggcgttcgacgccttcaacgcc
ctgctgggcgtgatcgaggcgaggcgcgaaagcctgaacgcctacctgctggccatcgcc
gaaggccgcgcgcccagcccctatcacctgactggcgtcacgcccgacgagacgccgcag
agcctgtccgacgacttcatgcgctacctggaccgcaccgcctggaatgccgcagccgat
gctatggcgaccggcggcatcatggatcagcgctgcgccgagcgcatgagggcggccaag
caggactggacattcgacagcgtcggtcaggttttcttgacatcgggagagccgcgcaaa
cagctgacgaccaaggggtcgccgcccggcgcggtcgagttcctgacccggaccagcggc
caatatctggcgaccctgcagcgcgtccgcgccgcccgcgtcgccgacgagaccatgaag
gtgctagcgctcgccgacgagcatcacgcgctttacaagacggccaaggccgaggccggc
gcgctggacttcaccgacctggtcagccgcaccgccgacctgctgacccgccgggccgac
gccgcctgggtgctgtacaagctggatggcgggatcgagcacgtcctgatcgacgaggcg
caggacacagcgcccgagcaatgggccatcgtgcgcgccctgaccgagccctttttcgcc
ggcgacggaagcgagcgtcccaccgacgttccggcgcgcaccgtctttgccgtgggcgac
gaaaagcagtcgatctactccttccagggcgcccgtcccgaacggttgcgtcaggaagct
caggtctatgaccaggccgtgcgccacgccggccacgcctttcaggaggtgccgctcgac
acctcgttccgctcgactgaagaggtgctggccttcgtggacgccgccttccacgcgccc
gagcgcgcccgcgccctggtcggcgagaccggcgaaattccgcgccacctccccgcgcgt
ctgggccagcacggatcagtggacctttggccgctgttccaggaaccggcgaccaagccg
ccagaggcctggaccgcgccggtcgaccaggaaggcccccagagcgcgcgcaagcagctg
gcccgcgccctcgcccgcgaaatccgccgccaggtcgaggcgggcgtgacgatccatgac
cgcaaggcgcccgagggccggcgcgccgtgcgctatggcgacttcctgatcctggtgcgc
cgccgcgatgcgacgttcgaggagatcatccgcgccctgaaggccaagggcgcgcccgtg
gctggggccgaccgactgaagctgaacgcccacatcgtcttcgacgacctgatggccctg
gcgcgcttcgccttgtatcccgacgacgatctgagcctggccgaggtgctgcgcgggccc
ttctgcgacgtgcccgatttcggaccggcgcatgcgctgtatcctctggccgacgccgaa
gcccggaacggccggtccctatggcgcgccttgcgcgaacgggccgccgagcacccgcaa
tggaccgaggcgcgcgatctggccggcgccctgatcgcgtcgcgcgggcgcgatccgctg
gccttcttctccctggctctgaaccggctcggccccgatggccgttcgggtcgggcgcgc
atactgcacaggctgggccgcgaggccgaagaggcgatcgacgagaccctggcccagatt
ctcgccgccgaggcgcgcggcgggacggacctggagacctgcctggcgcttctggaacag
gccgacgtccaggtgaagcgcgagatggagggcgcgcgcgacgaggtgcgcgtcatgacc
gtgcacggctcgaaggggctggaggcgcccatcgtcatcctgccggacaccaccggcaag
gcgaagccgcagggcccgaccctgatggccgtggatcaggcggatgggaccgaagcgtgg
ctgatgtgtccgtcgtccaaggccggcgattgcgacgcctcggccctggcgcgtcagggc
cggatcgaccgcaccgacgccgagtcgctgcgcctgctctatgtcgccctgacgcgggcg
cgcgagcgggtgatcgtcatgggccgcgccatgggccgtcccaaggaagggttcgagccc
ggttcgtggtgggatgtcgtcggccagacgtttgagagcctgctggccgacggccgcgcg
cgcgacattggcgacggcaagtttcgcttcggcgtcgatccggtcgaggcgggcgcggcg
cccggcgaagccgcctcgagcattaccctgccggcctgggtcagcgagcggccggcggcg
gatccgggcgcgcggctggcggccccgtccaagctggcgggcgacatcgggggccgcgcg
ccgtcgccgctcgaccgggcggcgggcggtctggggcggttccggcgcggcgacctgatc
caccggttgctggagcgactgcccgaggccgcgcccggcgcctggcccgacttggcccgt
cggctgctggcgcgcgagacggacctgtcggatgcggtccgtgacgagatgatccaggcc
gcgctgggcgtgctgggcgacgagcggttcgccgccgtattcgggcccggatcgcgcgcc
gaggtcgccctgaccggcgccgcgcccggcctgccggccggcatggtgctgtcgggacgg
atcgaccggctggtggtgacgcccgagcgggtgctggtggtcgattacaagacaaatcgg
ccggcgccggatcgtatcgaacacgccgatccggcctatgtgctgcagatggcggcctat
cgcgcggtgttgcagcggctgtatccggaccgcccggtcgaggcggcgctggtgtggacc
gacgggcctcggctgacgccggttccagcggcgatcatggacgccgcccttggcgcggcg
acgctcgcgggctag
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