Brevundimonas sp. MF30-B: E4M01_05045
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Entry
E4M01_05045 CDS
T06201
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
brf
Brevundimonas sp. MF30-B
Brite
KEGG Orthology (KO) [BR:
brf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brf03400
]
E4M01_05045 (addB)
Enzymes [BR:
brf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E4M01_05045 (addB)
DNA repair and recombination proteins [BR:
brf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
E4M01_05045 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Abhydrolase_8
Motif
Other DBs
NCBI-ProteinID:
QBX37190
LinkDB
All DBs
Position
complement(1002850..1005882)
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AA seq
1010 aa
AA seq
DB search
MTSFDPFAGSGPRWFTIAAQRPFLEDLANGVLAWLGEASPETLSDAIILLPNRRAARAFS
TALARAAGERPVLLPEVRPLGDLEEDEPPFAPGALGLDLPPAIAPLRRRFEMARLIVERF
DADLTPLRALELADALGGFLDSCQLEEIVDPARVADLVEGEMARHWERSAQFLSLAVEAW
PERLKTLGLVDPAWRRATLLRRLAETWDAEPPARPVIAAGSTGTLPSAADVLGAVARAPQ
GCVVVPGLDQALDEAAWSKIEEAHPLAALKRLLERHGVERAAVHRWLGSEVETARSRVIQ
EALRPAEATDDWRGAIRELRARVWADRSADPIAEGLKGLSLLTVRAEEEAASAIALMMRE
ALETPGRTCALVTPDLDLSRRVEARLERWGITADSSAGSPLALTEAGGLVQLAARWMGDP
LSPQTLLALLKHARRRPELATEIAARTLEGKGLRGPRPRDWTALLRKLEQAGQPRDGQAA
PSPERLARLSEARDLAETLQGLVEAAHAPFAGDRAPLDKAATTLTELIEALAGPAAWGGR
DGEAAAGLLSALIEQGEALGGVTPDELAALVAELIAAETVRTGGASHPRLRILGAIEARL
ARADLMILAGLEEGVWPRPAPTDPFLSRPMRKALGLPAPERRLGQTAQDFVQAACAPEAV
MVVRERRGGQPAVRSRWLWRLEMLVSGAHGETTPVTIAAPDAVLSLARALDAPARATPDY
ARRPEPRPPVHRRPRQLPVTSIERWVRDPYAIYASRVLGLKKLDRPGASAEAMARGTAIH
AALETVVRTWPDALPEDCAEQIEAWLIHEIDAAGFEDHAMARERPLAANCARWLEGFERA
RRARGAQLLVEQSGALTFNAPGGPFTVTAKADRIELDATGAAVIDFKTGTAPQAKQVAAG
FAPQLTLAAAILAEGGFPAPPTEATELLYVQLTGRREPGKVTDVGAEGAAFMAERELARL
KAGVALFDDEAMPYRSWVAPQFMGTFGGNFDHLARVWEWHVAGAEEEGAQ
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
gtgacttcgttcgaccccttcgccgggtccggcccgcgctggttcacgatcgccgctcaa
cggccgttcctggaagacctggccaacggcgtgctggcctggctgggcgaggcctcgccg
gaaacattgtcggacgccataatcctgctgcccaatcgacgcgccgctcgcgccttctcg
accgccctggcgcgggcggccggggagcggccggtgctgctgcccgaggtccgtccgctg
ggcgacctggaagaggacgagccgcccttcgcccccggcgcgctcggcctggacctgccg
cccgccatcgcgcccctgcggcgccggttcgagatggcgcgcctgatcgttgagcggttc
gacgcggatctgacgccgctgcgggcgctggagctggccgatgcgctgggcggctttctg
gactcctgccagctggaggagatcgtcgatcccgcccgcgtcgccgacttggttgagggc
gagatggcgcggcactgggagcggtcggcgcagtttctgtccctcgccgtcgaggcctgg
cccgaacggttgaagacgctggggctggtcgatcctgcgtggcgacgcgccaccctgctg
cggcggctggccgagacctgggacgccgaaccgcccgcccgcccggtcatcgccgccggc
tcgaccggcaccctgccctcggccgccgatgtcctgggcgctgtggcgcgggcgccccag
ggctgcgtcgtcgtgcccggcctggatcaggccctggacgaggcggcgtggtccaagatc
gaggaggcgcatccgctggcggcgctgaaacggctgctggaacggcacggcgtggagcgt
gcggccgtccaccgctggctgggttcagaggtcgagacggcgcgctcgcgcgtcatccag
gaggctctgcggcccgccgaggcgacggacgactggcgcggcgccatccgcgaactgcgc
gcacgcgtctgggccgaccgctccgccgaccccatcgccgaagggttgaagggcctgtcg
ctgctgaccgtccgcgccgaggaggaggccgcctccgccatcgccctgatgatgcgagag
gcgctggagacgccgggccgcacctgcgccctggtgacgccggacctggatctgtcgcgc
cgggtcgaggcgcggctggagcgctggggcatcacggcggactcgtcggcgggctcgccc
ctggccctgaccgaagcgggcgggctggttcagctggccgcgcgctggatgggggacccg
ctgtcgccccagaccctgctggccctgctgaagcacgcgcggcgtcgccccgagcttgcg
accgagatcgcggcccgcactctggagggcaagggtctgcgcggcccgcgtccgcgcgac
tggaccgccctgttgcgcaaactggagcaggccggccaaccgcgcgacggccaggctgcg
ccctcgcccgagcgcctggcccgtctgagcgaggcgcgggacctggccgagaccctgcag
ggtctggtcgaggcggcgcacgcgcccttcgccggcgaccgggcgccgctggacaaggcc
gcgacaaccctgaccgaactcatcgaggcgctggccgggccagccgcctggggcgggcgg
gacggcgaggcggccgccggccttctgtcggccctgatcgaacagggcgaggccctgggc
ggcgtcacccccgacgagctggcggccctggtcgccgaactgatcgcggccgagaccgtg
cgcaccggcggcgccagccatccgcgactccgcattctgggcgccatcgaagcgcggctg
gcgcgggcagacctgatgatcctagcgggactggaggagggcgtctggccccggcccgcg
ccaaccgatcccttcctgtcgcgacccatgcgcaaggccctgggcctgccggcgcccgag
cggcggctgggtcagacagcccaggacttcgtccaggccgcctgcgcgccagaagcggtc
atggtggtgcgcgagcggcgcggcggtcagccggccgtccggtcacgctggctgtggcgg
ctggaaatgctggtcagcggcgcacatggcgaaaccacgcccgtaaccatcgctgcgccc
gacgcggtgctgagcttggcccgcgcgctggatgcgcccgcgcgcgcgacgcccgactat
gcgcgccgccccgagccgcgccccccggtccaccgccggccgcgccaactgcccgtgacc
agcatcgagcgctgggtgcgcgatccctacgccatctacgcctcgcgcgtgctggggctc
aagaagctggaccggccgggcgcctcggccgaggccatggcgcgcggcaccgccatccac
gcggcgctggagaccgtggtgcggacctggccggacgccctgccggaagactgcgccgaa
cagatcgaagcctggctgatccatgagatcgacgccgcgggtttcgaggatcacgccatg
gcgcgcgaacgccccttggcggccaactgcgcccgctggctggaaggcttcgagcgggcc
cggcgcgcgcgcggcgcccagcttctggtcgagcagtcgggcgccttgacctttaacgcg
cccggcgggcccttcaccgtcaccgccaaggccgaccggatcgaactggatgcgacgggc
gcagcggtcatcgacttcaagaccgggaccgcgcctcaggccaagcaggtggccgccggc
tttgcgccgcagctgaccctggcggccgccatcttggccgagggcggcttccccgcgccg
ccgaccgaggcgacagagcttctctacgtccaactgaccggccgacgcgagccgggcaag
gtcaccgacgtcggcgccgagggcgctgccttcatggccgagcgcgagctggcgcggctc
aaggccggggtcgccctcttcgacgacgaggccatgccgtatcgcagctgggtcgcgcct
caattcatggggaccttcggcggcaatttcgaccatctggcgcgcgtctgggaatggcat
gtcgccggggccgaagaagagggcgcgcaatga
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