Brevundimonas sp. MF30-B: E4M01_06310
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Entry
E4M01_06310 CDS
T06201
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
brf
Brevundimonas sp. MF30-B
Brite
KEGG Orthology (KO) [BR:
brf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
brf03032
]
E4M01_06310 (gyrA)
03400 DNA repair and recombination proteins [BR:
brf03400
]
E4M01_06310 (gyrA)
Enzymes [BR:
brf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
E4M01_06310 (gyrA)
DNA replication proteins [BR:
brf03032
]
Prokaryotic type
DNA Topoisomerases
E4M01_06310 (gyrA)
DNA repair and recombination proteins [BR:
brf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
E4M01_06310 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QBX37417
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All DBs
Position
1247805..1250558
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AA seq
917 aa
AA seq
DB search
MTDDTLQNPPAPRGGDISNITIEDELRRSYLDYAMSVIVSRALPDARDGLKPVHRRILYS
MHDLNMTPERSYSKCARVVGDVLGRFHPHGDASVYMALVRMAQPFSMGLMLVDGQGNFGS
VDGDMPASMRYTEAKMAPAAVALMADIDKDTVDFQPNYDEKELEPVVLPSRIPNLLVNGA
GGIAVGMATNIPPHNLGEVVDAALALLDDPEVSDDALLDIVPGPDFPTGGEIMGRTAPRN
ALRDGRGSVIVRGKASIEEIRKDREAIVITELPFQVNKQSLIERIAEMVREKRLEGISDV
RDESDRQGMRMVIELKRDASGDVILNQLYRYTALQSSFGVNMLALNRGRPEQMGLRQLLQ
IFLDFREEVVVRRVKFELAKARDRGHVLVGLAVAVANIDEVIHIIRSSADPAEARERLQA
KAWPVGDMMALVELIADPRTVLVEGDKIRLTDEQARAILALTLSRLTGLGRDDIFGEARG
LADTIQGHLTILSDRKNVLGIIRDDLIAVKDQFAVPRRTVIGEGDAEMEDEDLIPREDMV
VTVTHGGYVKRVALNAYRTQHRGGKGKSGMTMKDEDAITGVFSASTHTPVLFFATNGRAY
KLKTWRLPLGAPTSRGKAFVNLLPIEPGDSIMNVLPLPEDETTWGDYDIMFATQSGDVRR
NKLSDFATVNRAGKIAMKLEDGDHMVGVGLCTADDDVMLTTALGRAIRFKADDVRVFKGR
DSTGVRGIRLQDGDQVISMAVLGRVDASPEERAAYVKHANAMRRAVGEETEETPAEGDDE
AVAEASLSVERIAELGAAEQFILTVTDTGFGKRSSAYEYRRTGRGGQGLTAHGLGGRAGT
RLAAAFPVQDGDDLLMVTDGGQMIRTPVSQVRVVGRSSQGVTIFRTGKDEKVVSVERLPE
SADGEADVAVDEDPGEG
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgacgacaccttgcagaacccgcccgccccccgcggcggcgacatctccaacatc
accatcgaggacgagctgcgtcgctcgtatctcgattacgccatgagcgtgatcgtcagc
cgcgccctgccggacgcgcgcgacggtttgaagcccgtgcaccgtcgcatcctgtactcg
atgcacgatctgaacatgacgcccgagcgcagctattcgaagtgcgcgcgcgtggtcggt
gacgtgctgggccggttccacccgcacggcgacgcctcggtctatatggcgctggtgcgc
atggctcagcccttctcgatggggctgatgctagtcgacggccagggcaacttcggttcg
gtcgacggcgatatgccggcttcgatgcgttacaccgaggccaagatggctccggccgcc
gtcgccctgatggccgacatcgacaaggacactgtcgatttccagcccaactacgacgaa
aaggagctggagccggtcgtcctgccgagccggattccgaacctgctggtcaatggcgcg
ggcggcatcgccgtcggcatggcgaccaacatcccgccgcataacctgggcgaggtcgtg
gacgcggccctggccctgctggacgatcccgaagtctcggacgacgctctgctggacatc
gtgcccggccccgacttccccaccggcggcgagatcatgggccgcaccgcgccgcgcaac
gccctgcgcgacggacgcggctcggtcatcgtgcgcggcaaggcctcgatcgaggagatc
cgcaaggaccgcgaggccatcgtcatcaccgaactgccgttccaggtgaacaagcagagc
ctgatcgaacgcatcgccgaaatggtgcgtgagaagcgccttgaaggcatctccgacgtc
cgcgacgaatccgaccgtcagggcatgcgcatggtgatcgagctgaagcgcgacgcctcg
ggcgacgtgatcctgaaccagctctatcgctacacggcgctgcagtcgtcgttcggcgtc
aacatgctggcgctgaaccgcggtcggcccgaacagatgggcctgcgccagctgctgcag
atcttcctcgacttccgcgaggaggtggtggtccgccgcgtcaagttcgagctggccaag
gcccgcgaccgcggccacgtcctggtcggtctggccgtggccgtggccaacatcgacgag
gtgatacacatcatccggtcgtcggccgatcccgccgaggcgcgcgagcggctgcaggcc
aaggcctggcccgtcggggacatgatggccctggtcgagctgatcgccgatccgcgcacc
gttctggtcgagggcgacaagatccgcctgaccgacgaacaggcccgcgccatcctggcc
ctgacgctcagccgcctgaccggcctgggccgcgacgacatcttcggcgaggcgcgcggc
ctggccgacaccatccagggccacctgaccatcctgtcggaccgcaagaacgtcttgggc
atcatccgcgacgacctgatcgcggtgaaggaccagttcgccgtgccgcgtcgcaccgtc
atcggcgaaggcgacgccgagatggaggacgaagacctgatcccgcgcgaggacatggtc
gtcaccgtcacccacggcggctacgtcaagcgcgtggcgctcaacgcctatcggacccag
catcgcggcggcaagggcaagtccggcatgacgatgaaggacgaggacgccatcaccggc
gtcttctccgcctcgacccatacgccggtcctgttcttcgccaccaacggccgggcctac
aagctcaagacctggcgtctgccgctgggcgcgccgacctcgcgcggcaaggccttcgtc
aacctgctgcccatcgagccgggcgacagcatcatgaacgtgttgcccctgcccgaggac
gagaccacctggggcgactacgacatcatgttcgccactcagtcgggcgatgtgcgcagg
aacaagctgtcggacttcgccacggtgaaccgcgccggcaagatcgccatgaagctggaa
gacggcgaccacatggtcggcgtcggcctgtgcaccgccgacgacgacgtcatgctgacg
acggccttgggccgggccatccgcttcaaggccgacgacgtccgcgtcttcaagggccgc
gattccaccggcgtgcgcggcatccgtctgcaggacggcgaccaggttatctccatggcc
gtgctgggccgcgtcgacgcctcgcccgaggaacgcgccgcctatgtcaaacacgccaac
gccatgcgccgcgccgtgggcgaagagaccgaggagacgcccgcagagggcgacgacgag
gcggtcgcggaagccagcctgtcggtcgagcgcatcgccgaactgggcgcggccgagcag
ttcatcctgacggtcaccgacaccggcttcggcaagcgatcctcggcctacgagtatcgc
cgcaccggtcgcggcgggcaggggctgacggcccatggcctgggcggccgcgccggcacg
cgcctggccgccgccttcccggttcaggacggcgacgatctgctgatggtcaccgacggc
ggtcagatgatccgcacgccggtcagccaggtccgcgtggtcggccgctccagccagggc
gtcaccatcttccgcacgggcaaggacgagaaggtcgtctccgtcgagcgcctgcctgaa
agcgcggacggcgaggcggacgtggccgttgacgaggatccgggcgagggctga
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