KEGG   Brevundimonas sp. MF30-B: E4M01_09120
Entry
E4M01_09120       CDS       T06201                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
brf  Brevundimonas sp. MF30-B
Pathway
brf00010  Glycolysis / Gluconeogenesis
brf00020  Citrate cycle (TCA cycle)
brf00260  Glycine, serine and threonine metabolism
brf00280  Valine, leucine and isoleucine degradation
brf00310  Lysine degradation
brf00380  Tryptophan metabolism
brf00620  Pyruvate metabolism
brf00630  Glyoxylate and dicarboxylate metabolism
brf00640  Propanoate metabolism
brf00670  One carbon pool by folate
brf00785  Lipoic acid metabolism
brf01100  Metabolic pathways
brf01110  Biosynthesis of secondary metabolites
brf01120  Microbial metabolism in diverse environments
brf01200  Carbon metabolism
brf01210  2-Oxocarboxylic acid metabolism
brf01240  Biosynthesis of cofactors
Module
brf_M00009  Citrate cycle (TCA cycle, Krebs cycle)
brf_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
brf_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
brf_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
brf_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:brf00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    E4M01_09120 (lpdA)
   00020 Citrate cycle (TCA cycle)
    E4M01_09120 (lpdA)
   00620 Pyruvate metabolism
    E4M01_09120 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    E4M01_09120 (lpdA)
   00640 Propanoate metabolism
    E4M01_09120 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    E4M01_09120 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    E4M01_09120 (lpdA)
   00310 Lysine degradation
    E4M01_09120 (lpdA)
   00380 Tryptophan metabolism
    E4M01_09120 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    E4M01_09120 (lpdA)
   00670 One carbon pool by folate
    E4M01_09120 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:brf04147]
    E4M01_09120 (lpdA)
Enzymes [BR:brf01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     E4M01_09120 (lpdA)
Exosome [BR:brf04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   E4M01_09120 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 FAD_oxidored NAD_binding_8 HI0933_like GIDA FAD_binding_3 Lys_Orn_oxgnase Amino_oxidase DAO Thi4 2-Hacid_dh_C ANAPC4_WD40 SpoVS Lycopene_cycl
Other DBs
NCBI-ProteinID: QBX37909
LinkDB
Position
complement(1799910..1801316)
AA seq 468 aa
MADTFDLIVIGSGPGGYVAAIRASQLGLKVAIVERENLGGICLNWGCIPTKALLKSGEKF
ESLSHLKDYGLSASGASFDFDAIIQRSRGVAKQLNQGVGFLMKKNKIEVVSGDAKLEKGQ
GAPKVVVALTDGQSRTLEAKSVMLAVGARARALPQIGLEADGERIWAYREAMAPKALPKS
LIVIGSGAIGIEFGSFYRALGSDVTVVEAVDRIMPVEDEEVSKAAQKSFEKRGMKFKVGA
KVTKVSKDSKGVKVAVEIGGKAETLEAEVCISAVGITANTDGIGLEALGVELDRGHIKTD
SHCQTNVKGLYAIGDCAGAPWLAHKASHEGIHAAEHIAGFKTPNVHSPIAGCTYAQPQVA
SVGVTEQQAKADKRDVKIGRFPFKVNGKAIASGDTDGFVKVIFDAKTGALIGAHMIGHEV
TEMIQGYVTAITMEATEEDIHGIVYPHPTMSEAMHEAALDAYGRVIHI
NT seq 1407 nt   +upstreamnt  +downstreamnt
atggctgacaccttcgatctcatcgtcatcggctcgggcccggggggctatgtggccgcg
atccgcgccagccagctgggcctgaaagtcgccattgtcgaacgcgagaacctgggcggc
atctgcctgaactggggctgcatccccaccaaggcgcttctgaaatccggcgagaagttc
gaaagcctgtcgcatctgaaggactacggcctgtccgcctcgggcgcgtcgttcgacttc
gacgccatcatccagcgttcgcgcggcgtggccaaacagctgaatcagggcgtcggcttc
ctgatgaagaagaacaagatcgaggtggtgtcgggcgacgccaagctcgagaaggggcag
ggggcgccgaaagtcgtcgtcgccctgacggacggccagtcgcgtacgctggaggccaag
tcggtcatgctggccgtcggcgcccgcgcccgcgccctgccgcagatcggcctggaggcc
gacggagagcgcatctgggcctatcgcgaggcgatggcgcccaaggccctgcccaagtcg
ctgatcgtcatcggctcgggcgccatcggcatcgagttcggcagcttctatcgtgcgctg
ggctccgacgtgaccgtcgtcgaggcggtggaccgcatcatgcccgttgaggacgaagag
gtctccaaggccgcgcagaagtcgttcgaaaagcgcggcatgaagttcaaggtcggggcc
aaggtcaccaaggtgtccaaggactccaagggcgtgaaagtggccgtcgagatcggcggc
aaggccgagacgctggaggccgaggtctgcatctcggcggtcggcatcaccgccaacacc
gacggcatcggcctggaggcgctgggcgtcgagctggaccgtggtcacatcaagaccgac
agccactgccagacaaacgtcaagggcctgtacgccatcggcgactgcgccggcgcgccc
tggctggcgcacaaggcttcgcacgaaggcatccacgccgctgagcatatcgccggcttc
aagacgccgaacgtgcattctccgatcgccggctgcacctacgcccagccccaggtcgcc
tcggtcggcgtgaccgaacagcaggccaaggccgacaagcgcgacgtcaagatcggccgc
ttccccttcaaggttaacggcaaggccattgcgtcgggcgacaccgacggcttcgtaaag
gtgatcttcgacgccaagacgggcgccctgatcggcgctcacatgatcggccacgaggtg
accgagatgatccagggttacgtcaccgccatcaccatggaggcgacggaagaagacatc
cacggcatcgtctatccgcacccgacgatgagcgaggcgatgcacgaggcggcgctcgac
gcctacgggcgcgtcatccacatctag

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