Brevundimonas sp. GW460-12-10-14-LB2: A4249_00535
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Entry
A4249_00535 CDS
T04395
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
brg
Brevundimonas sp. GW460-12-10-14-LB2
Pathway
brg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
brg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A4249_00535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brg03019
]
A4249_00535
Enzymes [BR:
brg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A4249_00535
Messenger RNA biogenesis [BR:
brg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A4249_00535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Utp25_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ANC52303
UniProt:
A0A168MYC3
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All DBs
Position
complement(89492..90967)
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AA seq
491 aa
AA seq
DB search
MGLNKALLQALASTGYTKPTPIQEKAIPDVMAGKDLLGIAQTGTGKTAAFALPILHRLAE
NRIAPKPRTTRVLVLSPTRELATQIGDSFKAYGAHLGFRVAVIFGGVKYGGQERALQQGL
DILVAAPGRLLDHIQQKNLDLSSTEIFVLDEADQMLDLGFIKPIRQIVAKIPAKRQNLFF
SATMPSEIGKLAGELLKDPVKVQVTPQSTTVQRISQSVVYIEQGRKRALLTEMFSDPEYT
RCLVFTKTKHGADKVAAYLEAGGVEAGAIHGNKSQPQRERTLEAFKKGKLRVLVATDIAA
RGIDVDGVSHVVNFELPHVPESYVHRIGRTARAGKDGTAVSFVAGDEMKLLRDIEKVTRQ
KIPAIDRRNDKALGQLDATIMATGVGKKATMPEREGGERNEGGQGRGGRGRRAPHREGVR
PEGGGQPHRQRRNRPGETPAAPRPERAYNPLAGERVPSINDNVKPAEGEMKRRPRRRPSN
GGKGYGGAAKG
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgggcctgaacaaggccctgctgcaggccctggcctcgaccggctacaccaagccgacc
ccgatccaggaaaaggccatccccgacgtcatggccggcaaggacctgttgggcatcgcc
cagaccggcaccggcaagaccgccgccttcgccctgccgatcctgcatcgcctggccgaa
aaccgcatcgcccccaagccgcgcacgacccgcgtgctggtcctgagccccacgcgtgaa
ctggccacccagatcggcgacagcttcaaggcctatggggcgcacctgggcttccgcgtc
gcggtgatcttcggcggcgtgaaatacggcggtcaggagcgggccctgcaacagggtctg
gacatcctggtcgccgcgcccggccgcctgctggaccacatccagcaaaagaacctggac
ctgtcctcgaccgagatcttcgtcctggacgaggccgaccagatgctggacctgggcttc
atcaagccgatccgccagatcgtcgcaaagatcccggccaagcgccagaacctgttcttc
tcggcgaccatgccgtctgagatcggcaagctggcgggcgaactgttgaaggacccggtc
aaggtccaggtcacgccacagtcgaccacggtgcagcgcatcagccagtcggtcgtctat
atcgaacagggcaggaagcgcgccctgctgaccgagatgttcagcgatcccgaatacacg
cgctgcctggtcttcaccaagaccaagcacggcgccgacaaggtcgcggcctatctggaa
gccggcggcgtcgaggccggggccatccacggcaacaagagccagccccagcgtgaacgc
accctggaagccttcaagaagggcaagctgcgcgtcctggtcgccaccgacatcgccgcg
cgcggcatcgacgtggacggcgtctcgcacgtcgtaaacttcgaactgccgcacgtgccg
gaaagctacgtccaccgcatcggccgcacggcgcgggcgggcaaggacggcaccgccgtc
agcttcgtcgccggcgacgagatgaagctgctgcgcgacatcgaaaaggtcacacgccag
aagatcccggccatcgaccgtcgtaacgacaaggccctgggtcagctggacgccaccatc
atggcgaccggcgtcggcaagaaggcgaccatgccggaacgcgagggcggcgagcgcaac
gagggcggccagggacggggcggtcgcggccgtcgcgcgccacaccgcgagggcgtgcgt
ccggaaggcggcggccagccgcaccgccagcgtcgcaaccgcccgggcgagaccccggcg
gccccgcgtcccgagcgcgcctacaaccccctggccggcgagcgcgtcccctcgatcaac
gacaatgtcaaaccggccgagggcgaaatgaagcgccgcccccgtcgccgcccgtcgaac
ggcggcaagggctacggcggcgccgccaagggctga
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