Brevundimonas sp. GW460-12-10-14-LB2: A4249_11290
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Entry
A4249_11290 CDS
T04395
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
brg
Brevundimonas sp. GW460-12-10-14-LB2
Brite
KEGG Orthology (KO) [BR:
brg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brg03400
]
A4249_11290
Enzymes [BR:
brg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A4249_11290
DNA repair and recombination proteins [BR:
brg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
A4249_11290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Sigma70_r2
Motif
Other DBs
NCBI-ProteinID:
ANC54178
UniProt:
A0A160HYR1
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All DBs
Position
2273144..2276197
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AA seq
1017 aa
AA seq
DB search
MSVFDPFLGDTPRWYAIPAHRPFLEDLAAGVLAWLGDLPPETLSDATILLPNRRAARAFT
GALSKLSQGRPVLLPQVRPLGDLEEDEPPFTPGALGLDLPPAIPALTRRFEMARMIVEQF
DASLSPMRALDLADALGGFLDSCQLEEIQNPERIATLVDGEMAEHWERSAEFLGLAVEAW
PKRLAELGLVDPAWRRATLLRRLAELWDREPPRQPVIAAGSTGTVPAAGDVLKAVARAPL
GCVVLPGLDLDLDAGVWDRLDEQHPQSAMKRLLDRCDIVRESVRPWFRPAVPAAVEARGL
ARQRLVNEALRPAEATDDWRRAIRDIRSAAAARSEARDPIAEGLQGLSLLSVRAEEEAAA
AIALMMRETLGTPGKTCALVTPDQALGRRVAARLERWGVIPDSSAGAPLSRLPAGALVDL
CARWIADPVQPHLLLAVVKHPLVRFDLGDAPQAAAVAALEEHALRGPRPRDFAAIHRRLL
EAVQPDRRGKAPPEWKQARLSGATRLVDQLQAAVEAATAVFTPDADLNVAASALTRLIET
LAGQNAWAGPDGEAAAALLSGLIEGGASLGRIRRGELAELVTSLIKENVVRTGGATHPSL
RILGAIEARLVRADRMILAGLEEGVWPQAAPTDPFLSRPMRKALGLPPPERRLGQTAQDF
VQAACADEVILIHSERRGGQPAVRSRWLWRLEMLTRGAGVALPRPTTVLDWARALDAPPP
GPPRFAKRPEPRPPVHRRPRSLYVTRIERWVRDPYAIYALWVLGLEAMERPGASAEALAR
GNAVHAAIERLTLDWPNDLPDDCEAILHDHLLRELGARGFEDAAMAREAPLARNCARWLT
EFERRRRARGVDILVEQQGTMIFDAPAGPFTVKAFADRIELASDGAAVMDFKTGAAPSAK
QVKSGFAPQLTLTAAILADGGFKDTNGPVTPDELTYVRVVGRKTAGEVVTRASGLEAADL
AQAALEGLKRRVARFDDENTPYVSWAAPQFMGNQGGNYDHLARVWEWSVIGDGEDSE
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgtcttcgatcccttcctcggcgacacgccgcgctggtacgccatccccgcgcac
cggccgttccttgaagacctggccgccggcgtcctggcctggctgggcgatctgccgccc
gaaaccctgtcggacgccaccatcctgttgcccaaccgccgggcggcgcgcgccttcacc
ggcgccctctccaagctgtcgcagggtcgccccgttctgctgcctcaggtgcggccgcta
ggcgatctggaggaggacgagccgccgtttacgcccggcgccctgggtctggacctgccg
cccgccatccccgccctgacccgccggttcgagatggcgcggatgatcgtcgaacagttc
gatgcgtccctgagcccgatgcgcgcgctggacctggccgacgcgctgggcggcttcctc
gattcctgccaactggaagagattcagaaccccgagcggatcgcgaccctggtcgacggc
gaaatggccgaacactgggaacggtcggccgagtttctgggtctggcggtcgaggcctgg
ccgaagcgtctggccgaactgggtctggtcgatccggcctggcgtcgcgcgaccctgctg
cgccgcctcgccgagctgtgggaccgcgagccgccgcgccagcccgtcatcgccgccggc
tcgaccggcacggttcccgccgccggcgacgtgctgaaggccgtggccagggcgccgctg
ggctgcgtcgtcctgcccggcctcgacctggatctggacgccggcgtctgggaccggctg
gacgaacaacatccgcaaagcgcgatgaagcggctgctggaccgctgcgacatcgtgcgc
gaaagcgtccgcccctggtttcgtcccgccgttcctgcggccgtcgaggcgcgcggattg
gcgcgccagcggctggtcaacgaggcgctgcgacccgccgaggccaccgacgactggcgc
cgcgccatccgcgacatccgctcggccgccgctgcgcgcagcgaggcgcgtgatccgatc
gccgagggcttgcagggcctgtcccttctgtccgtccgcgcggaggaagaggccgccgcc
gccatcgccctgatgatgcgcgagacgttgggaacgccgggcaagacctgcgccctggtc
acgccggatcaggccctgggccgccgcgtcgccgcccggctggagcgttggggggtcatc
cccgattcgtccgccggcgcccccctgtcgcgcctgcccgccggcgccctggtcgatctg
tgcgcgcgctggatcgccgatccggtccagccccatctgctgctcgccgtggtcaaacat
ccgctggtccggttcgatctgggcgacgctcctcaggccgccgccgtcgccgcgctggag
gaacacgccctgcgcggtccccgcccgcgcgacttcgccgccatccaccgccgcctgctg
gaggcggtccagcccgaccggcgcggcaaggcgccgccggaatggaagcaggccaggctg
tcgggcgcgacccgtttggtcgatcagcttcaggccgcagtcgaagccgcgaccgccgtt
ttcacccccgacgcggatctgaacgtcgccgcctcggccctgacccggctgatcgaaacc
ctggccggccagaacgcctgggccggccccgacggcgaggccgccgccgccctgttgtcc
ggcctgatcgagggcggggcgtcgttgggccgcatccgccgcggggaactggccgaactg
gttacatccttgatcaaggaaaacgtcgtgcggaccggcggggccacccatccgtcgctg
cgcattctaggggccatcgaggcgcgtctggtgcgcgcggaccggatgatcctggccggg
ctggaggagggcgtctggccccaggcggccccgaccgatcccttcctgtcgcgcccgatg
cgcaaggccctgggcctgccgccgcccgaacgtcgcctgggccagacggcgcaggatttc
gtccaggccgcctgcgccgacgaggtcatcctgatccacagcgagcggcgcggcggacag
cccgccgtccgctcgcgctggctgtggcggcttgagatgttgacgcgcggggccggcgtg
gcgttgccgcgtcccacgaccgtgcttgactgggcccgcgccctggacgcgcccccgccc
ggcccgccccggttcgccaaacggccggagccgcgcccgccggtgcatcgccgtccgcgc
agcctgtatgtcacccgcatcgaacgctgggtgcgcgacccttacgccatctacgccctg
tgggtgctggggctggaggcgatggagcggcccggcgcatccgccgaagcgctggcgcgg
ggcaacgccgtccacgccgccatcgagcggctgacgctggactggccgaacgacctgcct
gacgactgcgaggccatcctacatgaccatctgctgcgcgaactgggcgcacgcggcttc
gaggatgcggccatggcccgcgaggcgccgctggcccgcaactgcgcccgctggctgacc
gagttcgagcgccggcgtcgggcgcgcggcgtcgatatcctggtggaacagcaggggacg
atgatcttcgacgcccccgctggccccttcaccgtcaaggccttcgccgaccggatcgaa
ctggcgtccgacggcgcggcggtcatggacttcaagaccggggcggcgccgtccgccaaa
caggtcaagtccggcttcgcgccgcaactgaccctgaccgccgccatcctggccgacggc
gggttcaaggacaccaacggcccggtcacgcccgacgaactcacctatgtccgcgtggtc
gggcgaaaaacggcgggcgaagtcgtcacccgcgcctcgggtcttgaggccgccgacctg
gcccaggcggcgctggaggggctgaagcgccgggtcgctcgtttcgacgacgagaacacg
ccttacgtctcttgggccgcgcctcagttcatgggcaatcagggcggcaactacgaccat
ctggcccgcgtctgggaatggtcggtgatcggcgacggcgaggacagcgaatga
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