Brevundimonas sp. GW460-12-10-14-LB2: A4249_12505
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Entry
A4249_12505 CDS
T04395
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
brg
Brevundimonas sp. GW460-12-10-14-LB2
Pathway
brg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
brg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A4249_12505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brg03019
]
A4249_12505
Messenger RNA biogenesis [BR:
brg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
A4249_12505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
ANC54398
LinkDB
All DBs
Position
complement(2505326..2505802)
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AA seq
158 aa
AA seq
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MSGLDAYRPNVGVVLFNREGLVWYGQRHATPGPHNWQFPQGGVDAGEDLEAAARRELHEE
TGVTSIELLARTDDWILYDFPPEAMNNAKAWRGFKGQKQQWFAFRFTGDEAEIDLAADDE
IEFDAWRWGPLSDACDLIVPFKRPAYEQVVAAFSHLAE
NT seq
477 nt
NT seq
+upstream
nt +downstream
nt
gtgtccggtctcgacgcctaccgccccaatgtcggggtcgtgctgttcaaccgcgagggt
ctggtctggtacggccagcggcacgctacgcccggcccgcataactggcagttcccgcaa
ggcggcgtcgatgcgggcgaggatctggaagcggccgcccgccgcgaactgcacgaggag
accggcgtcacctcgatcgaactgctggcgcggacggacgactggatcctgtacgacttc
ccgcccgaagccatgaacaacgccaaggcctggcgcggtttcaagggtcagaagcagcag
tggttcgccttccgcttcaccggcgacgaagccgagatcgatctggcggccgacgacgag
atcgagttcgacgcctggcgctgggggccgctgtcggacgcctgcgacctgatcgtgccg
ttcaaacgccccgcctatgaacaggtcgtcgccgccttctcgcacttggcggaatag
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