Brevundimonas sp. GW460-12-10-14-LB2: A4249_13360
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Entry
A4249_13360 CDS
T04395
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
brg
Brevundimonas sp. GW460-12-10-14-LB2
Pathway
brg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
brg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A4249_13360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brg03019
]
A4249_13360
03016 Transfer RNA biogenesis [BR:
brg03016
]
A4249_13360
Enzymes [BR:
brg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
A4249_13360
Messenger RNA biogenesis [BR:
brg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
A4249_13360
Transfer RNA biogenesis [BR:
brg03016
]
Prokaryotic type
tRNA degradation factors
A4249_13360
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
ANC54548
LinkDB
All DBs
Position
2696236..2698470
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AA seq
744 aa
AA seq
DB search
MFDIKRKTIDWAGRPLTLETGRIARQADGAVLATYGETVVLATVVYGRAPKPGLDFFPLT
VNYQEKTFAAGKIPGGYFKREGRPSEKETLVSRLIDRPIRPLFVKGFKNETQVVVTVLQH
DMENDPDVLGMVAASAALTISGVPFMGPIGAARVGLIDGELVLNPAIDLIPSSDLDLVVA
GTQDALMMVESEAKELSEEKMLEALMFAHAGMQPVIDAIIELAEHAAKEPFDFQADDHSD
VVASIKSLVGEDIKSAYTHAGKYERRSGVDAAKKAAAAKLVKTDENPDGVDGSKFSAAFK
ECEAEVLRRDIIENAHRVDGRALDKVRAIVSEVGVLPRTHGSALFTRGETQALVVATLGT
GEDEQYIDSLQGTYKENFLLHYNFPPYSVGEAGRMGSPGRREIGHGKLAWRAIRPMLPTK
EDFPYTIRLVSEITESNGSSSMATVCGSSLALMDAGVPLIRPVSGIAMGLILEPSGEFAI
LSDILGDEDHLGDMDFKVAGTSEGITSLQMDIKVAGITKEIMKQALTQASAGRLHILDEM
SKAMDAPRAELGEHAPKIETIKIPVDKIREVIGSGGKVIREIVEKTGAKIDIGDDGTIKV
AANDQEKIDAAKAWIQSIASEPEVGTIYSGKVVKVVDFGAFVNFFGAKDGLVHVSQIALE
RVANPADVLSEGQEVKVKFLGFDDRGKTKLSMKVVDQATGEDLTAKINAERAERGEEPLS
EDTGGRPKRDGGDRGGDRGRRRRD
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacatcaaacgcaagacgatcgactgggccggccgcccgctgaccctggaaacg
ggccgcatcgcccgccaggccgacggcgccgtgctggcgacctacggcgagaccgtggtt
ctggccaccgtcgtctatggccgcgcgcccaagcccggcctggatttcttccccctgacg
gtcaactaccaggaaaagaccttcgccgccggcaagatcccgggcggctacttcaagcgt
gaaggccgtccgtccgagaaggaaaccctggtttcccgccttatcgaccgtccgatccgc
ccgctgttcgtcaagggcttcaagaacgagacccaggtcgtcgtgaccgtgctgcagcac
gacatggaaaacgatcccgacgttctgggcatggtcgccgcctcggccgccctgaccatc
tcgggcgtgcccttcatgggccccatcggcgccgcgcgcgtcggcctgatcgatggcgag
ctggtgctgaaccccgccatcgacctgatcccgtcctcggacctcgacctggtggtcgcc
ggtacgcaagacgccctgatgatggtcgaatccgaagccaaggagctgtcggaagagaag
atgctcgaggccctgatgttcgcgcatgcgggcatgcagccggtgatcgacgccatcatc
gaactggctgaacacgccgccaaggagcccttcgacttccaggccgacgatcactccgac
gtcgtcgcctcgatcaagtcgctggtcggcgaagacatcaagagcgcctacacccacgcc
ggcaaatacgagcgccgttcgggcgtcgacgcggccaagaaagccgccgccgccaagctg
gtgaagaccgacgagaaccccgacggcgtcgacggttccaagttctcggccgccttcaag
gagtgcgaagccgaagtcctgcgtcgcgacatcatcgagaacgcgcaccgcgtcgacggc
cgcgccctcgacaaggtccgcgccatcgtgtcggaagtcggcgtcctgccgcgcacccac
ggttcggccctgttcacgcgtggggaaacccaggccttggtcgtcgccaccctcggcacc
ggcgaggacgagcagtacatcgacagcctgcagggcacctacaaagagaacttcctgctg
cactataacttccccccctattcggtgggtgaagcgggccgcatgggttcgcccggccgt
cgcgaaatcggtcacggcaagctggcctggcgcgcgatccgtccgatgctcccgaccaag
gaagacttcccctacaccatccgcctggtctccgagatcaccgagtcgaacggctcgtcc
tcaatggccacggtctgcggttcgtcgctggccctgatggacgccggcgtgccgctgatc
cgtccggtctcgggcatcgccatgggcctgatcctggagccgtcgggcgagttcgccatc
ctgtcggacatcctgggtgacgaagaccacctgggcgacatggacttcaaggtcgccggc
acgtcggaaggcatcaccagccttcagatggacatcaaggtcgccggcatcaccaaggag
atcatgaagcaggccctgacgcaggcttcggccggtcgcctgcacatcctggacgagatg
tccaaggccatggatgcgccgcgcgccgaactgggtgaacacgcgcccaagatcgaaacg
atcaagatccccgtcgacaagatccgtgaagtcatcggttcgggcggcaaggtcatccgc
gagatcgtcgagaagaccggcgccaagatcgacatcggcgatgacggcaccatcaaggtc
gccgccaacgaccaggagaagatcgacgctgccaaggcctggatccagtccatcgcctcg
gagccggaagtcggaaccatctactccggcaaagtcgttaaggtcgtcgacttcggcgcc
tttgtgaacttcttcggcgccaaggacggcctggtccacgtgtcccagatcgctctggaa
cgcgtcgccaacccggccgacgtcctgtcggaaggccaagaggtgaaggtcaagttcctg
ggcttcgacgatcgcggcaagaccaagctgtcgatgaaggtcgtcgatcaggccacgggt
gaagacctgacggccaagatcaacgccgagcgcgccgagcgcggcgaagagcccctgtcg
gaagacaccggcggtcgtccgaaacgtgacggcggggatcgcggtggcgatcgcggacgt
cgtcgtcgcgactaa
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