Mycetohabitans rhizoxinica: RBRH_00090
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Entry
RBRH_00090 CDS
T01355
Name
(GenBank) Exonuclease family protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
brh
Mycetohabitans rhizoxinica
Pathway
brh03030
DNA replication
brh03430
Mismatch repair
brh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
brh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RBRH_00090
03430 Mismatch repair
RBRH_00090
03440 Homologous recombination
RBRH_00090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
brh03032
]
RBRH_00090
03400 DNA repair and recombination proteins [BR:
brh03400
]
RBRH_00090
Enzymes [BR:
brh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RBRH_00090
DNA replication proteins [BR:
brh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RBRH_00090
DNA repair and recombination proteins [BR:
brh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RBRH_00090
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
CBW74191
UniProt:
E5ANK9
LinkDB
All DBs
Position
633697..634542
Genome browser
AA seq
281 aa
AA seq
DB search
MRRATTTRGFGHFRRQWARLRSLCHCCIAMTDLASLIHDADARPLAFVDLETTGGRPGLD
RITEVGVIEVDRDGVRRWSTLVDPLQPIPPFVQQLTGITDAMVRGAPTFDALAAELARRL
DGKLFIAHNARFDHGFLKKAFEQIGIRFDPDVLCTVRLSRALFPRESRHGLDALAQRLDL
SACGRHRALADADLVWQFWQRVHALHPRPAIEAALRRLIRGGGGRRDDRCVAGRFGRLRI
VRQRRRAVVCRQERQAAATRAYAVVWRAPLEPRCATGRACA
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
gtgcgccgtgcaacgacgacgcgcggattcggtcatttcaggcgacaatgggcgcgtttg
cgttccttatgccactgttgcattgccatgaccgaccttgctagcctgatccacgatgcc
gatgcacgaccactcgcgtttgtggatttggagacgacgggcgggcgccctggactcgac
cgcatcaccgaggtgggcgtgatcgaagttgaccgtgatggcgttcgccgctggagcacg
ctggtcgatccgctgcagcctatcccgccatttgtgcagcagttgaccggtatcacggac
gcgatggtccgcggtgcaccgacatttgatgcgctcgccgctgaactcgcgcgccgactc
gatggcaagttgtttatcgcgcacaacgcgcgctttgatcacgggttcctgaagaaagcg
ttcgaacagatcggcatccgcttcgatcccgatgtactgtgcacggtgcggctgtcccgc
gccctgtttccgcgcgaaagccggcacgggctcgacgcactcgcgcagcggctggacctg
agcgcgtgtggtcggcatcgggcgctggctgacgctgatttggtgtggcagttttggcag
cgtgtccatgccctgcatccacgccccgccatcgaggcagcgctgcgccgcctgattcgc
gggggcgggggccgacgcgatgaccgatgcgttgccggccggttcgggcgtctacgcatt
gttcgacagcgacggcgtgccgttgtatgtaggcaagagcgccaagctgcggcaacgcgt
gcgtatgcagttgtttggcgagcgccgctcgagccgcgatgcgcaactggccgcgcgtgt
gcatga
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