Mycetohabitans rhizoxinica: RBRH_00395
Help
Entry
RBRH_00395 CDS
T01355
Name
(GenBank) Sigma-54-dependent transcriptional activator
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
brh
Mycetohabitans rhizoxinica
Brite
KEGG Orthology (KO) [BR:
brh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
brh03000
]
RBRH_00395
Transcription factors [BR:
brh03000
]
Prokaryotic type
Helix-turn-helix
Other families
RBRH_00395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
AAA_5
PAS_4
Mg_chelatase
PAS
PAS_8
AAA_16
AAA_2
AAA
AAA_7
HTH_50
DUF134
AAA_3
PAS_7
ADH_zinc_N
CUE
NACHT
Motif
Other DBs
NCBI-ProteinID:
CBW76476
UniProt:
E5ATQ2
LinkDB
All DBs
Position
pBRH01:55052..57109
Genome browser
AA seq
685 aa
AA seq
DB search
MARVSILKSGVSFMRCDAHNVVSPICGITNWGKWALSIVQPDAVARPRLWAMGISRLRDL
FLDIAREYDGRAQLRVVSRGFEDAVHEINVAGSMRPDVVVAGGSNGAYLKARVNVPVVLI
HPTGFDVMHALAQARRDAALVALVTHGDIPDEVRQFTHAYGVDVVLGSYRSVQDAQACVQ
DLRERGVGAVVGPGLVADLAAHAGMHAVFLYSRACVRAAFDTALEVVQATRAEALRRARL
DNLLQHLRDGVVALDAEGRVEAMNQRLSDALGIGATQAAGRTLLDLAPCLADSLPDADGD
TLSVIRGVSYVVHRGPLAGPCGEQGGTVLTFQESRAVERLDRTLRSRPRAQQLTARYDLD
DLVGECAPIERVRVLVRRYARSDATVLVLGESGTGKEMVAQSIHRLSARRDFAFVAINCG
AFPEALLESELFGYEEGAFTGARRGGKVGLIEAAHRGTLFLDEIGEMSLPLQSRLLRVLQ
EREVVRLGSTEPVRVDIRVIAATHRALIDGIESGTFRADLYYRLNILSIALPPLRERPGD
VMLLAVEWLLQAARREPRLAVRVPDTNEATRILAPVAAPLCAYRWPGNVRELQNVIERIA
VELADTEAEDDVALTVAVLRTIAPELFDTPAGPVVPASTLRERSRHVEADEIRAALKAHD
GDRDAACQALGISKTTLWRKLNAAR
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
gtggcccgagtttcaatattgaaatcaggcgtttcgtttatgagatgcgacgcgcataat
gtggtatcaccaatttgcggtatcaccaattggggtaaatgggctttgagcatcgtacaa
ccagacgcggtcgctcgcccgcgtttgtgggccatgggaataagtcgattgcgtgacttg
ttcctggacatcgcccgcgagtatgacgggcgtgcgcaactgcgcgtggtctcgcgcggt
ttcgaagacgcggtgcatgagatcaatgtggccggctcgatgcgtccggacgtggtagtg
gccggtggatcgaacggcgcgtatttgaaagcgcgcgtgaacgtgccggttgtgctgatc
catcccaccggtttcgacgtgatgcatgcgctggcgcaggcacggcgcgacgcggcattg
gtcgcgctggttacacacggcgatattcctgacgaggtccggcagttcacgcatgcctac
ggcgttgacgtggttctcggctcgtatcggtcggtgcaggatgcgcaggcctgcgtgcag
gacttgcgtgagcgtggcgttggcgcggtggtcgggcccggcctggtcgcggatcttgcc
gcccacgccggcatgcatgcggtatttctgtactctcgcgcctgcgtgcgtgccgctttc
gataccgcgctggaagtcgtgcaggccacgcgtgccgaggcactgcgccgcgcccggctg
gataacctgctgcagcacctgcgcgacggagtggtggcgctcgatgccgaaggacgcgtc
gaggcgatgaaccaacgactgtctgacgcgctcggtatcggcgccacgcaggcggcgggg
cgcacgctgctggatttggcgccgtgcctggccgattcgctgcccgacgccgacggcgat
acgctcagcgtcatccgtggggtgagctatgtcgtgcatcgcggcccgctcgccggcccc
tgcggcgagcagggcggcaccgtgctgacgttccaagagtcgcgcgcggtagagcggctg
gatcgcacgttgcggtcacggccgcgtgcgcagcaattgaccgcccgttacgatctggac
gacctggtcggcgaatgcgcgcccatcgagcgcgtgcgcgtgctggtgcgtcgttatgca
cgctcggacgcgaccgtgctcgtgctcggcgaaagcggcaccggcaaggaaatggtcgcc
cagagcatccaccgcctgagtgcgcggcgcgatttcgcgttcgtggctatcaactgcggt
gcctttccggaggcgctgctcgaaagcgaactgttcggctacgaagagggcgccttcacc
ggcgcgcgcagggggggcaaggtgggcctgatcgaagccgcgcatcgtggcactttattc
ctggacgagatcggcgagatgtcgttgccgttgcaaagccgtttgctgcgggtgctccag
gagcgcgaagtggtgcgtctgggttcgaccgagccggtgcgcgtcgatatccgcgtgatc
gccgccacgcaccgtgcgttgatcgatggcatcgagtcgggcacattccgcgctgatctt
tattatcggctgaatatcttgagcattgcgctgccaccgttgcgtgagcgtcctggtgat
gtgatgctgctcgcggtggaatggctgctgcaggcggcgcggcgcgagccccgcctggcc
gtgcgtgtgccggataccaacgaggcaacccgaatactggcgccggtggccgcgccgctg
tgcgcgtaccgatggcccggcaacgtgcgcgaactgcagaacgtcatcgagcggatcgcg
gtcgaattagccgataccgaggccgaggacgatgttgcgctgaccgtggccgtgctgcgc
acgatcgcgcccgagttgttcgacacgccggctggtcccgtcgtgcccgcctcgacgctg
cgtgaacgtagccgccatgtcgaggcggacgagatccgtgccgcgttaaaggcccatgat
ggtgatcgcgatgcagcatgccaggcgttgggcatcagcaagacgacactgtggcgcaaa
ctcaatgccgcgcgataa
DBGET
integrated database retrieval system
