Mycetohabitans rhizoxinica: RBRH_00972
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Entry
RBRH_00972 CDS
T01355
Name
(GenBank) tRNA (5-carboxymethylaminomethyl-2-thiouridylate) synthase
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
brh
Mycetohabitans rhizoxinica
Brite
KEGG Orthology (KO) [BR:
brh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
brh03016
]
RBRH_00972
Transfer RNA biogenesis [BR:
brh03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
RBRH_00972
Prokaryotic type
Methyltransferases
RBRH_00972
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
AIG1
GTP_EFTU
Ras
Roc
MCM
Motif
Other DBs
NCBI-ProteinID:
CBW76404
UniProt:
E5ANF1
LinkDB
All DBs
Position
complement(2750301..2751782)
Genome browser
AA seq
493 aa
AA seq
DB search
MRIFANAYRAIQWTPVVIGGHPYCRTYLFELMQTDSDPIVAIATAPGRGGIGVVRVSFGA
AGADAAVRLMDALFRDRLAPRRAVYVPFFDAAGVPLDRGIGLYFPAPHSYTGEHVVELQG
HGGPVVLQLVLQRCLDAGCDIGLRLAQPGEFTRRAFLNDKLDLAQAEAVADLIEASTEAA
ARSAGRSLEGAFSRDIHRLVDEVVGLRMLVEATLDFPEEEIDFLEAADARGKLARIRDAL
AAVQRDAKQGALLREGLSVVLAGQPNVGKSSLLNALVGAELAIVTPIAGTTRDKVAQTIQ
IEGIPLHVIDTAGLRDTQDEVERLGIARSWNEIERADVVLHLLDARDGMSVEDHAIAARF
PAGVPVVRIFNKIDLAGVEPDVRDAGDSAAREVRLSAKAALGIDLLRAELLRIAGWQAGA
ESVYLARERHLRALRAAGEHLATAAEHAARNAQALDLFAEELRLAQEQLNSITGEFTSDD
LLGVIFSRFCIGK
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcatcttcgcgaacgcatatcgcgcgatacaatggacgccagtcgttatcggcggc
cacccgtattgccgcacctatttattcgagttaatgcaaaccgattctgatccgatcgtc
gcgattgccaccgcgccgggacgtggtggcataggggtggtgcgtgtctcgttcggcgcg
gccggggccgacgcggctgtgcggctgatggacgcattgtttcgcgatcggcttgcaccc
cgccgtgccgtctatgtgccgtttttcgatgcggctggcgtgccactggatcgcggcatt
ggcctgtatttcccggcgccccattcgtacaccggcgagcacgtcgtcgagcttcagggg
catggtgggccggtcgtattgcaactcgtgctgcagcgatgtctcgacgccggctgcgac
atcgggctgcggctcgcgcagcccggcgaattcacgcgacgcgcgttcctgaacgacaag
cttgatctcgcgcaggccgaagccgtggcggacctaatcgaagccagtaccgaggcggcc
gcgcgctcggccggccgttcgttggaaggagcattttcgcgcgacatccatcggctggtt
gacgaggtcgtcggcctgcggatgctggtcgaggccacccttgatttcccggaggaggaa
atcgattttctggaggctgccgacgcgcgcggcaagctggcgcgtatccgcgatgcattg
gcggctgtgcagcgcgatgcgaaacaaggcgcattgctgcgcgaggggctgtccgtcgta
ctggccgggcagccgaacgtcggcaagtcctcgctgcttaatgcgctggtgggtgccgag
ctggcgatcgtgaccccgattgccggcacgacgcgggacaaggtggcgcagaccatccag
atcgaaggcataccgctgcacgtgatcgatactgctggcctgcgcgatacgcaagacgaa
gtggagcggctcggtattgcgcggtcatggaacgagatcgagcgagcggatgtcgtactg
cacctgctggatgcgcgtgatgggatgagcgtggaggatcacgcgatcgccgcgcggttc
cccgccggtgtgccggtggtgcggatcttcaacaagatcgacctggcaggcgtcgagccg
gacgtgcgcgatgccggggatagtgcggcgcgcgaggtcaggttatccgcaaaggcggcg
ctcggtatcgacctgctgcgggctgaactgctgcgcattgccggatggcaagcaggcgcg
gaaagtgtctatttggcgcgcgagcgtcatttgcgcgcgttgcgtgcagcgggcgagcat
ttggcgacggctgcggagcacgcggctcgcaatgcgcaggcgctcgatctatttgccgag
gagttgcgactggcgcaggaacaattgaactcgatcaccggtgagttcacgtcggatgat
ttgctgggggtgatctttagccggttctgtattggaaagtaa
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