Mycetohabitans rhizoxinica: RBRH_01169
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Entry
RBRH_01169 CDS
T01355
Name
(GenBank) DNA polymerase I (EC 2.7.7.7)
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
brh
Mycetohabitans rhizoxinica
Pathway
brh03030
DNA replication
brh03410
Base excision repair
brh03420
Nucleotide excision repair
brh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
brh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RBRH_01169
03410 Base excision repair
RBRH_01169
03420 Nucleotide excision repair
RBRH_01169
03440 Homologous recombination
RBRH_01169
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
brh03032
]
RBRH_01169
03400 DNA repair and recombination proteins [BR:
brh03400
]
RBRH_01169
Enzymes [BR:
brh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RBRH_01169
DNA replication proteins [BR:
brh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
RBRH_01169
DNA repair and recombination proteins [BR:
brh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
RBRH_01169
NER (nucleotide excision repair)
GGR (global genome repair) factors
RBRH_01169
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
CBW74494
UniProt:
E5APG2
LinkDB
All DBs
Position
897603..900386
Genome browser
AA seq
927 aa
AA seq
DB search
MVIMLENRNLEGKTLLLVDGSSYLYRAYHAMPDLRGPDGGPTGALYGLINMMRRLRRDIP
AEYSACVFDAKGKTFRDDWYADYKAHRPPMPEDLARQIEPIHVAVRALGWPLLMIERVEA
DDVIGTLAVRAAQAGMNVVVSTGDKDLAQLVNERVTLINTMTNERLDRDGVIAKFGVPPE
RIVDYLTLIGDTVDNVPGVDKCGPKTALKWLAQYQTLDGIIEHANDIKGAVGDNLRRALA
FLPTARRLVTVHTECDLSPQVQSIATSLQARAEAKDELRDIYLRHGFKTWLRELDSEAGP
DTFTATADGGVALGPGAVEPAPATDIERQYETVNAWEQFERWLAVIEAAPLTSFDTETTS
LDPMRARIVGVSFATEPGRAAYVPLAHRGPDHPVQLPRDEVLARLKPWLESPAHKKVGQH
LKYDAQVLASHGITLAGIEHDTLLESYVLESHRPHDMDNLATRHLGVKTIKYEDVAGKGA
AQIGFDEVSVDVATEYSAEDADITLRLHQVLYPQIQVEKGLDYVYRSIELPTARVLQIIE
RNGVLIDKDRLVAQSNELGIRMLELQAEAYALAGGEFNLNSPKQIGEIFFQQLQLPVVKK
TPSGAPSTDEDVLQKLAEDYPLPKVLLDYRALTKLKSTYTDKLPKMINPDTGRVHTNYAQ
AVAVTGRLASNDPNLQNIPVRTPEGRRIREAFIAPPGSSIVSADYSQIELRIMAHISGDA
SLMAAFEHGEDVHRATASEIFGVTRQEVTSEQRRIAKVINFGLIYGMSAFGLASNLGIAR
DAAKLYIDRYFARYPGVARYMDETRMEAKSCGFVQTVFGRRLWLPEINGGNGPRRQAAER
AAINAPMQGTAADLIKLSMITVQDWIERARVKSRLIMQVHDELVLEVPDDELEIIRAKVP
ELMCSVAQLNVPLVAELGTGANWEEAH
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
ttggtcataatgcttgaaaatcgaaacctcgaaggcaagaccctgctattggtcgatggt
tcgagctatttataccgggcctaccatgcgatgccggatttgcgcgggccggacggtggc
ccgaccggtgcgctgtacggtctcatcaacatgatgaggcgattgcgtcgcgacattccc
gcagagtatagcgcgtgcgtgttcgatgccaagggcaagacgtttcgcgatgactggtat
gcggactacaaggcgcatcgtccgccgatgcccgaggacttggcccgacagatcgagccg
atccacgtcgcggtgcgcgcgctcggctggccgctgttgatgatcgagcgcgtggaggcc
gacgacgtgatcggcacgctggcggtgcgcgccgcgcaggccggcatgaacgtggtggtg
tccacgggcgataaggacctcgcgcaactggtgaacgagcgcgtcacgctaatcaatacg
atgaccaacgagcggctcgatcgcgacggcgtgatcgcgaagttcggcgtgcctcccgag
cgtatcgtcgactatctgacgttgatcggcgataccgtcgacaacgtgccgggcgtggac
aagtgcggaccgaagaccgcgctcaaatggctcgcgcagtatcagacgctggacggcatc
attgagcacgcgaacgatatcaagggcgcggtcggcgacaacctgcgtcgtgcgctcgcg
ttcctgcccaccgcgcgccgactcgtcaccgtgcataccgaatgcgacctgtccccgcaa
gtgcagtccatcgccacgtcgctgcaggcacgggcagaagccaaggatgaattgcgcgac
atttatttgcggcacggcttcaagacgtggttgcgcgagcttgacagcgaggccgggccc
gatacgttcacggccacggccgacggtggggtcgcgctcggcccgggcgcggtcgagccg
gcgccggcaaccgacatcgagcggcagtacgaaaccgtcaacgcatgggagcagttcgag
cggtggctggcggtgatcgaggcggcgcccctcacgtcgtttgacaccgagactacgtcg
ctggacccgatgcgcgcgcgtattgtcggcgtatcgtttgcgaccgagcccgggcgcgcc
gcctatgtcccgctcgcgcaccgcgggccggatcacccggtgcaactgccgcgcgacgag
gtgctcgcgcggctcaagccgtggctggagagccccgcgcacaagaaggtgggccagcat
ctaaagtatgatgcacaggtcttggcgagtcatggcatcacgctggccggcattgagcat
gatacgctgctcgaatcgtatgtgctcgaatcacaccgtccgcacgacatggacaatctt
gcgacgcggcacctcggcgtaaagacgatcaagtacgaggacgtcgccggcaagggcgcg
gcgcaaatcggcttcgacgaggtctcggtggacgtggccaccgaatattccgccgaggat
gccgatatcacgttgcggttgcatcaggtgctgtatccgcagatccaggtcgagaaaggg
ttagattacgtttatcgatcaatcgagctgccgacggcgcgcgtactgcagatcatcgag
cgcaacggcgtgctgatcgataaggaccggctcgttgcgcagagcaacgagcttggcatc
cggatgctggagttgcaggccgaggcgtacgcactagctggcggcgagttcaatttgaat
tcgccgaagcagatcggcgagatcttcttccagcagttgcagttgccggtggtcaagaag
accccgtcaggcgcgccgtccaccgacgaggacgtattgcagaagcttgccgaggactat
ccgctgccgaaggtgttgctcgactaccgtgcgttgaccaagcttaagtcgacctatacg
gacaagctgccgaagatgatcaacccggacaccggccgcgtgcataccaactatgcccag
gcggtggccgtgaccgggcggcttgcgtctaatgatccgaatctgcagaacatcccggtt
cgcacgccggaagggcggcgcatccgcgaagcgttcatcgcaccgccgggcagcagcatc
gtctcggccgactactcgcagatcgagctgcgtatcatggcgcacatctcgggcgacgcg
tcgctgatggcagccttcgagcacggcgaagatgtgcaccgcgcgaccgcgtcggaaatc
ttcggcgtgacgcggcaggaggtcacgagcgagcagcggcgcatcgcaaaagtcatcaat
ttcggcttgatctatgggatgagcgcgtttggccttgcatcgaatctgggcattgcgcgc
gacgcggccaaactctatatcgaccgctattttgctcgttacccgggggtcgcgcggtat
atggacgagacgcggatggaggcgaagtcgtgcggtttcgtccagaccgtgtttggtcgc
cggctgtggctgccggagatcaacggcggcaatggtccgcgccgtcaggccgccgagcgc
gccgcgattaacgcgccgatgcaagggaccgcggccgatttgatcaagctgtcaatgatc
accgtgcaggattggatcgagcgcgcgcgcgtgaagtcgcgattgatcatgcaggtccac
gacgaactggtgctagaggtgcccgacgatgaattggagatcatccgcgccaaggtgccc
gaactgatgtgttcggtcgcccagctcaacgtgccgctagtcgccgaattgggcacgggc
gccaactgggaggaagcgcattga
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