Mycetohabitans rhizoxinica: RBRH_01486
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Entry
RBRH_01486 CDS
T01355
Name
(GenBank) 60 kDa chaperonin GROEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
brh
Mycetohabitans rhizoxinica
Pathway
brh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
brh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RBRH_01486
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brh03019
]
RBRH_01486
03110 Chaperones and folding catalysts [BR:
brh03110
]
RBRH_01486
03029 Mitochondrial biogenesis [BR:
brh03029
]
RBRH_01486
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
brh04147
]
RBRH_01486
Enzymes [BR:
brh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
RBRH_01486
Messenger RNA biogenesis [BR:
brh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RBRH_01486
Chaperones and folding catalysts [BR:
brh03110
]
Heat shock proteins
HSP60 / Chaperonin
RBRH_01486
Mitochondrial biogenesis [BR:
brh03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
RBRH_01486
Exosome [BR:
brh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RBRH_01486
Exosomal proteins of other body fluids (saliva and urine)
RBRH_01486
Exosomal proteins of breast cancer cells
RBRH_01486
Exosomal proteins of colorectal cancer cells
RBRH_01486
Exosomal proteins of bladder cancer cells
RBRH_01486
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Phage_GP20
Motif
Other DBs
NCBI-ProteinID:
CBW75891
UniProt:
E5AKT4
LinkDB
All DBs
Position
complement(2288833..2290476)
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKDVVFSDSARAKMVEGVNILANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEI
ELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVASRNRSLREGMKYVASGMNPMDLKRG
IDKAVAAAVDELRKISKPCTTSKEIAQVGSISANSDTSIGERIAEAMDKVGKEGVITVED
GKSLADELEVVEGMQFDRGYLSPYFINNPDKQVAVLENPYVLLHDKKISNIRDLLPVLEQ
VAKASRPLLIIAEDVEGEALATLVVNNIRGILKTVAVKAPGFGDRRKAMLEDIAILTGGQ
VIAEETGLSLEKATLQELGQAKRIEVAKENTTIIDGAGEAKNIEARVKQIRTQIEEATSD
YDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVAL
IRARTAIASVKGENADQEAGIKIVLRAMEEPLRQIVANGGEEASVVVAAVAAGKGNYGYN
AASGEYGDLVEAGVVDPTKVTRTALQNAASVAGLLLTTDAAVCELPKEDAPAPAGMPGGM
GGMGMDM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgttgtgtttagcgattccgcccgtgcgaagatggtcgagggcgtg
aacattctcgccaacgcagtgaaggtgacgctcggcccgaagggccgcaatgtcgtgctc
gagcgcagcttcggcggcccgacggtgaccaaggacggtgtgtccgtcgcgaaggaaatc
gagctgaaggacaagctgcagaacatgggcgcgcaaatggtcaaggaagtggcttccaag
accagcgataacgccggtgacggtacgacgacggcgaccgttgcatcgcgcaatcgatcg
ttgcgcgaaggtatgaagtatgtcgcctcgggcatgaacccgatggacctgaagcgtggt
atcgacaaggcggttgccgccgcagtcgacgagctgcgcaaaatcagcaagccgtgcacg
acgagcaaggaaatcgcgcaagtcggctcgatctcggccaatagcgacacgtcgatcggc
gagcgcatcgctgaagcgatggacaaagtcggcaaggaaggtgtgatcaccgttgaagac
ggcaagtcgctcgccgacgaactcgaagtcgtcgaaggcatgcaatttgaccgcggctac
ctgtcgccgtacttcatcaacaacccggacaagcaagtcgccgtcctcgagaacccgtac
gtgctgctgcatgacaagaagatctcgaacatccgcgacctgctgccggtgctcgaacaa
gtggccaaggccagccgcccgctgctgatcatcgcggaagacgtcgaaggcgaagcgctt
gcgacgctggtggtgaacaacatccgcggcatcctgaagaccgtcgcggtcaaggcgcct
ggcttcggcgatcgtcgtaaggcgatgctcgaggacatcgcgatcctgaccggtggccag
gtcatcgccgaggaaaccggcctgtcgctggaaaaggctacgctgcaggagctgggccaa
gccaaacggatcgaagtcgcgaaggaaaacacgacgatcatcgacggcgcgggcgaagcg
aagaacatcgaggcgcgtgtgaagcagatccgcacgcaaatcgaagaagcgacgtcggac
tacgatcgcgaaaagctgcaagagcgtgtcgcgaagctcgcgggcggcgtggcagtgatc
aaggtcggcgcggccaccgaagtcgaaatgaaggaaaagaaggcgcgtgtcgaagacgcg
ctgcacgccacgcgtgccgccgttgaagaaggcatcgtgccgggcggtggcgtcgcgctg
atccgtgcccgcactgcgatcgccagcgtcaagggcgagaacgccgaccaagaggccggt
atcaagatcgtgctgcgtgcgatggaagagccgctgcgccagatcgtggcgaacggcggt
gaagaggccagcgtggtggtcgcggctgtggcggccggcaagggcaactacggctacaac
gcagcgagcggcgagtacggcgacctggtcgaggccggcgtggtcgatccgacgaaggtc
acgcgcaccgcgctgcaaaacgcggcgtccgttgctggtctgctgctgacgactgatgcg
gcggtgtgcgagctgccgaaggaagacgcaccggcaccggccggcatgccgggcggcatg
ggtggcatgggcatggacatgtaa
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