Mycetohabitans rhizoxinica: RBRH_01796
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Entry
RBRH_01796 CDS
T01355
Name
(GenBank) DNA topoisomerase I (EC 5.99.1.2)
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
brh
Mycetohabitans rhizoxinica
Brite
KEGG Orthology (KO) [BR:
brh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
brh03032
]
RBRH_01796
03400 DNA repair and recombination proteins [BR:
brh03400
]
RBRH_01796
Enzymes [BR:
brh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
RBRH_01796
DNA replication proteins [BR:
brh03032
]
Prokaryotic type
DNA Topoisomerases
RBRH_01796
DNA repair and recombination proteins [BR:
brh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RBRH_01796
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF2474
Motif
Other DBs
NCBI-ProteinID:
CBW76916
UniProt:
E5AUZ2
LinkDB
All DBs
Position
pBRH01:534062..535162
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AA seq
366 aa
AA seq
DB search
MPGTPAPTATQATPRRRQRPAPDADACEQLRYVSDTQPGYTRRAVNGRFAYFDTRGTRIR
DRARIERINALAIPPAYTDVWICPDPYGHLQATGRDARGRKQYRYHAAWRMMRDTHKYAR
MADFARALPKIRTRVTRDLQRPGMPREKVAAALVRLLDRTLVRIGSPEYARENRSYGLTT
LRKQHLALDADRMRLRFRGKSGVEHDVDIDDPRIVRVVRRCMDLPGHELFQYVDECGERH
AIGSTDINAYLREISGTGFTAKDYRTWAGSVLALGVLRQIPPCNLTSARRHVVDTVRQVA
DLLRNTPAVCRKCYIHPVVLEAFETGTLATLEPLRQHRRLKADEALFASLLHHHARTARA
GSRRTR
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgcctggcacaccggcccccactgcaacacaagccaccccgcgtcgccggcaacgcccc
gcgcccgatgccgatgcgtgcgagcagttgcgctacgtgagcgacacgcagcccggctat
acgcgccgtgcggttaacggccggttcgcgtactttgacacacggggcacgcgcattcgc
gatcgcgcgcgcatcgagcgcattaatgcgttggcgataccgcccgcgtataccgacgtg
tggatctgcccggacccatacggtcacttgcaagccactggccgtgacgcgcgcgggcgt
aagcaataccgctatcacgccgcgtggcgcatgatgcgtgacacacacaaatacgcacgg
atggccgactttgcgcgggcgttgccgaagatccgcacgcgcgtgacgcgggacctgcag
cgcccggggatgccacgcgaaaaagtggccgcggcgttggtacggctgctcgaccgtaca
ctggtgcggatcggcagccccgagtacgcacgtgaaaaccggtcctacggcttgacgacc
ctgcgcaagcaacacctagcgctcgacgccgaccgcatgcggctgcggtttcgtggcaag
agcggcgtcgagcacgacgtcgacatcgacgacccacgtatcgtgcgcgtcgtgcgacgc
tgcatggacctgcctggccatgaactattccagtatgtcgacgagtgcggcgagcggcac
gctatcggctcgaccgacattaatgcgtacctgcgcgagataagcggaacagggttcact
gccaaggactacagaacgtgggcgggtagcgtccttgcacttggcgtgttgcgccaaatt
ccgccatgcaatctcacgagcgcgcgccggcatgtggttgacacggtccgtcaggtcgcc
gatctactgcgcaacacgcctgccgtatgccgtaaatgctatatccatcccgtagtgctc
gaggctttcgaaacaggtacgcttgccacacttgagccgctgcgccagcaccggcgcctg
aaggccgacgaagcgctgttcgcctccctgcttcaccatcacgcgcgtacagcccgcgca
gggtcgcgccgtacccgatga
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