Mycetohabitans rhizoxinica: RBRH_02797
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Entry
RBRH_02797 CDS
T01355
Name
(GenBank) Uracil DNA glycosylase superfamily protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
brh
Mycetohabitans rhizoxinica
Pathway
brh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
brh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RBRH_02797
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brh03400
]
RBRH_02797
Enzymes [BR:
brh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RBRH_02797
DNA repair and recombination proteins [BR:
brh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RBRH_02797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
CBW77032
UniProt:
E5AVA8
LinkDB
All DBs
Position
pBRH01:636366..637190
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AA seq
274 aa
AA seq
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MPHARIRGPTITSPLRDCFLQSTGKNAWRVHGIWSTATRDRRHASCKRVARSFVMTERMM
TTRKPTTQEHGKIEIEPHQQPQGLDDCRRCALWHDASQPVPGEGPAHAPIMMVGEQPGDQ
EDRQGRPFVGPAGVLLDDALREAGVARDDVYVTNAVKHFKWEPRGKRRMHKTPAQREIEA
CHYWLDREFDTVAPAVVVALGATALKAVLQDRTVTLQRSLGQTIEYGGHFVIPTYHPSFA
LRAPDEPTRQRAYAQIVDALRRAGKLAQQLEQQG
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
gtgccgcatgctcgcatacgcggccccactatcacgtcgccgttacgcgactgcttttta
caatccacaggcaaaaatgcatggcgtgtacacggcatctggagcacggcgacccgggac
cgcaggcacgcatcgtgcaagagggttgccaggagtttcgttatgaccgagcgcatgatg
accacgcgcaaaccgacgacgcaggaacacggaaagatcgaaatcgaaccgcaccagcag
ccgcaaggcctggacgattgccggcgctgtgcgctgtggcacgacgcgtcgcagccggtg
ccgggcgagggacccgctcatgcaccaatcatgatggtcggcgaacaacccggcgaccag
gaagatcgacaaggccggccatttgtcggtccggctggcgtactactggacgacgcgttg
cgcgaggccggcgttgcccgcgacgatgtctatgtgacgaatgccgtcaagcactttaaa
tgggaaccgcgcggtaagcggcgcatgcacaaaacgcccgcacagcgcgaaattgaagcg
tgccactactggctcgaccgtgaattcgatacggtcgcccccgcggtggtcgtcgctctt
ggcgcgacagcgctcaaagccgtgctgcaagatcggaccgtgacactgcagcgttcgttg
ggccaaacgattgagtacggcgggcactttgtcatcccaacttaccacccatcgtttgcc
ctacgggcgcccgatgagccgacgcgacagcgcgcctatgcgcaaatcgtcgacgcgctg
cggcgggcagggaagctggcacagcagctcgagcagcagggctag
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