Mycetohabitans rhizoxinica: RBRH_03201
Help
Entry
RBRH_03201 CDS
T01355
Name
(GenBank) Exoribonuclease II (EC 3.1.13.1)
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
brh
Mycetohabitans rhizoxinica
Brite
KEGG Orthology (KO) [BR:
brh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
brh03016
]
RBRH_03201
Enzymes [BR:
brh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
RBRH_03201
Transfer RNA biogenesis [BR:
brh03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
RBRH_03201
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
nSTAND1
Motif
Other DBs
NCBI-ProteinID:
CBW73894
UniProt:
E5AM17
LinkDB
All DBs
Position
350375..352483
Genome browser
AA seq
702 aa
AA seq
DB search
MNVFFEESGSFKAGTVLNRQGDAFQVELPGGRRAKVRSKDVLIEFDSPSAADLIQQADAA
AKEIDLDFLWEISPPDEFRFTDLANDYFGGTPDPVQKSALVLCMHGSPVYFRRKGRGQYQ
RAPEEQLKMALAALERRRQQAIVQQQYEDELKAGRLPAAFDGKVLGLLTRADKNSIEYKA
LEAAALALGKSAAQLMLDVGGIPSARALHEARFLSEYFPHGTGFPTLNAGPLPEDLGEAI
GVQAFSVDDVTTTEIDDAFSVQRLPHGRARIGIHIAAPALGIERGDAVDAIARARLSTVY
MPGDKITMLPDDFVGTFTLKEGGLRPALSLYLIIDTATQDIVMTETVAERVHVVSNLRHN
VLDEIITEQTLEAGAGDYPHKDEIAVLWPFAKALYERRQQARIGYGLRREVQRNIDYNFY
VDGEHVSITPRRRGSPLDLIVAELAILANSRWGAFLHEHGVPGIYRAQRAFGPNRTRMQT
TPAPHEGLGVAQYAWSTSPLRRYVDLVNQWQLLACVRHGVTAKLAAPFKPKDADLYAIVQ
NFDETYTAYADHQRRMEYFWCLRWLKQEKRDRVVATIVKDDVVRLEEVPLLLHVPGLGVQ
ARGTRVLLEVMAIDELRVEASCRLIEVLDVTRVTGGDETNEDADRALDTNSGTDMEAATG
HDVQVLGDASDASAKSGDAQPDAGAAVHGDVTHQRNDGEVAQ
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgttttttttgaggaatccggtagttttaaggctggcacagtattgaatcggcaa
ggtgacgcgttccaggtcgagttgccgggtgggcgtcgtgccaaggttcgcagcaaggac
gtgctgatcgagttcgacagcccgagcgccgccgacctgattcagcaggccgatgcggcg
gcgaaggaaatcgacttggatttcttgtgggaaatctctccaccggacgagtttcgcttc
accgacctagccaatgactatttcggtggcacgccggatcccgtgcaaaagagcgcgctg
gtactttgcatgcacggctcgccggtctacttccgacgtaaaggacgggggcagtaccag
cgcgcgcccgaagagcagttgaaaatggcgctcgcggcgctggagcggcggcgccaacag
gcgatcgtgcaacagcagtacgaggacgagcttaaagccggcaggctgcctgccgcgttc
gacggcaaggtgctcggcttgctcacgcgtgcggacaaaaattcgattgaatacaaggca
ctggaagcggctgcgctcgcattgggtaagtcggccgcgcaattgatgctggacgtcggc
ggcatcccgtcggcccgcgcgctgcacgaagcgcggtttctgtctgagtattttccacac
ggtaccggctttcccacgttgaacgcgggtccgttgccggaggacctgggtgaggcgatc
ggtgtgcaagcgttttccgtcgatgacgtgaccaccaccgagatcgacgacgccttctcg
gtccagcgcctgccgcacgggcgcgcaaggatcggtattcacatcgcggcgccggcgctg
ggcatcgagcgcggcgacgcggtggacgcgatcgcgcgtgcgcgcttgtcaaccgtttac
atgccgggcgacaagatcacgatgttgccggacgatttcgttggcacgttcacgctgaag
gagggcggattgcggccggcgttgtcgctatacctgatcatcgacaccgccacgcaggac
atcgtgatgactgagacggtggctgagcgcgtgcatgtggtcagcaacctgcggcacaac
gtgttggacgagatcatcaccgagcagacgctcgaggccggcgccggagactacccgcac
aaggacgagatcgcggtgctgtggcccttcgccaaggcgctgtacgagcgacgtcagcag
gcgcgtatcggctacggactcaggcgcgaggtgcagcgcaacattgactacaacttctac
gtcgacggcgagcatgtcagcatcacgccgcgccgtcgcggttcaccgttggacctgatc
gtggcggaactggcgatcctggccaatagccgctggggcgcgttcctgcatgagcatggc
gtgccgggcatctatcgcgcgcagcgcgcgttcggcccgaatcgcacgcggatgcagacc
acgccggcgccgcacgaagggcttggcgtggcgcagtatgcgtggagcacttcgccgctg
cgccggtatgtcgacttggtgaatcagtggcagttgctggcgtgtgtccggcatggcgtt
accgcgaagctggccgcgccgttcaagccgaaggacgcggacctgtacgccatcgtgcaa
aattttgacgagacctataccgcgtatgccgaccaccagcggcgcatggaatatttctgg
tgtctgcgctggctaaagcaagaaaagcgcgaccgggtggtggccacgatcgtcaaggac
gacgtcgtgcgactcgaagaagtcccgctgctattgcacgtgccggggttgggcgtgcaa
gcgcgcggcacgcgtgtgctgctcgaggtgatggcgatcgacgagctgcgcgtggaggcg
tcgtgtcggctcatcgaagtgctggacgtgacgcgtgtgacgggcggcgacgagacgaac
gaggacgcggatagggcgctggacacgaacagcggaacggacatggaagccgcgacgggt
catgacgtccaggtgctaggcgacgcgtccgatgcctcagcgaaatccggcgatgcacag
ccggatgcgggcgcggccgttcacggcgatgtgacgcaccagcgcaatgatggtgaggtg
gcgcaatga
DBGET
integrated database retrieval system
