Mycetohabitans rhizoxinica: RBRH_03272
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Entry
RBRH_03272 CDS
T01355
Name
(GenBank) Cell surface protein
Organism
brh
Mycetohabitans rhizoxinica
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YadA_anchor
YadA_stalk
Motif
Other DBs
NCBI-ProteinID:
CBW73826
UniProt:
E5ALF3
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Position
278922..284552
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AA seq
1876 aa
AA seq
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MRISDATPVIVYGAPFAHRSNYLRFALSRTLCALGVVTALLISDVARSATVESGTQDTLM
GEVASHNEGSSQPKGRKTRWDVKPPGMQDDMSVDEGAPHDKGSSEPKARRASRWDVKPPG
MQDDMSVDEGAPHDKGSSEPKARRASRWDVKPPDMQDDMSVDEGAPHGKGSSEPKARRAS
RWDVKPPGMQDDMSVDEGAPHGKGSSEPKARRASRWDVKPPGMQDDMSVDEGAPHDKGSS
EPKARRASRWDVKPPDMQDDMSVDEGAPHGKGSSELKARRASRWDVKPPGMQDDMSVGES
MPHGKGAIPSKVRETSRWDVKPSDKQDKRIDKVAPHDKGPSQPKGRKTRWDVKPPGMQDD
MSVDEGAPHGKGSSEPKARRASRWDVKPPGMQDDMSVDEGAPHDKGSSEPKARRASRWDV
KPPDMQDDMSVDEGAPHGKGTIPSKVRETSRWDVKPSDKQDTRIDKVAPHDKGSSELKAR
RASRWDVKPPGMQDDMSVDEGAPHGKGAIPSKVRETSRWDVKPSDMQDKLAPKRKQRPDV
TDGKPTEVGVRREKRMRERSHSVPIFLPSESSPSEVDRFSKRIRQADESLFVIAPQKDRG
ESGDSQKDTANQIDTGRLHPPVTGKGYTDGSIASLPSVQGANRIRQRSRSLSALSPEQEQ
RRLQVDTPLFILSPSPDGGDGDWNSLQQIRLHEPAWAQSAVSGVPPTNTHDMLIDETASH
DQGSRQPKVRESRLDVKPSTPVSDTENTLVSKGKWKQQLDVTPETPMEVGVQRKKRMRER
SHSVPIFLPSESSPSEADRFSKRIRQADESLFVIAPQKGSGKSGDSQKGTADQIDTGRLR
PSLKQPQFGDITGKATTDSGIALVPGKGANRTRQRSQSLPVLSPGLEQRRLQVDTPLFVL
SPSPDGGDGDWDGLQQIRSPEPAWPQSVFSNVPPTGAALTYESTVAVPPETTFPILLPIP
PGQTVTSVTATTPTADSGIDSNVVGSEAVVLRDAGGNTHTSILGTSGSIPENGTRTDTAM
VIPSNSRSKEQGTLTESDGVKPYDVDKYDDEWQSDSAPSTEMKVAQAGEPSKPPVQQERQ
TGHNASARISATHSASRRSSASTTSDAGTSIDGRSTQSAGESSNQLPIQTLGANASPTLQ
QTTVADKVLDAAPGNRGRSKSAVLSQPQVAKRVRSSSEDRLRPGGLDAAGLEHGIWQSGP
APSKEMKVTQVSEAPASQVSEASAQREWATGYDASATISVEHPASRRGSASTASDAGTSI
DGRSTQSAGESSNQLLAQTLEANASPTLQQTTVADKVLDAAPGNRGRSKSAMLLQPQVAK
RVRSSSEDRLRSGGLDAAGLEHGIWQSGPAPSKEMKVAQVSEAPASQVSETSAQQEWATG
YDASATISVEHPASRRGSASTASDAGTSIDGRSTQSAGESSNQLPPQTLEASPTLQQTTV
ADKVLDAAPGNRGRSKSAVLSQPQVAKRVRSSSEDRLGLGGLDAAGLEHGIWQSGPAPSK
EMKVAQVNEAPALQVSEASVQQEWATGYNASATMSAAHSASRRGSASTTSTINSMMADER
ERTLPLPPTESAGANRSLNSDLPSAVEQKPSGMKSAVMTLTTAILDGDGRPRPTEQTSPA
RAALTNPEKSDGTNALAAYADQRNADNLEGNAGVDPLSVGQADLMSKTGKEKPAQAGENI
PEPVASSSSNVPSRGQTDQEQNSEPTEMTSLTRPGPSMAAATPRDAAPEQDMRHGWLRKA
IAAELPSVMNEQLGISVDEAHISVGTPGHERKITHVARGTAPTDAVNKAQLDEAVARVDR
DASAGIAAAMAVAGLPQPTLPGKSLATFAGATYRGQYGAALGISHITPNNRWVFKLAANA
NGRGYFGAAVSGGFQW
NT seq
5631 nt
NT seq
+upstream
nt +downstream
nt
atgcggatttctgatgcaacgccagtaatagtttatggcgctccgttcgctcatcgctcc
aattacctcaggttcgctttatcaaggacgttgtgtgcgctcggagttgttaccgcattg
ctgatttccgacgtcgcgaggtcagccacagtcgagtccggtacgcaagatacgctgatg
ggcgaagtcgcctcgcacaatgaaggttcgagccagcccaaagggcggaaaacgcgttgg
gatgtgaagccgcccggtatgcaagatgatatgtcggtagacgaaggcgcgccgcatgat
aaggggtcgagcgagcctaaggcgcggagagcctcgcgttgggatgtgaagccgcccggt
atgcaagatgatatgtcggtagacgaaggcgcgccgcatgataaggggtcgagcgagcct
aaggcgcggagagcctcgcgctgggatgtgaagccgcccgatatgcaagatgatatgtcg
gtagacgaaggcgcgccgcatggtaaggggtcgagcgagcctaaggcgcggagagcctcg
cgctgggatgtgaagccgcccggtatgcaagatgatatgtcggtagacgaaggcgcgccg
catggtaaggggtcgagcgagcctaaggcgcggagagcctcgcgttgggatgtgaagccg
cccggtatgcaagatgatatgtcggtagacgaaggcgcgccgcatgataaggggtcgagc
gagcctaaggcgcggagagcctcgcgctgggatgtaaagccgcccgatatgcaagatgat
atgtcggtagacgaaggcgcgccgcatggtaaggggtcgagcgagcttaaggcgcggaga
gcctcgcgctgggatgtaaagccgcccggtatgcaagatgatatgtcggtaggcgaaagc
atgccgcatggtaagggggcgatcccgtctaaggtgcgggaaacatcgcgttgggatgtg
aagccgtccgataagcaagataagcggatagacaaagtcgcgccgcatgataaggggccg
agccagcccaaggggcgaaaaacgcgctgggatgtgaagccgcccggtatgcaagatgat
atgtcggtagacgaaggcgcgccgcatggtaaggggtcgagcgagcctaaggcacggaga
gcctcgcgttgggatgtgaagccgcccggtatgcaagatgatatgtcggtagacgaaggc
gcgccgcatgataaggggtcgagcgagcctaaggcgcggagagcctcgcgctgggatgtg
aagccgcccgatatgcaagatgatatgtcggtagacgaaggcgcgccgcatggtaagggg
acgatcccgtctaaggtgcgggaaacatcgcgttgggatgtgaagccgtccgataagcaa
gatacgcggatagacaaagtcgcgccgcatgataaggggtcgagcgagcttaaggcgcgg
agagcctcgcgctgggatgtaaagccgcccggtatgcaagatgatatgtcggtagatgaa
ggcgcgccgcatggtaagggggcgatcccgtctaaggtgcgggaaacatcgcgttgggat
gtgaaaccgtccgatatgcaagataagctggctccgaagcggaaacagcgtccggacgtg
acggatggaaaaccaacggaggttggcgtacgaagagaaaaacggatgcgcgagcggtcc
cattcggtcccaatatttttgccaagtgagtcttcaccaagcgaggtagaccgtttttcg
aaaagaatccgacaggccgatgaatcactatttgtcatagctccccaaaaagacaggggg
gagtccggcgactcgcagaaggacacggctaatcaaatcgacacggggagattgcaccca
ccggttacgggaaaaggctataccgacggcagtattgcgtcgttacctagcgtgcaagga
gctaaccggatacgccagagatctcggtcgctatcagcattatcgccagagcaggaacaa
cgccgtttgcaagttgatacgccgctgttcattctttcgccctcgcccgatggcggtgac
ggggattggaatagcttgcaacagattaggttgcacgagccggcctgggctcagtctgcg
gtttctggtgtgccgccgaccaatacgcacgatatgctgatagacgaaaccgcatcacac
gatcagggttcgaggcagcccaaggtgcgggaatcgcgattagatgtgaagccgtccacg
cccgtgtccgatacggaaaatacgctggtttcaaaagggaagtggaaacagcaactggac
gtgacgcctgaaacaccaatggaggttggtgtacaaagaaaaaaacggatgcgcgagcgg
tcccattcggtcccaatatttttgccaagtgagtcttcgccaagcgaggcagaccgtttt
tcgaaaagaatccgacaggccgatgaatcactatttgtcatagctccccaaaaaggcagt
gggaagtccggcgattcgcagaagggcaccgctgatcaaattgacacggggagattgcgc
ccatcgcttaaacaaccacagttcggtgacattacgggaaaggctactaccgacagcggc
attgcgctggtacctggcaagggagctaaccggacgcgccagaggtctcagtcgctacca
gtattatcgccagggctggaacaacgccgtttgcaagttgatacgccgctgttcgttctt
tcgccctcgcccgatggcggtgacggggattgggatggcttacaacagattaggtcgccc
gaaccggcttggcctcagtctgtgttttccaatgtaccgccgaccggtgcggcattgaca
tacgaaagtactgtcgccgttcctcccgaaaccacatttcccatcttgctgcctatccca
ccaggacagaccgttacaagtgtgaccgctaccacgccgactgctgactctggcatagat
agcaacgtggtgggtagcgaggctgttgtattgcgtgacgcaggtggcaatacgcacacg
tcgatcctgggaaccagtgggtccatccccgagaatgggacaaggactgacacggctatg
gtcatcccgtcgaactcaagaagcaaagaacaggggacgttgactgaatctgatggtgtg
aaaccgtatgatgtggataagtacgacgacgaatggcaaagtgactcagccccgtcaacg
gagatgaaggttgcgcaggcgggtgagccgagtaaaccgccggtccaacaggagcggcaa
accggtcataatgcgagcgccagaatctcggcgacacactcggcatcgcgccgaagtagc
gcatcgactacgagcgatgccggcaccagtatcgacggtaggtcaacacagtctgctggc
gagagtagcaatcagctcccgatccagacactgggggccaacgcgtcccctactttgcag
cagacgacagtggctgacaaggtgctagacgctgcgccgggcaacaggggaagatccaaa
tcggcagtgttgtcgcagcctcaggtggctaagcgggtgcgatccagcagtgaagaccga
ctcagaccgggcggcttggatgcggcaggcttggagcatggtatctggcaaagcggcccg
gccccatctaaagagatgaaggtgacgcaagtgagcgaagcgccggcttcgcaggtgagt
gaagcgtcggctcaacgggaatgggccaccggctacgatgcaagcgccaccatatcggtg
gaacacccggcatcgcgccgaggtagcgcatcgactgcgagcgatgctggcaccagtatc
gacggtaggtcaacacagtctgctggcgagagcagcaatcagctcttggcccagacactg
gaggccaacgcgtcccctaccttgcagcagacgacagtggctgacaaagtgctagacgct
gcgccgggcaacaggggaagatccaaatcggcaatgttgttgcagcctcaggtggctaag
cgggtgcgatccagcagtgaagaccgactcagatcgggcggcttggatgcggcaggcttg
gagcatggtatctggcaaagcggcccagccccatctaaggagatgaaggttgcgcaggtg
agcgaagcgccggcttcgcaggtgagtgaaacgtcggctcaacaggaatgggccaccggc
tacgatgcaagcgccaccatatcggtggaacacccggcatcgcgccgaggtagcgcatcg
actgcgagcgatgctggcaccagtatcgacggtaggtcaacacagtccgctggcgagagc
agcaatcagctcccgccccagacactggaagcctcccctaccttgcagcagacgacagtg
gctgacaaggtgctagacgctgcgccgggcaacaggggaagatccaaatcggcagtgttg
tcgcagcctcaggtggctaagcgggtgcgatccagcagtgaagaccgactcggattgggc
ggcttggatgcggcaggcttggagcatggtatctggcaaagcggcccagccccgtctaag
gagatgaaggttgcgcaagtgaacgaagcgccggctttgcaggtgagtgaagcgtcggtt
caacaggaatgggccaccggctacaatgcgagcgctaccatgtcggcggcacactcggca
tcgcgccgaggtagcgcgtcaactacgagcactatcaatagcatgatggcagacgagcgc
gagcgcacactgccgttgccaccgaccgagagtgcaggcgcgaatcggtccctcaactct
gacctgccttctgccgtggagcaaaagccaagcggcatgaaatcggctgtgatgacacta
acaacggctatcctggacggcgatggacgcccgcgtccgactgaacaaacgtcgccggca
cgggccgcactcacgaatccggagaaatcggatggtacgaatgctttggctgcgtatgct
gaccaaaggaatgccgacaacttggaagggaatgccggtgtagatccgctttcggtcggt
caagccgatttaatgtcgaagacgggtaaggaaaagccggctcaagcaggtgagaacatc
cccgaaccggttgctagcagttcctcaaatgttccgagtagagggcaaaccgatcaagaa
caaaactctgagccgacagaaatgacgtccttgacacggcccggtccaagtatggcggcc
gctacgccacgtgacgccgctcccgagcaagacatgcgtcatgggtggctgcgcaaggcg
atcgcggcagagctgccgtcggtcatgaacgagcaacttggtattagcgtggacgaagcc
cacatatcggtcggcacgcctggccacgagcgcaagatcacgcatgtcgcacgcggcact
gcaccgaccgatgcagtcaacaaagctcagttggacgaagccgtcgcgcgtgtcgatcgc
gacgcgtcagcaggcattgcagcggcaatggcagtggcgggattgccacaaccgacgttg
cccggaaagagtctggcgacgtttgcgggtgcgacgtaccgcggccagtatggcgctgcg
cttggcatatcgcacatcacaccgaataatcgttgggttttcaagctggccgcaaacgcg
aacggtcgcggttattttggcgccgctgtatcgggaggctttcaatggtga
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integrated database retrieval system
