Mycetohabitans rhizoxinica: RBRH_03718
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Entry
RBRH_03718 CDS
T01355
Name
(GenBank) Transcription accessory protein (S1 RNA binding domain)
KO
K06959
protein Tex
Organism
brh
Mycetohabitans rhizoxinica
Brite
KEGG Orthology (KO) [BR:
brh00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
RBRH_03718
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
S1_RRP5
YqgF
HHH_7
HHH_6
PsbU
Spt6_S1
Motif
Other DBs
NCBI-ProteinID:
CBW74885
UniProt:
E5AQK3
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Position
complement(1245867..1248272)
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AA seq
801 aa
AA seq
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MCHARPASRLWQNARLEPAQASPMTDNVALKIVQRIATELTVQPRQVAATVQLLDEGSTV
PFIARYRKEVTGNLDDTQLRLLEERLLYLRELEDRRAAILQSIDEQGKLTDTLRTAILAA
DMKQALEDLYLPYKPKRRTRAQIAREAGLQPLADALLADPTRDPHAQAAHFVNADKGVAD
IKAALDGARDILSEQFGETAELLGRLRNYLWNQGVVISTVVEGKEKEEGEKFRDYYDYAE
TIKTVPSHRALALFRGRNAGVLFVKLGLGEELDAQVPHPGEAMIARHFGIANQGRPADKW
LGDVCRWCWRVKVQPHLENDLLTQLRERAEHEAINVFARNLKDLLLAAPAGPRAVIGLDP
GLRTGVKVAVVDRTGKLLATDTIYPHEPRRDWDGSLARLARLAQATQAELISIGNGTASR
ETDKLASELIARHPELKLQKIVVSEAGASVYSASELAAKEFPELDVSLRGAVSIARRLQD
PLAELVKIEPKAIGVGQYQHDVNQRELARTLDAVVEDCVNAVGVDANTASIALLARVSGL
NATLARNIVEYRDTHGPFPSREHLKKVPRLGDKTFEQAAGFLRINHGENPLDRSAVHPEA
YPVVERILAKINKSVSDVMGNRDVLAKLCAAEFVDERFGLPTVRDILGELEKPGRDPRPE
FKTATFREGVETLADLSPGMILEGVVTNVAAFGAFIDIGVHQDGLVHVSAMSTKFVKDPH
EVVKAGQVVTVKVLEVDLKRQRISLTMRLSDDAAAGGAGAGSTAARDRDAGGRGGQGRGE
RTRETEPQGAMAAALAKLKLR
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
ttgtgtcacgcccggcccgcatcgcgcttatggcaaaatgcccggctcgaacctgcacaa
gcctcacccatgacggacaacgtagccctaaagatcgtacagcgcatcgccaccgaattg
actgtccagccgcggcaggtcgccgctaccgtacaactgctcgacgaaggatcaaccgtc
ccgttcatcgcgcgctaccgcaaagaagtcaccggcaacttggacgacacgcaactgcgc
ttgctcgaggagcggctactgtacctgcgcgagctcgaggatcgtcgcgcggcgatcctg
caaagcattgacgagcagggcaagctgactgatacgttgcgcaccgcgatcctagccgcc
gacatgaaacaggcgctcgaagatctttacctgccgtacaaacccaagcgtcgcacacgt
gcgcaaatcgcgcgcgaggcggggctgcagcctctggcggatgcgttgctcgcggatccg
acgcgcgatccacacgcgcaggccgcccatttcgtcaatgccgacaaaggcgttgccgac
atcaaggcggcgctggacggcgcgcgcgacatcctgtccgagcagttcggcgagacagcc
gagttactgggccgactgcgcaactacctgtggaatcagggcgtagtgatctccactgtc
gtcgagggcaaggaaaaagaggaaggcgagaaattccgcgattactacgattacgcggag
acgatcaagacggtgccatcgcaccgcgcgctcgcgctgttccggggccgcaatgccggc
gtgctgttcgttaagctcggcttgggcgaggagcttgatgcacaagtgccgcatcctggc
gaagcgatgattgcgcgccacttcggcattgccaatcaagggcggccggccgacaagtgg
ctcggcgacgtgtgtcgctggtgctggcgcgtgaaagtgcaaccgcatttggaaaacgac
ctgctgacccagttgcgcgagcgcgccgagcacgaagcgatcaatgtgttcgcacggaac
ttaaaagacttattgctggccgcgccggctggccccagggcggtgatcggattggacccg
ggactgcgcaccggcgtcaaggtggcggtagtcgatcgcactggcaagctgctggccacc
gatacgatttatccgcatgaaccgcgccgcgattgggacgggtcgctggcccggctcgcg
cggctcgcccaagcgacgcaggccgagctgatcagcatcggcaacggtaccgcatcgcgt
gaaaccgacaagctggccagcgagctcatcgcccgacatcccgaactgaagctgcaaaag
atcgtcgtctccgaggcgggcgcgtcggtgtactcggcgtcggagctggcggcgaaggaa
tttcccgaattggacgtatcgttgcgcggcgcggtttcgatcgcgcgccgcctgcaggat
ccgctcgccgagctggtgaagatcgagccaaaggcgatcggtgtgggccagtaccaacat
gacgtcaaccagcgggaactggcacgcacgctggatgcggtcgtcgaggattgcgtcaac
gcagtgggtgttgacgcgaacaccgcatcgattgcgctgcttgcccgggtatctggcctg
aacgcgacactcgcacgcaacatcgtcgagtatcgcgacacccatgggccatttccgtcc
cgagagcacttgaaaaaggtgccgcgcctgggcgacaagaccttcgagcaggcggccggc
ttcctgcgcatcaaccatggtgagaatccattggaccgctcggcagtgcaccccgaggcc
tatccggtggtcgagcgcatcctcgcgaagatcaacaagtcggtgtctgatgtgatgggc
aaccgtgacgtgctggcgaagctgtgcgcagccgagttcgtcgatgaacgctttggcctg
cctaccgtgcgtgacatcctgggcgagcttgaaaagccggggcgcgatccacggcccgag
ttcaagactgcgacgttccgcgaaggcgtcgagacgctcgccgacctgtcgcccgggatg
attctcgaaggggtcgtgaccaacgtcgcggcattcggcgcgttcatcgatatcggcgta
caccaggacgggctcgtgcacgtgtccgcgatgtcgacgaagttcgtgaaggacccgcac
gaggtcgtcaaggcaggccaggtcgtcaccgtcaaggtgctcgaggtagacctaaagcgg
cagcgcatctcgctgacaatgcgcctgtcagacgacgccgcggcaggcggagccggggcg
ggcagcacggcagcgcgtgaccgggatgccggtgggcgcggcggtcagggccgcggcgaa
cggacccgggagacagaaccgcaaggcgcgatggcagccgcgctcgccaagctcaagctg
cgctaa
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