Brachybacterium sp. NBEC-018: NLU66_03015
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Entry
NLU66_03015 CDS
T08499
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
brha
Brachybacterium sp. NBEC-018
Brite
KEGG Orthology (KO) [BR:
brha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
brha03032
]
NLU66_03015 (gyrB)
03400 DNA repair and recombination proteins [BR:
brha03400
]
NLU66_03015 (gyrB)
Enzymes [BR:
brha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
NLU66_03015 (gyrB)
DNA replication proteins [BR:
brha03032
]
Prokaryotic type
DNA Topoisomerases
NLU66_03015 (gyrB)
DNA repair and recombination proteins [BR:
brha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NLU66_03015 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
TOPRIM_C
PEPcase_2
Motif
Other DBs
NCBI-ProteinID:
UVY85682
LinkDB
All DBs
Position
complement(665327..667306)
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AA seq
659 aa
AA seq
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MTVLEGLEAVRKRPGMYIGSTGERGLHHMVQEIVDNSVDEAMAGHGDSIEVTLLEDGGVR
VVDHARGIPVAMHPTEGKPAVELVLTVLHAGGKFGGGGYAVSGGLHGVGSSVVNALSTRM
AVEIRRDGHVWRQSYARGVPEVPLDKGEETEETGTTITFWADGEIFDETVYDFETLRKRF
QQMAFLNKGLRISLTDERTPEAEEDPDLVDVEIDGPDATEAKDKGPRTVSYRYERGLQDY
VEFINSAKRAEVIHPDVVSFESEDTEAQISVEVAMQWTTAYSESVHTYANTINTHEGGTH
EEGFRSALTSIVNRYGKAQGILKEKDANLTGEDIREGLTAVISVKLGEPQFEGQTKTKLG
NTVARTFMVKVMTDQLQDWFESHPQEAKSIVLKGQAAAAAREAARKARDATRRKSPLETG
GMPGKLRDCSSRNPGECEIFIVEGDSAGGSAVSGRDPRTQAILPIRGKILNVEKARLDRA
LDNQEVRSLITAFGTGIGEDFDATKLRYHKIILMADADVDGQHICTLLLTLLFRYMRPLI
ELGHVFIAMPPLYRLKWSNAPHEYVFSDEERNANLEAGRAAGKRIPKDNGIQRYKGLGEM
DWKELQTTTMDRDSRTLKQVTVDEAADADTIFSVLMGDDVDARRRFIQENAKDVRFLDI
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atcaccgtcctcgagggcctcgaggcggtgcgcaagcgccccggcatgtacatcggctcc
accggtgagcgcggcctgcaccacatggtgcaggagatcgtcgacaactccgtggacgag
gcgatggccggccacggcgactcgatcgaggtcacgctgctcgaggacggcggcgtccgc
gtcgtcgaccacgcccgcggcatccccgtcgcgatgcaccccaccgagggcaagccggcc
gtcgagctcgtgctcaccgtcctccacgcgggcggcaagttcggcggcggcggctatgcc
gtctccggcggcctgcacggcgtgggctcctccgtcgtcaacgcgctctcgacccgcatg
gcggtggagatccgccgcgacggccacgtctggcgccagtcctacgcccgcggcgtgccc
gaggtcccgctcgacaagggcgaggagaccgaggagaccggcaccacgatcaccttctgg
gctgacggcgagatcttcgacgagaccgtctacgacttcgagacgctccgcaagcgcttc
cagcagatggcgttcctcaacaaggggctgcggatctcgctcaccgacgagcgcaccccc
gaggccgaggaggacccggacctcgtcgacgtcgagatcgacggccccgacgccaccgag
gcgaaggacaagggcccgcgcaccgtctcctaccgctacgagcgggggctgcaggactac
gtcgagttcatcaactccgccaagcgcgccgaggtcatccaccccgacgtcgtctccttc
gagtccgaggacaccgaggcgcagatcagcgtcgaggtcgccatgcagtggaccaccgcc
tactccgagtcggtccacacctacgccaacacgatcaacacccatgagggcggcacccac
gaggagggcttccgcagcgcgctgacctcgatcgtcaaccgctacggcaaggcgcagggc
atcctcaaggagaaggacgccaacctcacgggcgaggacatccgcgagggcctcaccgcc
gtgatctcggtgaagctcggcgagccgcagttcgagggccagaccaagaccaagctcggc
aacaccgtggcccgcaccttcatggtcaaggtcatgacggaccagctccaggactggttc
gagtcgcacccgcaggaggcgaagtcgatcgtcctcaagggccaggccgccgcggccgcc
cgcgaggcggcccgcaaggcgcgcgacgcgacccgtcggaagtccccgctcgagaccggc
ggcatgccgggcaagctgcgcgactgctcctcccgcaatcccggggagtgcgagatcttc
atcgtcgagggcgactcggcaggcggctccgccgtctccgggcgcgacccgcgcacccag
gcgatcctcccgatccgcggcaagatcctcaacgtcgagaaggcgcggctggaccgcgcc
ctggacaaccaggaggtccgctccctgatcacggccttcggcacggggatcggcgaggac
ttcgacgccaccaagctccgctaccacaagatcatcctcatggcggacgccgacgtcgac
ggccagcacatctgcaccctgctgctgaccctgctcttccgctacatgcgcccgctcatc
gagctcggccacgtgttcatcgcgatgccgccgctgtaccgcctgaagtggtccaacgcc
ccgcacgagtacgtgttcagcgacgaggagcgcaacgcgaacctcgaggcgggccgcgcg
gccggcaagcggatccccaaggacaacggcatccagcgctacaagggcctcggcgagatg
gactggaaggagctgcagaccacgacgatggaccgcgactcccgcaccctcaagcaggtc
accgtggacgaggcggccgacgccgacaccatcttctccgtgctcatgggcgacgacgtc
gacgcgcgtcgtcgcttcatccaggagaacgcgaaggacgtccgcttcctcgacatctga
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