Brachybacterium sp. NBEC-018: NLU66_11240
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Entry
NLU66_11240 CDS
T08499
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
brha
Brachybacterium sp. NBEC-018
Pathway
brha03030
DNA replication
brha03430
Mismatch repair
brha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
brha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NLU66_11240 (holA)
03430 Mismatch repair
NLU66_11240 (holA)
03440 Homologous recombination
NLU66_11240 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
brha03032
]
NLU66_11240 (holA)
03400 DNA repair and recombination proteins [BR:
brha03400
]
NLU66_11240 (holA)
Enzymes [BR:
brha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NLU66_11240 (holA)
DNA replication proteins [BR:
brha03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NLU66_11240 (holA)
DNA repair and recombination proteins [BR:
brha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NLU66_11240 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
UVY82804
LinkDB
All DBs
Position
2486993..2487979
Genome browser
AA seq
328 aa
AA seq
DB search
MSDVEWHSVTPAPIVLIQGTETLIADRAVQRLRGLAREQDPGVAVHDLSGEALTAGALTQ
VASPSLFGEPRFVVVPELQAAPEALILELLDYLPRPEEDVSLVLVHRGGNRGKKLLDALK
KAGVPRVDASPVKRPADKQAFVAAEFARADRRAQPEAITALVDAFGTDLAELAAISRQLI
EDTTPEPGEQPAPITAQDVHALTAGRVESTAFAVADAAIAGREQEALQLLAQAQLAGADP
VPIVAAVAMKMRQLAKITSPGASARTLGMPDWMIRNLSREARAWNDRSLARAIEAVARAD
HEVKGAGRDPRWSVQRMVMEICRARRSR
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacgtcgagtggcacagcgtcacgcccgccccgatcgtgctgatccagggcacc
gagacgctgatcgccgaccgcgccgtccagcggctgcggggcctcgcgcgcgagcaggac
ccgggcgtcgcggtccacgacctctcgggagaggcgctcaccgccggcgccctcacccag
gtcgcgagcccctcgctcttcggcgagccgcggttcgtcgtggtccccgagctgcaggcg
gcccccgaggccctgatcctcgagctcctcgactacctgccccgccccgaggaggacgtc
tccctcgtgctcgtccaccgcggcggcaaccgcgggaagaagctcctggacgcgctcaag
aaggccggcgtcccgcgggtggacgcgagccccgtcaagcgccccgcggacaagcaggcc
ttcgtcgccgcggagttcgcgcgcgccgaccgccgcgcccagcccgaggcgatcaccgcc
ctcgtcgacgccttcggcaccgacctcgccgagctcgccgcgatcagccgtcagctcatc
gaggacaccactcccgagccgggcgagcagcccgcaccgatcaccgcgcaggacgttcac
gcgctcacggcgggccgcgtcgagtccaccgccttcgccgtcgcggacgccgccatcgcc
ggccgtgagcaggaggccctccagctcctcgcccaggcgcagctcgcaggggcggacccg
gtgccgatcgtcgcggcggtcgcgatgaagatgcgccagctcgcgaagatcacctcgccc
ggggcgagtgcccggaccctcggcatgccggactggatgatccggaacctctcccgcgag
gcccgcgcctggaacgaccgctccctggcccgcgcgatcgaggctgtcgcgcgtgccgat
cacgaggtcaagggcgccggccgggatccccgctggtccgtccagcgcatggtgatggag
atctgccgagcccggcgctcccgctga
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