Brachybacterium sp. NBEC-018: NLU66_11815
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Entry
NLU66_11815 CDS
T08499
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
brha
Brachybacterium sp. NBEC-018
Brite
KEGG Orthology (KO) [BR:
brha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
brha03051
]
NLU66_11815 (pafA)
Enzymes [BR:
brha01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
NLU66_11815 (pafA)
Proteasome [BR:
brha03051
]
Prokaryotic proteasome
Bacterial regulatory particles
NLU66_11815 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
DUF6522
Motif
Other DBs
NCBI-ProteinID:
UVY82913
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Position
2604079..2605482
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AA seq
467 aa
AA seq
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MRRRVGGLETEFGLVCVRADATRALEPEAAARELFRPVVAQGRSSNVFLRNAARLYLDVG
SHPEYATAECDDWWDLVAQDAAGERILAELVGSANTRLAEDGQDARIHLLKNNVDSQGNA
FGSHENYLVDRRGEFTRLPRYLLPFLVTRQIVTGAGGVVVDRPLGEPTAPGTPRFVFSRR
SDHMWEAVSSATTRTRPIINTRDEPHGDPTRFRRLHVIVGDSTRSEVSTHLRFATTDLVL
RLIESGRTLPELALADDIAAIRVVARDLTGAEPLALAAGGTTTALEVQQRWLDLAATVAE
PAEQEVLETWQKALDAVRTGDRSWAAQHLDWAIKERLVSQVVERRGVALDDPVIERLDLG
YHDIDPSGSVFASLRRRGLAPAVLDEQRIAAAVRTAPASTRAHLRGQVVTAALEHGVDHV
VDWTTLRLTRSGSAPVQILDPFQTRSDEVDALLARIRGDGAPTPGAV
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgccgcgtgggagggctggagaccgagttcgggctcgtgtgcgtccgtgcggac
gccacgcgcgccctcgagccggaggccgccgcccgggagctgttccgaccggtcgtggcc
caggggcgctcctcgaacgtcttcctgcgcaacgccgcccggctgtacctcgacgtgggc
tcgcaccccgagtacgcgaccgccgagtgcgacgactggtgggacctcgtggcccaggac
gccgcgggggagcggatcctcgccgagctcgtcggctccgcgaacacgcgcctcgccgag
gacggccaggacgcccgcatccacctgctcaagaacaacgtggactcccagggcaacgcg
ttcggctcccacgagaactacctcgtggaccgccgcggggagttcacgcggctgccgcgc
tacctgctgcccttcctcgtgacccgccagatcgtcaccggcgcgggcggcgtcgtcgtc
gaccggccgctcggggagcccaccgcccccggcaccccgcgcttcgtcttctcacgccgc
agcgaccacatgtgggaggcggtctcctccgcgaccacgcgcacccgcccgatcatcaac
acccgcgacgagccgcacggcgaccccacacggttccggcgcctccacgtgatcgtcggc
gactccacgcgcagcgaggtctccacccacctgcgcttcgcgaccacggacctcgtgctg
cggctcatcgagtccgggcgcacgctccccgagctcgcgctcgcggacgacatcgccgcg
atccgggtcgtcgcccgcgacctcacgggcgcggagccgctcgcgctcgccgccgggggc
accacgaccgcgctcgaggtgcagcagcgctggctcgacctcgcggcgaccgtcgccgag
cccgccgagcaggaggtcctcgagacctggcagaaggcgctcgacgcggtgcgcacgggg
gaccgctcctgggccgctcagcacctcgactgggccatcaaggagcgtctggtctcccag
gtcgtcgagaggcgcggcgtcgcgctcgacgacccggtgatcgagcgcctcgacctcggc
taccacgacatcgacccgagcggctcggtcttcgcctcgctgcgccggcgcgggctcgcc
ccggcggtgctcgacgagcagcggatcgccgcggcggtcaggacggcgcccgcgagcacc
cgcgcccacctgcgcggacaggtcgtgacggccgcgctcgagcacggggtggaccatgtc
gtggactggaccacgctgcggctgacccgctcgggctccgcgccggtgcagatcctggac
ccgttccagacccgcagcgacgaggtggatgcgctcctggcgcggatccgcggcgacggc
gccccgacccccggcgccgtctga
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