Brachybacterium sp. NBEC-018: NLU66_14590
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Entry
NLU66_14590 CDS
T08499
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
brha
Brachybacterium sp. NBEC-018
Pathway
brha03030
DNA replication
brha03430
Mismatch repair
brha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
brha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NLU66_14590 (dnaE)
03430 Mismatch repair
NLU66_14590 (dnaE)
03440 Homologous recombination
NLU66_14590 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
brha03032
]
NLU66_14590 (dnaE)
03400 DNA repair and recombination proteins [BR:
brha03400
]
NLU66_14590 (dnaE)
Enzymes [BR:
brha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NLU66_14590 (dnaE)
DNA replication proteins [BR:
brha03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NLU66_14590 (dnaE)
DNA repair and recombination proteins [BR:
brha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NLU66_14590 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
DUF655
MCM10_OB
Motif
Other DBs
NCBI-ProteinID:
UVY83429
LinkDB
All DBs
Position
complement(3215907..3219476)
Genome browser
AA seq
1189 aa
AA seq
DB search
MASAGNDDFVHLHVHTDYSLLDGAAKIDKLVAEAAHQGQSAVAITDHGYLFGAYEFYRAA
TNAGVKPIIGVEAYVTPGTSRHDRTRVQWGTKEQQLAGDDVSARGAYTHMTLLSKSTEGM
HNLFRLGSAASLDGQMGKWPRMDREILAKYAPGLIATSGCPSGEVQTRLRLGQVDEAIKA
AGEFQDMFGKENYFIELMDHGLDIERRVTKGLLEVSKAVGAPLVATNDLHYVTEQDATIQ
DVLLCINSGSKLTDPDRFKFDGSGYFLKSAQQMRELFREFPEACDNTLRIAEMCDVAFTT
TAEGANYMPHFPTPGGEDEDSWFVKQVQDGLEYRYPAGIPDNVQQRADYEVGIILQMGFP
GYFLVVSDYIKWAKEQGIRVGPGRGSGAGSMVAYAMRITDLDPIEHGLLFERFLNPDRVS
MPDFDVDFDDRRRGEVIDYVEQKYGDDKVAQVVTYGVMKTKNSLKDAARVLDYPFAVGDR
ITKALPPAVMGKDIPIKGIFDPEHKRYAEATEFRRLHDEDPDVQKVVGIAKGVEGLTRGW
GVHACAVIMSSHTLTDIIPMMRRPSDGQIITQFEYPTCETLGLLKMDFLGLRNLTVLSDA
VQNIERNGKEPVDLEQLPFDDPATYELLQRGDTLGVFQLDGSGMRTLLRQMKPDKFGDIT
AVSALYRPGPMGMGSHTNYALRKNGLQPITPIHPELEEPLAEILGETYGVLVYQEQVMQT
AQKVAGYSLGEADILRRAMGKKKKAELDKQYVSFEAGMKEHGYSDAAVAALWETLLPFAD
YAFNKSHSAAYGVVSYWTGYLKANYPTEYMAALLTSTQENRDRLGLYLGDCRHRGITVLP
PDVNESDLYFSAVGDDIRFGLSAIRNVGANVVEEIIKAREEKGAFTSFTDFLDKVPLSVC
NKRTIESLIKGGAFDSLGHNRRSLVLIHEDAVDSVVDVKRKEAQGQYDLFADMLGGGGAD
DGMATGSAATLTIPELPEWDRKEKLAFERNMLGLYVSDHPLYGLEHVIAQNSSIAISALA
DDGAVEDGTMVTIAGLITTLQRKTTKKGDMWAIATVEDLEGAIDCLMFPSTYMTVASELA
EDLVVSMKGRVDTSKGMPELRVMEMTIPEVGSGPDGPVTLVLPAMRATSKVAEGIRGVLE
DNPGSSEVHLRLQEPGRTTLMQLDKRLSVTPSPALYASLKALLGPGCLM
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgcgggtaacgacgacttcgtccatctccacgtccacaccgactactccctc
ctggacggggcggcgaagatcgacaagctcgtcgccgaggccgcccaccaggggcagagc
gcggtcgcgatcaccgatcacgggtacctcttcggcgcctacgagttctaccgcgcggcg
acgaacgccggggtgaagccgatcatcggcgtcgaggcgtacgtgaccccggggaccagc
cggcacgaccgcacgcgcgtgcagtgggggaccaaggagcagcagctcgccggcgacgac
gtctccgcgcgcggcgcctacacgcacatgaccctgctgtcgaagtcgaccgagggcatg
cacaacctcttccgcctgggctccgccgcctccctcgacggccagatgggcaagtggccg
cgcatggaccgcgagatcctcgcgaagtacgcgccgggcctcatcgcgacctccggctgc
ccctccggcgaggtgcagacccggctccgcctgggacaggtcgacgaggccatcaaggcc
gccggcgagttccaggacatgttcggcaaggagaactacttcatcgagctcatggaccac
gggctcgacatcgagcggcgggtcacgaagggcctgctcgaggtgtcgaaggccgtgggt
gccccgctcgtcgcgaccaacgacctccactacgtcaccgagcaggacgcgaccatccag
gacgtgctgctgtgcatcaactccgggtccaagctcaccgacccggaccgcttcaagttc
gacggctccggctacttcctgaagtccgcccagcagatgcgcgagctgttccgcgagttc
cccgaggcgtgcgacaacacgctgcggatcgccgagatgtgcgacgtcgccttcacgacg
accgccgagggcgcgaactacatgccgcacttcccgacccccggcggcgaggacgaggac
tcctggttcgtcaagcaggtccaggacggcctcgagtaccgctaccccgccggcatcccc
gacaacgtccagcagcgcgcggactacgaggtcgggatcatcctccagatgggcttcccg
ggctacttcctcgtcgtctccgactacatcaagtgggccaaggagcaggggatccgcgtg
ggaccgggccgaggctcgggcgccggctcgatggtcgcctacgccatgcgcatcaccgac
ctcgacccgatcgagcacggcctgctcttcgagcggttcctcaaccccgaccgcgtctcc
atgcccgacttcgacgtcgacttcgatgatcgccgccgcggcgaggtcatcgactacgtc
gagcagaagtacggcgacgacaaggtcgcccaggtcgtcacctacggcgtcatgaagacg
aagaactccctcaaggacgccgcccgcgtcctggactaccccttcgccgtcggcgaccgg
atcacgaaggcgctgccgccggccgtgatgggcaaggacatcccgatcaaggggatcttc
gaccccgagcacaagcgctatgcggaggcgaccgagttccgccgtctccacgacgaggac
ccggacgtccagaaggtcgtcgggatcgcgaagggcgtcgagggcctgacccgcggctgg
ggcgtccacgcctgcgcggtcatcatgtccagccacaccctcaccgacatcatcccgatg
atgcgccgcccctccgacggccagatcatcactcagttcgagtacccgacctgcgagacg
ctcggcctgctgaagatggacttcctggggctgcgcaacctcacggtgctctccgacgcg
gtgcagaacatcgagcgcaacggcaaggagcccgtcgacctcgagcagctgcccttcgac
gaccccgccacctacgagctgctccagcgcggcgacacgctcggcgtgttccagctggac
ggcagcggcatgcgcaccctgctgcggcagatgaagcccgacaagttcggcgacatcacc
gccgtctcggcgctctaccgcccgggcccgatgggcatgggctcgcacacgaactacgcg
ctgcgcaagaacggcctgcagccgatcacgccgatccacccggagctcgaggagccgctc
gcggagatcctcggcgagacctacggcgtgctcgtctaccaggagcaggtcatgcagacc
gcgcagaaggtcgcgggctacagcctcggcgaggcggacatcctccgccgcgccatgggc
aagaagaagaaggcggagctggacaagcagtacgtctccttcgaggccggcatgaaggag
cacggctactccgacgccgccgtcgccgcgctctgggagaccctgctgcccttcgcggac
tacgcgttcaacaagtcacactccgccgcctacggcgtggtctcctactggaccggctac
ctcaaggcgaactacccgaccgagtacatggccgcgctgctcacctccacgcaggagaac
cgcgaccggctcggcctgtacctgggcgactgccgccaccgcgggatcacggtgctgccg
cccgacgtcaacgagtcggacctgtacttctccgccgtcggcgacgacatccgcttcggc
ctctccgcgatccgcaacgtgggcgcgaacgtcgtcgaggagatcatcaaggcgcgcgag
gagaagggcgccttcacctccttcacggacttcctcgacaaggtgccgctcagcgtgtgc
aacaagcgcacgatcgagtcgctcatcaagggcggggccttcgactcgctgggccacaac
cgccgctccctcgtgctcatccacgaggacgccgtggactccgtggtcgacgtcaagcgc
aaggaggcccagggccagtacgacctcttcgcggacatgctcggcgggggcggggccgac
gacggcatggccaccggctccgccgcgaccctcacgatccccgagctgcccgagtgggac
cgcaaggagaagctcgccttcgagcggaacatgctgggcctgtacgtctccgaccacccg
ctgtacggcctcgagcacgtgatcgcgcagaactcctcgatcgcgatcagcgccctcgcg
gacgacggcgcggtcgaggacggcacgatggtcacgatcgcggggctcatcacgaccctg
cagcgcaagaccaccaagaagggcgacatgtgggcgatcgccaccgtcgaggacctcgag
ggcgcgatcgactgcctcatgttcccctcgacatacatgaccgtcgcctccgagctcgcc
gaggacctcgtcgtctcgatgaagggacgtgtggacacctccaagggcatgcccgagctg
cgcgtcatggagatgacgatccccgaggtgggctccggcccggacggccccgtcacgctc
gtcctcccggcgatgcgcgcgacctcgaaggtcgccgagggcatccgcggggtgctcgag
gacaacccgggctcgagcgaggtgcacctgcggctccaggagccgggccgcacgacgctc
atgcagctggacaagcggctctcggtgacgccctcgcctgcgctctacgcctcgctgaag
gcgctgctgggtcccggctgcctgatgtga
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