KEGG   Brachybacterium sp. NBEC-018: NLU66_17000
Entry
NLU66_17000       CDS       T08499                                 
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
brha  Brachybacterium sp. NBEC-018
Pathway
brha03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:brha00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    NLU66_17000
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:brha03400]
    NLU66_17000
DNA repair and recombination proteins [BR:brha03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     NLU66_17000
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      NLU66_17000
SSDB
Motif
Pfam: ABC_tran UvrA_DNA-bind AAA_21 SMC_N Anti-TRAP DnaJ_CXXCXGXG nSTAND1 AAA_29 AAA_25 DUF4350 AAA_16 ATPase AAA_23 BCA_ABC_TP_C AAA_22 HVO_2753_ZBP RNase_E_G_Thio RecA
Other DBs
NCBI-ProteinID: UVY83885
LinkDB
Position
3710018..3712534
AA seq 838 aa
MTDRRSTPPPIPTSITVRGARVHNLRGIDVDIPLQSLVGIAGVSGSGKSSLAMGVLYAEG
SRRYIEALSTYTRRRLSQAPRADVDEVAHVPAALALRQRPSVPGVRSTFGTSTELLNVLR
LIFSRLAAHLCPNGHRVPPTLDVAAEVPFSCPECGEQVIAPGAEELAFNAEGACPRCDGV
GTIRSVDDASLVPDPTRTLEDGAVVPWQMFGFNVQPAIAREFGVRIDVPWQDLEEWERQI
VLDGPEEKKHITVTSKKGLHELDFTFRNARLTVTEELRRADTEKRLARVDRFLTESVCPD
CEGTRLSPRARGPRIGDLGLAGATALTLDALLAWAPTIIDPLPESMHPMARVLVEQLVSM
AGRLTELGLGYLALDRAGSSLSTGELQRVQLARAVRNRTTGVLYVLDEPSIGLHPSNIEG
LLGLVEDLLADGNSVVLVDHDVQVLRAVDHLVEIGPGSGAEGGTVIAQGTVEQIAAAPAS
RLGGFLDGREEVIVRERAAGDGESLRLVTDAIHTVHPLEVELPRGRLTAVTGVSGSGKTT
LVLDSLVPAVQALIDDRPLPGHVRSLEAPGIRRVHRIDASPIGVNVRSTVATYSGVMDEL
RRAFARTEDARERGLTLSDFSYNTGSLRCPRCEGTGQVSLDVQFLPDVDIDCPECGGHRY
GPQADAVLRPRADGPGGISLPHLLSLSVREAIGLVDDLPSVRRRLQALIDLGLGYLTLGE
DTPALSGGEAQRLKLAGQIDRRQDDALFVFDEPSVGLHPEDVRTLLAVLDRLVERGASVV
VIEHDLDMIANADHVLDMGPGGGEAGGRVVALGTPEEVAADPASATGRHLRAHLAGEG
NT seq 2517 nt   +upstreamnt  +downstreamnt
gtgaccgatcgccgcagcactcccccgccgatccccacgtcgatcaccgtgcgcggcgca
cgcgtgcacaacctgcgcgggatcgacgtggacatcccgctgcagtccctcgtcggcatc
gccggcgtctccggctccggcaagtcctccctcgccatgggcgtgctctacgcggagggc
tcccggcgctacatcgaggcgctgtccacctacacccgccgccggctctcgcaggcgccg
cgggcggacgtcgacgaggtcgcccacgtccccgccgcgctcgccctgcgccagcggccc
tccgtgcccggcgtgcgctccaccttcggcacctccaccgagctgctgaacgtgctgcgc
ctgatcttctcccgcctcgccgcgcacctgtgcccgaacggccaccgggtcccgcccacc
ctcgacgtcgccgccgaggtccccttctcctgccccgagtgcggggagcaggtgatcgcc
ccgggcgccgaggagctcgccttcaacgccgagggtgcctgcccgcgctgcgacggggtc
ggcacgatccgctccgtcgacgacgcgtccctcgtccccgaccccacgcggaccctcgag
gacggcgccgtcgtcccctggcagatgttcggcttcaacgtgcagcccgcgatcgcccgc
gagttcggcgtgcgcatcgacgtgccctggcaggacctcgaggagtgggagcggcagatc
gtcctcgacggccccgaggagaagaagcacatcaccgtcacctcgaagaaggggctgcac
gagctcgacttcaccttccgcaacgcgcgcctcaccgtcaccgaggagctgcgccgcgcg
gacaccgagaagcggctcgcccgcgtggaccgcttcctcaccgagagcgtctgcccggac
tgcgagggcacccggctgtccccgcgcgcccgcggaccgcggatcggcgacctgggcctc
gccggcgccaccgccctcaccctcgacgcgctcctggcctgggcgcccacgatcatcgac
cccctgccggagagcatgcaccccatggcgcgggtgctcgtcgagcagctcgtctcgatg
gcggggcggctcaccgagctgggcctcggctacctcgccctggaccgggccggctcgagc
ctgtccaccggcgagctgcagcgcgtgcagctcgcccgcgccgtccgcaaccgcaccacc
ggggtgctctacgtgctcgacgagccgagcatcggcctgcacccctcgaacatcgagggc
ctgctggggctcgtcgaggacctcctcgccgacggcaactccgtggtcctcgtcgaccac
gacgtgcaggtgctgcgcgccgtggaccacctcgtcgagatcggacccggctccggcgcg
gagggcggcaccgtcatcgcccagggcaccgtcgagcagatcgccgcggcgcccgcctcc
cgcctcggcggcttcctcgacggtcgcgaggaggtgatcgtgcgggagcgcgccgcgggc
gacggggagtcgctgcgcctggtcaccgacgcgatccacaccgtccacccgctcgaggtc
gagctgccccgcggccgcctcaccgccgtcaccggggtctccggctccgggaagacgacg
ctcgtgctcgactccctcgtccccgcggtgcaggccctcatcgacgaccgccccctaccc
ggccacgtgcgctccctcgaggcgcccggtatccggcgcgtgcaccggatcgacgcgagc
ccgatcggcgtgaacgtccgctccaccgtcgcgacctactccggcgtcatggacgagctg
cgccgcgccttcgcccgcaccgaggacgcccgcgagcgcgggctcaccctcagcgacttc
tcctacaacaccggctccctgcgctgcccgcgctgcgagggcaccgggcaggtctccctc
gacgtgcagttcctcccggacgtcgacatcgactgccccgagtgcggcggccaccgctac
gggccgcaggccgacgcggtcctccgcccgcgggccgacggccccggcgggatctccctc
ccccacctgctgtccctctccgtgcgggaggcgatcgggctcgtcgacgacctcccctcc
gtgcgccgccggctccaggccctcatcgacctgggcctgggctacctgaccctcggggag
gacaccccggcgctctccggcggggaggcgcagcggctcaagctcgccgggcagatcgac
cgccgccaggacgacgccctcttcgtcttcgacgagccgagcgtgggcctgcaccccgag
gacgtccgcaccctgctcgccgtgctcgaccggctcgtggagcgcggggcgagcgtggtc
gtcatcgagcacgacctcgacatgatcgccaacgcggaccacgtcctcgacatgggcccg
ggcggcggcgaggccggcggccgcgtggtcgccctcggcacccccgaggaggtcgccgcg
gatccggcgagcgcgaccggccgccacctgagggcgcacctcgccggggagggctga

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