Buceros rhinoceros silvestris (rhinoceros hornbill): 104488918
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Entry
104488918 CDS
T08612
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA 3'-end-processing factor FIP1-like
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
brhi
Buceros rhinoceros silvestris (rhinoceros hornbill)
Pathway
brhi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
brhi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104488918
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brhi03019
]
104488918
Messenger RNA biogenesis [BR:
brhi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
104488918
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
TSX
Motif
Other DBs
NCBI-GeneID:
104488918
NCBI-ProteinID:
XP_010129316
LinkDB
All DBs
Position
Unknown
AA seq
530 aa
AA seq
DB search
DTTGKQEDGPISGHTESSHPLQDAPQENRPVSNEDREMSQHALPSGEDDEDDSDSDSDDD
DVKVTIGNIKTGAPSYMGTPMNLNLKTGRGYGASASAKLQPKGIDLDAAGNINGLPVIEV
DLDSFEDKPWRKPGADLSDYFNYGFNEETWKAYCEKQRRLQLGLDPAPPINTENKITVQQ
GRTGNTEKEVENNIIKTEFKTDFLALVGGRMKAGPPPNRKLGGTIDVIGGQAGTIRRVEG
RRRDKHASEENPIQVLGDHGSKPQPPQQPQQPXQPKQPPQQQPFAPPAGPPPPPLAGPPP
PHFLHPPPPVTSVPPPLHPPGLPPPGPIPGLFPPPLAPPPALLLPTLDGQPASYNNRQPP
PFGYNSADSGFISYPPISTSHTPWVTTVDKGTSSSSSSHWEYSGSRRERERERERERERE
RDRDRTPTTSEYNNDDERYRYYSRERSYDFERDYRRSRDRSREREDRHRERRHRDKEESS
KHKSSRRKQHESEEGESHRRHKHKKNKRSKEEKEASEDGAQEGEEQDAKE
NT seq
1595 nt
NT seq
+upstream
nt +downstream
nt
atgacaccactggtaagcaagaagatggaccaatttctggacacacagaatcttctcatc
ctttgcaagatgctcctcaggagaaccgacctgtcagcaatgaagaccgagagatgtcac
aacatgcccttccaagtggtgaagatgatgaagatgacagcgatagtgacagtgatgatg
atgacgtgaaagttactattggcaacattaaaacaggagctccatcgtacatgggaactc
cgatgaatctcaacttaaaaacgggtagaggctacggagcatccgcttcagccaagttgc
agcccaaaggtattgacttagatgccgcagggaatataaatggattgcctgtcatcgaag
tggatttagactcctttgaagacaagccgtggaggaaaccaggtgctgatctttccgatt
actttaattacggattcaatgaagaaacgtggaaagcttattgtgaaaaacagcgacggc
ttcagctgggactggatcctgctcctcccatcaacactgaaaataaaatcacggttcagc
aaggaagaacaggaaacactgaaaaagaagtggaaaacaacatcatcaaaacagaattca
aaacagacttcttggcgctggtgggaggacgcatgaaggctgggcctcctccgaacagga
agctgggtgggacgattgatgtgatcggcggccaggcaggcacaattaggagagtagaag
gaagacgccgtgataagcatgcctctgaggaaaacccaattcaggtccttggagaccacg
gaagtaagcctcagccaccccagcagccacagcagccataacagcccaagcagccacctc
agcaacagccgtttgcaccaccagcaggcccaccgcctcccccactcgctgggccgcctc
cgccacattttctccatcctcctcctccagtcacttctgttccaccgcccctgcaccctc
caggtctgccgccgcccggccctattccagggctgttcccgcctccgctggcaccgccac
cagctctcctcctcccaaccttggatggccagccagccagctacaacaacaggcagcctc
cgccctttggctacaactctgcagattcaggtttcatcagctacccacccatctccacgt
cccacacgccctgggtgacgacggtggacaaaggcacaagcagctccagcagcagccact
gggagtactcgggctcgaggcgtgagagggagcgggagcgcgagcgggagcgggaaaggg
agagagacagggaccgcactcccaccactagcgagtacaacaatgatgatgaacgttacc
gctactacagccgagagcgcagctacgacttcgagcgcgactaccgccggagccgagatc
gcagcagggagcgtgaggatcggcaccgcgagcgcaggcaccgcgacaaggaggagagca
gcaagcataagtcttcgagacgcaaacaacatgagagcgaggagggggagagtcaccggc
gccacaagcacaaaaagaacaagcgcagcaaagaggagaaggaggccagcgaagatggtg
cgcaggagggagaggagcaggatgccaaggagtaa
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