KEGG   Buceros rhinoceros silvestris (rhinoceros hornbill): 104489176
Entry
104489176         CDS       T08612                                 
Name
(RefSeq) collagen alpha-2(IV) chain-like
  KO
K06237  collagen type IV alpha
Organism
brhi  Buceros rhinoceros silvestris (rhinoceros hornbill)
Pathway
brhi04382  Cornified envelope formation
brhi04510  Focal adhesion
brhi04512  ECM-receptor interaction
brhi04518  Integrin signaling
brhi04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:brhi00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    104489176
   04518 Integrin signaling
    104489176
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    104489176
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    104489176
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    104489176
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:brhi04147]
    104489176
   00536 Glycosaminoglycan binding proteins [BR:brhi00536]
    104489176
Exosome [BR:brhi04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   104489176
Glycosaminoglycan binding proteins [BR:brhi00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   104489176
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 104489176
NCBI-ProteinID: XP_010129606
LinkDB
Position
Unknown
AA seq 1222 aa
GGKTYTGPCGGRDCSGGCQCFPEKGSRGQPGLLGSQGFTGPPGLMGIPGVQGPKGHKGER
GYPGITGPKGEVGQRGVTGFPGADGIQGHPGQPGSRGKPGHDGCNGTVGDPGDSGIPGLS
GFPGTIGVQGPKGQKGEPYILPPDIASRYRGDPGDPGLSGFLGPPGTLGIQGPVGPRGER
GRPGPPGPPGPQGPQGNRGLGFYGEKGEQGSPGPPGPPGLPTRELMGVPSDKHKGERGEP
GQKGEVGIPGVLLYAPEKGEEGVMGFPGQRGLPGINGFPGLSGERGFPGFDGPPGGYGSR
GNKGEPGEIGPPGPVSYIPSRIPRKGARGDPGLPGVSGLQGDPGEEGDRGLPGLPGFSDE
DGDKPGLPGEMGPKGEKGEEGSPAYQAGQPGFPGKHGTTGLRGPPGPPGSPGGLFGLKGQ
EGAPGRFGIQGFPGPRGQKGPKGEEGDCSECLLSEEMRRGSAGPPGPPGFPGTPGQAGRK
GEPGDQGPHGNPGYPGAKGFSGPAGFPGPKGEKGDSLYITTKGTKGIRGDPGLPGIRGED
GFPGRDGLDGLLGQPGLPGDSIRGFPGDPGYPGELGPKGFPGEAGLPGEGFPGSKGFRGP
PGDRGQDGNPGPPGLPGLPGEPGQLDCGQVIEDFSRGDGTEPIWSGAGCVRPPQGSQGKP
GLPGTTGAKGARGFPGDPGPMGFPGLNGTRGDPGREGFPGPPGFTGPRGDRGPNGLPGLQ
GHPGLTGKPGAPGATGLKGFPGEALGASAGSRGDIGLPGFPGLKGMPGDQGIPGIRGADG
SPGLPGPKGDPGPQGLPGLMGLPGTPGTRGFPGAPGNPGPGGRPGPQGLLGPPGARGEVG
EQGFPGPVGLKGLAGDKGETGYPGLQGLPGVIGPPGISGLDGFPGDRGSRGSPGIDGFKG
MTGLKGRPGIKGIKGEFGPLGAQGDKGSQGASGFKGDRGDQGPPGEPPKLMPSMMMEVKG
EKGDVGETGTKGFFGIKGSKGMPCIPGKAGTPGSPGHPSYAAGAKGDVGAKGLTGLKGYP
GPAGSPGIRGFPGSTGGRGEKGIPGTAGRYGTPGSLGEIGERGDTINLPGVPGLKGEVGV
PGLTGTRGGTGQKGEGGDPGFPGIEGLKGTQGVPGSVGQKGLPGLVGAPGQQGSPGATGS
KGEKGTPGWPGLPGQAGLPGSRGIGGLHGLPGTKGLPGSPGPDGYGSAGLPGVVGEKGEV
GEPSRLEGSRGPPGQKGDRGVP
NT seq 3667 nt   +upstreamnt  +downstreamnt
ggtggaaagacgtacacaggaccatgtggaggcagagactgcagtggaggatgtcagtgt
ttccctgaaaaaggaagccgaggccagccaggactccttggatcacaggggttcactgga
ccaccaggattgatggggatcccaggagtgcaaggtcccaaaggtcacaaaggtgaaaga
ggatatccaggaataactggacccaaaggagaagtgggccaaagaggagtcactggattc
cctggggcagatggcatacagggtcatcctgggcagccaggatcaaggggaaaaccaggt
catgatggctgtaatgggacagtaggtgaccctggtgactcaggaattcctggactctct
ggcttccctggtaccattggagtccaagggccaaagggccagaagggggagccctatata
ctgcctccagatatcgcaagccgatacaggggggatcctggggacccaggactcagtggt
tttttaggacctccaggtacactgggtattcaaggaccggttggtccaagaggagagcga
ggaagaccaggaccaccagggcccccaggaccacaaggaccacaaggcaacaggggcctt
ggcttctatggagaaaaaggtgaacaggggtctccaggtcctcctggtccacctgggctt
cctacaagagaactgatgggtgtcccttctgacaaacacaagggtgaaagaggagaacct
ggacaaaaaggagaagttggaattccaggcgtacttctctatgctcctgaaaaaggtgaa
gagggggtaatgggcttcccaggacaaaggggactgcctggcatcaatggttttccagga
ctcagtggagaaagaggttttccaggatttgatggtccaccaggtggctatggttctagg
ggaaacaagggggagccaggcgagatcggtcctccaggaccagtttcctatattccttcc
cgcatcccaaggaaaggtgcaagaggtgatccaggcttaccaggtgtttctggactacag
ggagacccaggagaggagggtgatcgtgggctgcctggtcttcctggattctctgatgag
gatggggataagccaggcttacctggagaaatgggaccaaaaggcgaaaaaggtgaagaa
ggatctcctgcttatcaggcaggccaacctgggtttccaggcaagcatggcacaacagga
ctccgtggtccacctggtccccccggatcccctggtggtctctttggattaaaaggacag
gagggagcgccaggtagatttggcatacaaggttttcctgggccaaggggacaaaaaggt
cctaagggtgaagaaggggattgcagcgaatgccttctgagtgaagaaatgagaaggggg
tctgctggcccccctggccctcctggctttccaggaacccctggccaggctgggaggaaa
ggagaacctggtgatcaagggccacatggtaatcctggctaccctggggcaaaaggattt
tcgggtccagctggatttcctggaccaaaaggagaaaagggagattctttatacataact
actaaaggcaccaaaggaattcgaggagatcccgggctgcctggtatcaggggtgaagat
ggtttcccaggcagagatggattagatggtttgctgggacagcctggccttccaggtgat
agtatccgaggtttccctggtgatcctggttatccaggtgaattaggtccaaagggcttt
ccaggagaagcaggcctgccaggtgaaggatttcctggttcaaaagggttccggggtcct
ccaggtgaccgtggacaagacggaaacccaggacctccaggtctgcctggtctgccagga
gagcctggccaactagactgcgggcaggtcattgaagacttttctagaggagatggaact
gagccaatatggtcaggtgcgggctgtgtgaggccaccacaggggtcccaaggcaagcca
ggactgccaggaaccacaggtgcaaaaggtgcaagaggattcccaggtgatccgggtcca
atgggattcccagggctaaatggtacaagaggtgatccaggtcgggaaggattcccaggt
cctccaggttttactggccccaggggagacagaggcccgaatggtctacctggactgcag
ggacacccaggccttacaggaaaacccggtgctccaggagcaacaggactgaagggcttt
cctggtgaagctttaggagcatcagcaggttcccgaggggatatcgggctccccggcttc
ccagggttgaaaggcatgccaggagatcaaggaataccgggaattagaggagcggatggt
agccctggtttgccaggaccaaagggagatccagggccacaaggtctccctggtttgatg
ggattgccaggaacaccgggaacacgtggattcccaggggcaccgggaaaccctgggcca
ggtggcaggcctggccctcaaggacttcttggtccacctggtgctaggggagaagttggt
gagcaaggttttcctggccctgtgggcctgaaaggtctggctggtgacaaaggtgaaaca
ggttacccgggattacaaggtctacctggtgtgattggtccccctggcataagcggactg
gatggctttccaggagatagaggctcaagaggttcacctggcattgatggtttcaaaggc
atgacaggcctaaaaggaagaccgggcatcaagggtatcaaaggagaatttggcccgctc
ggggctcagggtgataaaggctcacagggtgcaagcggctttaaaggtgaccgtggggat
caaggccccccaggagaaccgccaaagctgatgcccagcatgatgatggaagttaaaggt
gaaaaaggagatgttggagaaacgggcacaaagggattctttggcataaaaggtagcaag
ggaatgccatgcattcctggaaaggcaggaactccagggtcccctgggcatcccagctat
gcggctggtgcaaaaggggacgttggtgcaaaagggctgacaggtctgaaagggtatcct
ggtccagctggctctcctggcatcagaggcttccctggcagcacaggaggcaggggagaa
aagggtattccaggaactgcaggccggtatggtactcctggctcacttggtgaaataggt
gagcggggagatactataaacttaccaggagtgccaggccttaaaggagaagttggtgtg
cctggcttaacaggcacaagaggaggcacaggacaaaaaggcgaaggcggtgatcccggt
ttccctggcattgaaggtctcaagggcacacagggtgtccctggctccgtgggacagaaa
ggtttgcctggactagtcggtgctccagggcagcaaggaagccctggggctactggatca
aaaggtgaaaaaggaactcctggctggcctggcttaccaggacaagcaggcttgcctgga
tcgagaggaatcggtggactgcatggcttaccaggcactaagggcttaccaggatcacca
ggtccggatggctacggctctgcaggtcttccaggtgtagtgggtgaaaaaggagaagtg
ggagagccgagcagactggaaggcagccgaggacctccggggcagaagggagacagaggt
gttccag

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