Buceros rhinoceros silvestris (rhinoceros hornbill): 104489176
Help
Entry
104489176 CDS
T08612
Name
(RefSeq) collagen alpha-2(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
brhi
Buceros rhinoceros silvestris (rhinoceros hornbill)
Pathway
brhi04510
Focal adhesion
brhi04512
ECM-receptor interaction
brhi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
brhi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104489176
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104489176
09142 Cell motility
04820 Cytoskeleton in muscle cells
104489176
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
brhi04147
]
104489176
00536 Glycosaminoglycan binding proteins [BR:
brhi00536
]
104489176
Exosome [BR:
brhi04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
104489176
Glycosaminoglycan binding proteins [BR:
brhi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104489176
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
104489176
NCBI-ProteinID:
XP_010129606
LinkDB
All DBs
Position
Unknown
AA seq
1222 aa
AA seq
DB search
GGKTYTGPCGGRDCSGGCQCFPEKGSRGQPGLLGSQGFTGPPGLMGIPGVQGPKGHKGER
GYPGITGPKGEVGQRGVTGFPGADGIQGHPGQPGSRGKPGHDGCNGTVGDPGDSGIPGLS
GFPGTIGVQGPKGQKGEPYILPPDIASRYRGDPGDPGLSGFLGPPGTLGIQGPVGPRGER
GRPGPPGPPGPQGPQGNRGLGFYGEKGEQGSPGPPGPPGLPTRELMGVPSDKHKGERGEP
GQKGEVGIPGVLLYAPEKGEEGVMGFPGQRGLPGINGFPGLSGERGFPGFDGPPGGYGSR
GNKGEPGEIGPPGPVSYIPSRIPRKGARGDPGLPGVSGLQGDPGEEGDRGLPGLPGFSDE
DGDKPGLPGEMGPKGEKGEEGSPAYQAGQPGFPGKHGTTGLRGPPGPPGSPGGLFGLKGQ
EGAPGRFGIQGFPGPRGQKGPKGEEGDCSECLLSEEMRRGSAGPPGPPGFPGTPGQAGRK
GEPGDQGPHGNPGYPGAKGFSGPAGFPGPKGEKGDSLYITTKGTKGIRGDPGLPGIRGED
GFPGRDGLDGLLGQPGLPGDSIRGFPGDPGYPGELGPKGFPGEAGLPGEGFPGSKGFRGP
PGDRGQDGNPGPPGLPGLPGEPGQLDCGQVIEDFSRGDGTEPIWSGAGCVRPPQGSQGKP
GLPGTTGAKGARGFPGDPGPMGFPGLNGTRGDPGREGFPGPPGFTGPRGDRGPNGLPGLQ
GHPGLTGKPGAPGATGLKGFPGEALGASAGSRGDIGLPGFPGLKGMPGDQGIPGIRGADG
SPGLPGPKGDPGPQGLPGLMGLPGTPGTRGFPGAPGNPGPGGRPGPQGLLGPPGARGEVG
EQGFPGPVGLKGLAGDKGETGYPGLQGLPGVIGPPGISGLDGFPGDRGSRGSPGIDGFKG
MTGLKGRPGIKGIKGEFGPLGAQGDKGSQGASGFKGDRGDQGPPGEPPKLMPSMMMEVKG
EKGDVGETGTKGFFGIKGSKGMPCIPGKAGTPGSPGHPSYAAGAKGDVGAKGLTGLKGYP
GPAGSPGIRGFPGSTGGRGEKGIPGTAGRYGTPGSLGEIGERGDTINLPGVPGLKGEVGV
PGLTGTRGGTGQKGEGGDPGFPGIEGLKGTQGVPGSVGQKGLPGLVGAPGQQGSPGATGS
KGEKGTPGWPGLPGQAGLPGSRGIGGLHGLPGTKGLPGSPGPDGYGSAGLPGVVGEKGEV
GEPSRLEGSRGPPGQKGDRGVP
NT seq
3667 nt
NT seq
+upstream
nt +downstream
nt
ggtggaaagacgtacacaggaccatgtggaggcagagactgcagtggaggatgtcagtgt
ttccctgaaaaaggaagccgaggccagccaggactccttggatcacaggggttcactgga
ccaccaggattgatggggatcccaggagtgcaaggtcccaaaggtcacaaaggtgaaaga
ggatatccaggaataactggacccaaaggagaagtgggccaaagaggagtcactggattc
cctggggcagatggcatacagggtcatcctgggcagccaggatcaaggggaaaaccaggt
catgatggctgtaatgggacagtaggtgaccctggtgactcaggaattcctggactctct
ggcttccctggtaccattggagtccaagggccaaagggccagaagggggagccctatata
ctgcctccagatatcgcaagccgatacaggggggatcctggggacccaggactcagtggt
tttttaggacctccaggtacactgggtattcaaggaccggttggtccaagaggagagcga
ggaagaccaggaccaccagggcccccaggaccacaaggaccacaaggcaacaggggcctt
ggcttctatggagaaaaaggtgaacaggggtctccaggtcctcctggtccacctgggctt
cctacaagagaactgatgggtgtcccttctgacaaacacaagggtgaaagaggagaacct
ggacaaaaaggagaagttggaattccaggcgtacttctctatgctcctgaaaaaggtgaa
gagggggtaatgggcttcccaggacaaaggggactgcctggcatcaatggttttccagga
ctcagtggagaaagaggttttccaggatttgatggtccaccaggtggctatggttctagg
ggaaacaagggggagccaggcgagatcggtcctccaggaccagtttcctatattccttcc
cgcatcccaaggaaaggtgcaagaggtgatccaggcttaccaggtgtttctggactacag
ggagacccaggagaggagggtgatcgtgggctgcctggtcttcctggattctctgatgag
gatggggataagccaggcttacctggagaaatgggaccaaaaggcgaaaaaggtgaagaa
ggatctcctgcttatcaggcaggccaacctgggtttccaggcaagcatggcacaacagga
ctccgtggtccacctggtccccccggatcccctggtggtctctttggattaaaaggacag
gagggagcgccaggtagatttggcatacaaggttttcctgggccaaggggacaaaaaggt
cctaagggtgaagaaggggattgcagcgaatgccttctgagtgaagaaatgagaaggggg
tctgctggcccccctggccctcctggctttccaggaacccctggccaggctgggaggaaa
ggagaacctggtgatcaagggccacatggtaatcctggctaccctggggcaaaaggattt
tcgggtccagctggatttcctggaccaaaaggagaaaagggagattctttatacataact
actaaaggcaccaaaggaattcgaggagatcccgggctgcctggtatcaggggtgaagat
ggtttcccaggcagagatggattagatggtttgctgggacagcctggccttccaggtgat
agtatccgaggtttccctggtgatcctggttatccaggtgaattaggtccaaagggcttt
ccaggagaagcaggcctgccaggtgaaggatttcctggttcaaaagggttccggggtcct
ccaggtgaccgtggacaagacggaaacccaggacctccaggtctgcctggtctgccagga
gagcctggccaactagactgcgggcaggtcattgaagacttttctagaggagatggaact
gagccaatatggtcaggtgcgggctgtgtgaggccaccacaggggtcccaaggcaagcca
ggactgccaggaaccacaggtgcaaaaggtgcaagaggattcccaggtgatccgggtcca
atgggattcccagggctaaatggtacaagaggtgatccaggtcgggaaggattcccaggt
cctccaggttttactggccccaggggagacagaggcccgaatggtctacctggactgcag
ggacacccaggccttacaggaaaacccggtgctccaggagcaacaggactgaagggcttt
cctggtgaagctttaggagcatcagcaggttcccgaggggatatcgggctccccggcttc
ccagggttgaaaggcatgccaggagatcaaggaataccgggaattagaggagcggatggt
agccctggtttgccaggaccaaagggagatccagggccacaaggtctccctggtttgatg
ggattgccaggaacaccgggaacacgtggattcccaggggcaccgggaaaccctgggcca
ggtggcaggcctggccctcaaggacttcttggtccacctggtgctaggggagaagttggt
gagcaaggttttcctggccctgtgggcctgaaaggtctggctggtgacaaaggtgaaaca
ggttacccgggattacaaggtctacctggtgtgattggtccccctggcataagcggactg
gatggctttccaggagatagaggctcaagaggttcacctggcattgatggtttcaaaggc
atgacaggcctaaaaggaagaccgggcatcaagggtatcaaaggagaatttggcccgctc
ggggctcagggtgataaaggctcacagggtgcaagcggctttaaaggtgaccgtggggat
caaggccccccaggagaaccgccaaagctgatgcccagcatgatgatggaagttaaaggt
gaaaaaggagatgttggagaaacgggcacaaagggattctttggcataaaaggtagcaag
ggaatgccatgcattcctggaaaggcaggaactccagggtcccctgggcatcccagctat
gcggctggtgcaaaaggggacgttggtgcaaaagggctgacaggtctgaaagggtatcct
ggtccagctggctctcctggcatcagaggcttccctggcagcacaggaggcaggggagaa
aagggtattccaggaactgcaggccggtatggtactcctggctcacttggtgaaataggt
gagcggggagatactataaacttaccaggagtgccaggccttaaaggagaagttggtgtg
cctggcttaacaggcacaagaggaggcacaggacaaaaaggcgaaggcggtgatcccggt
ttccctggcattgaaggtctcaagggcacacagggtgtccctggctccgtgggacagaaa
ggtttgcctggactagtcggtgctccagggcagcaaggaagccctggggctactggatca
aaaggtgaaaaaggaactcctggctggcctggcttaccaggacaagcaggcttgcctgga
tcgagaggaatcggtggactgcatggcttaccaggcactaagggcttaccaggatcacca
ggtccggatggctacggctctgcaggtcttccaggtgtagtgggtgaaaaaggagaagtg
ggagagccgagcagactggaaggcagccgaggacctccggggcagaagggagacagaggt
gttccag
DBGET
integrated database retrieval system
