Buceros rhinoceros silvestris (rhinoceros hornbill): 104489223
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Entry
104489223 CDS
T08612
Symbol
USP4
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 4
KO
K11835
ubiquitin carboxyl-terminal hydrolase 4/11 [EC:
3.4.19.12
]
Organism
brhi
Buceros rhinoceros silvestris (rhinoceros hornbill)
Brite
KEGG Orthology (KO) [BR:
brhi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
brhi01002
]
104489223 (USP4)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
brhi04121
]
104489223 (USP4)
Enzymes [BR:
brhi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104489223 (USP4)
Peptidases and inhibitors [BR:
brhi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104489223 (USP4)
Ubiquitin system [BR:
brhi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104489223 (USP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
Ubiquitin_3
DUSP
UCH_1
USP7_C2
Choline_bind_1
Motif
Other DBs
NCBI-GeneID:
104489223
NCBI-ProteinID:
XP_010129668
LinkDB
All DBs
Position
Unknown
AA seq
891 aa
AA seq
DB search
GFDSWDMSDEGDIDVFPGPVDNSGLFSDPKTQSLKEHLIDELDYVMVPTEAWNKLVAWYG
CMDGQEPVVRKVVEYGVFAKHYKVEVYLLELKLCKSSDPDKVISCHFSRVDTIASIEKEM
RKLFNIPAEKETRLWNKYLGNTYERLGNLDSTVQDAGLFQGQIVLIEVKKEDGTWPEHYT
LAESSTATSRNFTTSSKSSASSYSSVSATSVITNGDSSNSYGLNSSHLGRGGSGFVCNSY
NCRDSASLTQPGLCGLSNLGNTCFMNSALQCLSNTPPLTDYFLEDKYEAEINQNNPLGMR
GEIAEAYAELIKQIWSGRQSHVAPRVFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHED
LNRVKKKPYLELKDANGRPDSEVAKEAWENHRLRNDSIIVDIFHGLFKSTLVCPKCSKVS
VTFDPFCYLTLPLPLRRDRLMEVTLVYADPQRRPVQYRVVVPMMGAISDLCESLSKLSGV
PAENMVVTDVYNHRFHKIFQMDEGLNHIMPKDDIFVYEVCKPSEDGLESVTLSVYFREKM
MRQSSNTSGTVLFGQPLLISVPKHKLTVDHLYNVILEQISRYVKLPLVEEYSTPCPDKGT
CNGSNGVDEGDIEEMEHQDGGQEGKEKLAEVDPCHSEGCMQIESARDLQPCKKQHFTFSL
VNSSGTSEINSIVEGKILKLNAFSALAIDWDSDTRRLLFDEQEAQAFEKHASMLQPQKKK
AVVALRDCIELFTTMETLGEHDPWYCPNCKKHQQATKKFDLWSLPRILVVHLKRFSYSRY
WRDKLDTVVEFPIRGLNMSEFVCDPRAGSYVYDLIAVSNHYGAMGVGHYTAYAKNKVNDK
WYYFDDSSVSLASEDQIVTKAAYVLFYQRRNCEEHTAPSPPQEECDGMDTN
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
ggcttcgacagctgggacatgtccgacgagggcgatatcgacgtcttccccgggcctgtc
gacaactctggtctcttcagcgatccaaaaacgcagagtttaaaagaacacctcattgat
gagctagattatgtaatggttcccaccgaagcctggaataaactagtagcgtggtatggc
tgcatggatggacaggagcctgttgtgagaaaggtggtggaatatggtgtgtttgcgaag
cactataaggttgaagtttatcttcttgagttgaagctgtgtaagagcagcgatcccgac
aaggtgattagctgccacttcagcagagttgataccattgcttccatcgagaaagaaatg
agaaaactgtttaatatcccagccgagaaggaaactaggttatggaacaagtatctgggt
aacacctatgagcggctcggcaatctggatagtacagttcaagatgcggggctctttcag
ggccagatcgttctaatagaagtgaagaaggaagatggcacatggcctgaacactatacc
ctggcagaatcaagcactgcaactagcagaaactttactacctcttcaaaatcatcagca
agttcttattcctcagtgtctgccacttctgtcattactaacggtgatagcagtaactcc
tatggactgaacagctcccacctgggcaggggaggttctggattcgtctgtaactcttac
aactgcagagacagtgcttctctgacacaacctggactctgtggactcagtaaccttgga
aatacctgcttcatgaattctgcgttacagtgtctgagcaataccccccctctgactgac
tatttcctggaagataaatatgaagctgaaataaatcagaacaatccgctggggatgaga
ggagaaattgcagaagcctatgcggagctcattaaacagatctggtctgggaggcagtct
cacgtggccccacgtgtgtttaaaacacaggtcggccgatttgctcctcagttttcggga
taccagcagcaagattcgcaggagctcttggcttttcttctagatggcttgcatgaggat
ttgaacagagtgaagaagaagccctacttggagctgaaggatgccaatggcagacctgat
tcggaggtggcaaaagaagcctgggagaatcataggctgaggaatgattctatcattgtg
gatatttttcatggtcttttcaaatctactcttgtttgtcccaaatgctccaaagtttct
gtgacatttgatcccttttgttacttaactcttccactgcccttgaggcgagatcggctc
atggaagttactctggtatatgcagacccacagcgccgacctgtccagtaccgggttgtg
gtgccgatgatgggggccatctcagatctgtgtgaatcactctccaaactctctggtgtt
cctgcagaaaatatggtggtgacagacgtgtataatcatcgattccacaaaattttccaa
atggatgaaggtttaaatcatatcatgccaaaagacgacatctttgtgtatgaagtttgc
aagccaagtgaggatggcttggagtctgttactctctctgtttactttcgggaaaagatg
atgaggcaatccagcaatacttcggggactgtactctttggtcagccactgttaatatcg
gtgccgaagcacaagctcactgtggatcacttgtacaatgtcattttggagcagatcagc
cgctatgtgaaactccctttggtggaagaatactctacaccctgcccagacaaaggaacc
tgcaatggctccaacggtgtggatgaaggtgacattgaagagatggagcatcaggatgga
gggcaggaaggcaaggaaaagctggcagaagttgatccctgtcactctgagggttgtatg
cagattgagtcagcaagagacctgcagccttgcaagaagcagcatttcacttttagcctc
gtgaattcctctgggacctctgagataaactccattgtagaaggaaaaatcttaaaattg
aatgctttttctgcgcttgctattgactgggattctgatacacggaggctgctttttgat
gagcaggaggcacaggcgtttgaaaaacacgcgagtatgttgcagccacagaagaagaag
gctgtggtagccctcagagactgcatagagctcttcactactatggagacgcttggtgaa
catgacccgtggtactgccccaactgtaagaaacatcagcaggccacaaagaaattcgac
ttgtggtctttgcccaggattttggttgtgcatttaaaacgcttctcatacagcagatac
tggagagataaacttgatactgttgtggaattccctatcaggggtttaaacatgtcggag
tttgtctgcgaccccagagcaggctcgtatgtgtatgacctcattgcagtttccaatcac
tatggagccatgggagtaggccactacactgcctacgcaaagaacaaagtgaatgacaag
tggtactactttgatgacagcagtgtctcgttggcttcagaagaccaaatagtgacaaaa
gctgcgtatgtgctgttttatcagcgccgaaactgtgaggaacataccgccccatctcct
ccccaagaagagtgtgatggcatggataccaactaa
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