Buceros rhinoceros silvestris (rhinoceros hornbill): 104489224
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Entry
104489224 CDS
T08612
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
brhi
Buceros rhinoceros silvestris (rhinoceros hornbill)
Pathway
brhi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
brhi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104489224 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brhi03019
]
104489224 (EDC4)
Messenger RNA biogenesis [BR:
brhi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104489224 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
104489224 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
WD40
WD40_WDHD1_1st
Beta-prop_EDC4L
Beta-prop_HPS5
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_Prp19
WDR55
INTS5_N
DUF445
Motif
Other DBs
NCBI-GeneID:
104489224
NCBI-ProteinID:
XP_010129669
LinkDB
All DBs
Position
Unknown
AA seq
1197 aa
AA seq
DB search
SVNETQRPSSSYNGDLNGLLVPDPIVAGDGPSLAKPVHRSVSLGALQEKQVICLSGDDSS
TCVVISAKDVEIVASSDSSITSKARGSNKVKIQPVARYEWEQKYYCGNLIAVSNSYLAYV
IRVPSNGSAMVRVLSISTAERTLLKGFTGGVADLAFAHLNSNQLACLDEAGNLFVWRLAM
DKEKIQEEILVHIKRPDNTPLNTSRRIIWCPFIPDDNEESGEEGSQTLALLHEDRAEVWD
LDIIRTNNSSWPVEVPNIKEGFIVVKGHSTCLSEGALSPDGTVLATASHDGFVKFWQIYI
EGQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQDPEVPFWRFLITGADQNRELKMWCTVSW
TCLQTVRFSPDIFSSMSVLPSLKVCLDLSAEYLILSDVQRKVLYVMELMQNQEEGKAHFS
SISEFLLTHPVLSFGIQAVSRCRLRHTEVLPAEEENDSLSVEGAQGAGAVESAAGELIKL
FCVHTKALQDVQIRFQPLHSPDMSASVPSHSTHEEFAFPDHMADLNAEGLGSEKGSVHGS
QPDLRRITDLPVPSDFLSLSNDTKPKLMTPDAFMTPSTSLQQVTGEPARSSSLSRLKSSS
SVSSLTAVTAMSSTSVTDTSMPRPTEDLTVSPKMQLDSSLTLSSSSSSLQTSPRSHPVLI
PGLPDKLTPKAPVPVTAGNSSLALELQEVEPLVVPQASPTRERSPDVISSASTAMSQDIP
EIASETLQRSFAAAPSGLPVEVLEPGHHADSMASADSALHLLSPRNRHNSEHSHHSLDMP
PVEVDRLNAPSLLETALTQENASSDSVVSQPWPAAPDITRETRNSMADSPRDEVEEKHKS
SSYHRHSYHLLQHDSQDASAEQSDHDDEVASLASTSGGFGAKASTQRLPVKDWKAKASPR
ASPKLKRKGKKDDGDVNQSPRSSNNQVTPEFQDELMCILRSQQRELSELRQNQMELLQRL
TDHLDAIQSSLMGHVERVIDSQQEQEQRRLDRALTEGQQLNGQLQEHLSQQLSQSLSTAV
CNRLERTVREEMKKTIPQCISKSLDPVAGQLSNTIAAKLTALTAVEGSLKESITKLVKSK
NLTDTIVRATADTLQGPIQSAYREAFQSVVLPAFEKSCQSMFQQINDTFKQGTQEYIQQV
ETHLKNKKAREQEARDPLLNQLRQLLSTFQSSTEQLASTVAASVHTEVQHQLHILVS
NT seq
3595 nt
NT seq
+upstream
nt +downstream
nt
gctcagtgaatgagacccagagaccgtccagttcgtacaacggagacctgaacgggctgc
tggtgcctgatcccatcgtggccggggatggaccgtccctggcgaagccggtgcatcgca
gcgtctctttgggagccctgcaggagaagcaagtcatttgcctttccggagatgacagct
ccacctgcgtcgtgatatcagcaaaagatgtggagatcgtggccagcagtgattccagca
tcaccagtaaggccagagggagtaacaaggtgaaaatacagcctgtcgctaggtacgagt
gggagcagaaatactactgtggcaacctgatagctgtttccaactcctacctggcctatg
tcattagagttcccagcaatggctctgccatggtgcgggtgctgagcatcagcacggccg
agcggaccttgctgaagggattcacgggcggtgtggccgacctggcttttgctcatctca
actccaaccagctggcgtgcctggatgaggccggaaacctgttcgtctggcgcctggcca
tggataaagaaaagatccaagaggagatcttggtccacatcaagcgacctgacaacaccc
cgttgaacacctctcgaagaatcatctggtgtcctttcatcccagatgataatgaggaga
gtggtgaagagggaagtcagacgctggcgttgctgcatgaggacagggcagaggtgtggg
atctggacatcatccggacaaacaacagctcctggccggtggaagtgccgaacatcaaag
agggcttcatcgtggtgaagggccacagcacgtgcctgagcgagggagcgctttctccag
acggaactgtgctggccacggcgagccacgacggcttcgtcaaattctggcagatctata
ttgaggggcaagatgagcccaggtgtctccatgagtggaaaccccatgacgggaggcctc
tttcctgcctgctcttctgcgacaaccacaagaaacaagacccagaggtccccttctgga
gatttctcatcacgggggctgatcagaacagggaactgaagatgtggtgcactgtgtcgt
ggacctgcctgcagaccgtccgcttttctcctgacatcttcagctccatgagcgttcttc
ccagcctgaaagtctgcctggacctctccgctgaatacctgatactgagtgatgtgcaga
gaaaagtcttgtatgtgatggagctgatgcagaaccaggaggagggcaaagctcacttca
gctccatctcggagttcctccttacccacccagtcctaagcttcggcatccaggcggtga
gccgctgccggctgaggcacaccgaagtgctcccagcagaagaggaaaatgacagcttga
gtgtggaaggtgctcagggagccggggctgtcgagtcggcagcaggcgagctgataaaac
tcttctgtgtccacaccaaggccctccaggatgtgcagattcgattccagcccctccaca
gccccgacatgagcgcgtccgtgccttcccacagcactcacgaggagtttgcctttccag
accacatggctgatctgaatgcagaagggctcggatccgagaaagggtcggtgcacggct
ctcagccggacctgcggcgcatcaccgacctgcctgtaccctcagactttctgtctctct
caaatgacaccaaacctaagctgatgactccagatgcattcatgacaccaagcacgtctc
ttcaacaggtaaccggagagcctgcgaggagcagctcactctccaggttaaagagtagca
gcagtgtcagctccctgacggcagtcacggccatgagcagcacttctgtcacggacacct
ctatgcccaggccaacggaagacttgaccgtgagtcccaagatgcagctggacagcagcc
tgacgctgagcagcagcagcagcagtctccagaccagtcccaggagccaccccgttctta
tcccaggcctccctgacaagctgacaccaaaggcacccgttccagtcacggcaggaaact
cctctctagcactggaactgcaggaggtggagcccttggtggtgccccaggcttctccca
cccgcgagcgctcgccagatgtcatttcctctgcttccacagccatgtcccaagacatcc
ccgagattgcttccgagaccttgcagcgcagctttgcggcagccccctccgggctccccg
tggaggtgctggagcccggtcaccacgcagacagtatggcatccgctgactcagccttgc
acttgctgtctccgaggaaccggcacaattccgagcacagccaccactccttggacatgc
ctccagtggaggtggacagactgaatgccccgtccttactggagactgctttaactcagg
aaaacgcgtcttcagacagcgtcgtgagtcagccgtggccggcagctcccgacatcacca
gggagaccaggaacagcatggctgacagcccaagggatgaggttgaagaaaagcacaaga
gctcttcctatcatcgacacagctaccacctgctgcagcacgacagccaggacgccagcg
cggagcaaagtgaccatgacgatgaagttgccagcttggcttctacgtcgggtggatttg
gtgccaaagcgtctacacagaggctgcctgtgaaggactggaaagccaaggcatcccccc
gggcctccccaaagctaaagcggaagggcaagaaagatgacggggacgtgaaccagtcgc
cgagatcgtccaacaaccaggtgacaccggagttccaggacgagctgatgtgcatcctga
ggagccagcagcgggagctctccgagctgcgtcagaaccagatggagctgctgcagaggc
tcacggaccacctcgacgccatccagagctccctcatgggccacgtggagagggtgatcg
actcccagcaggagcaggagcagagaagactagatcgagcactgacagagggacagcagc
tcaacgggcagctccaggagcatctgtctcagcagctctctcagtccctttccacggcgg
tgtgtaaccgtctggagaggaccgttcgcgaggagatgaagaagaccataccccagtgca
tctccaagagcttggaccccgtcgctggccagctgagtaacaccattgcggccaagctca
ctgctctcactgctgtggagggctcgctgaaagagagcatcaccaagctggtgaagtcaa
agaacctcacagacaccatcgtgagggccacggccgataccctgcaggggccgatccagt
ctgcttacagggaagcgttccagagcgtggtgttgccagccttcgagaagagctgccagt
ccatgttccagcagatcaacgacaccttcaagcagggcacgcaggaatatatccagcagg
tggagactcacttgaagaacaagaaggcgcgggaacaggaggcccgggacccgctgctga
atcagcttcgccagctcctcagcaccttccagagcagcaccgagcagctggcttccacgg
tggccgccagcgtccacaccgaggtgcagcaccagctgcacatcctcgtgagcaa
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integrated database retrieval system
