Buceros rhinoceros silvestris (rhinoceros hornbill): 104489609
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Entry
104489609 CDS
T08612
Symbol
NPC1
Name
(RefSeq) Niemann-Pick C1 protein
KO
K12385
Niemann-Pick C1 protein
Organism
brhi
Buceros rhinoceros silvestris (rhinoceros hornbill)
Pathway
brhi03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
brhi04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
brhi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
104489609 (NPC1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
104489609 (NPC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
brhi02000
]
104489609 (NPC1)
Transporters [BR:
brhi02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
104489609 (NPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPC1_MLD
NPC1_N
Sterol-sensing
Patched
MMPL
ACR_tran
Motif
Other DBs
NCBI-GeneID:
104489609
NCBI-ProteinID:
XP_010130086
LinkDB
All DBs
Position
Unknown
AA seq
1337 aa
AA seq
DB search
LFLREPSLLDSVPGGTEGGAGVRGSPVTQQTRLGALEARKRACRGLANFSCSPVLVPCYC
IQQQLSLCCALVMQCPVHVLSQLCVWYGECGVASGDKRYNCAYDGPPIALPEDGYELMQE
LCPGLFFGNVSTCCDVHQLQTLKNNLQLPLQFLSRCPSCFYNLINLFCELTCSPNQSDFL
NVTSTIPYYDPILKENKSSITELQYFIGEHFTNAMYNACKDVEAPSSNVKALGLLCGKDV
KDCNATNWIEYMFSKDNGQTPFSIVPIFSDFPVHGMNPMNNATKGCNESVDDSTGPCSCQ
DCSIVCGPKPQPPPLPVPWLLFGLDAVYVIMWISYMGFLLIFFALVFGVWCYRRRHFVSE
YTPIDSNIAFSVNSHRDNGKITCGEKLGERFENGLRMTFTSWGAFCVRNPRPVILFSVVF
IAMCCSGFVYVRATTNPVDLWSAPSSQARKEKDYFDTHFGPFFRTEQLIIQAPNSHPDTY
SPYPSGADVPFGPPLTKEILHQVLDLQDAIVNITASFDNETVMLKDICVAPLAPYNNNCT
ILSVLNYFQNSHSVLDHATGDEFFVYADYHTHFLYCVRAPASLNDTSLLHDPCLGTFGGP
VFPWLVLGGYDDDNYNNATALVITFPVNNYYNDSRKLMKALAWEKEFINFLKNYNNPNLT
ISFSAERSIEDEINRESNSDVSTVLISYIVMFVYISIALGHIQSWRRLLVDSKISLGIAG
ILIVLSSVACSIGIFSYFGIPLTLIVIEVIPFLVLAIGVDNIFILVQTLQRDERLQGETL
DKQIGRVLGDVAPSMFLSSLSETVAFFLGTLSTMPAVRTFSLFAGMAVLIDFVLQVTCFV
SLLGLDIKRQEGNRLDILCCIKNNEEMSGVQRSESILFQFFKNLYSPYLLKDWMRPIVIA
VFVGVLSFSTAVVHNIEIGLDQSLSMPDDSYVMDYFSQLSKYLHAGPPVYFVLEEGHNYT
SLEGQNMVCGGMGCNNDSLVQQVFNAAEISSYTRIGYAPSSWIDDYFDWVKPQSSCCRVY
NTTGQFCNASVVNPSCTRCRPLTQEGKQRPQGKDFMTFLPMFLSDNPNPQCGKGGHAAYN
SAVNFINNKSDVGATYFMTYHTVLKTSSDFIDAMKKARVIADNITETMGIKEKNYRVFPY
SVFYVFYEQYLTIVHDAIFNLCISLGSVFLVTAVLLGFDIWAAVVVSATIAMIIINMFGV
MWLWGISLNAVSLVNLVMSCGIAVEFCSHVTRAFTVSTKGSRVERAEEALSHMGSSVFSG
ITLTKFGGIVVLAFSKSQIFKVFYFRMYLAMVLLGATHGLIFLPVLLSYIGPSINKAKIH
AAQERTRGTEREKLLYF
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
ctcttcctacgtgagccctcactcctggactcggtgccgggtgggacggagggaggagcc
ggagtgcggggcagcccggtgacacagcagacccgcctgggagcacttgaggcgcgaaag
cgggcgtgccggggcttagcaaacttcagctgcagcccggtcctagtcccctgctattgc
atacagcagcagctgtccctgtgttgtgccctggttatgcaatgccctgtgcatgtactt
tcacaactgtgtgtctggtatggggaatgtggagttgcttctggagacaagagatacaac
tgtgcttatgatggaccaccaatagcactaccagaggacggctatgaattaatgcaggaa
ctctgtccaggtttattcttcggcaatgttagcacttgctgtgatgttcatcagcttcag
actttgaaaaacaacttgcagctgcctctgcagtttctctccagatgtccatcatgtttt
tacaacttgataaacctcttctgtgaactgacttgcagtccaaatcagtctgactttttg
aatgttacaagcaccataccttattatgatccaattctaaaagagaacaaaagtagcatt
acagagctgcagtactttattggagaacacttcacaaatgcaatgtataacgcctgcaaa
gatgtggaggctccgtcgagtaatgttaaagcactggggctgttgtgtgggaaggatgtc
aaggactgtaatgcgaccaactggattgagtacatgtttagtaaagacaatggacaaact
cctttcagcattgttcctatattttcagattttcctgtccatggaatgaatcctatgaac
aatgctactaaaggctgtaatgagtctgtggatgattcgacaggaccgtgcagctgtcag
gactgttccattgtttgtggtccaaagcctcagccccctccattgcccgttccttggctt
ttgtttggtttggatgctgtgtatgtcatcatgtggatctcctacatgggatttctactc
atattttttgcactagtttttggagtctggtgttacaggaggcggcactttgtctcagag
tacacaccaattgacagcaatatagcgttttctgtgaattcccatcgtgacaacgggaaa
attacatgtggtgaaaagcttggtgaaaggtttgagaatggcctaaggatgacattcaca
tcgtggggggctttctgtgtcagaaatccacgtcccgttatcctcttctctgtggtcttc
attgcaatgtgctgctcaggctttgtatatgttagagcaactacaaaccctgtagatctc
tggtcagccccaagcagccaagctcgcaaggagaaggactactttgacacacactttggc
cctttctttcgtaccgaacaacttattattcaagcaccaaacagccatccagacacctat
tcgccttatccatcaggagcagatgtaccttttgggcctccgcttaccaaagagattctc
catcaggtactagatttgcaggatgctattgtcaacataactgcttcttttgacaatgag
actgtaatgctgaaagacatttgcgtggctcctcttgctccctacaacaacaactgcact
atactgagtgtactcaactattttcagaacagtcattctgttctagatcacgctactggg
gatgagttctttgtctatgctgattaccacactcacttcttatactgtgttcgggctcca
gcatcactgaatgatacaagcttgcttcacgatccctgcttaggaacatttggtggacct
gtatttccatggttggtgttgggaggatatgatgatgacaactataataatgctacggct
ctcgttattacttttcctgtcaacaattactacaatgactcaagaaagctaatgaaagcc
ttggcatgggaaaaagagtttattaactttttgaagaactataataatccaaacttaacc
atatcgttttctgctgaacggagtattgaagacgaaatcaatcgtgaaagcaacagtgat
gttagcactgtgttgataagctatatcgtaatgtttgtgtacatctccatagccttggga
catatccagagctggagaagactgctggtggattcaaagatctccctgggcattgcaggc
atcctgattgtactaagctcagtggcgtgttctataggcattttcagctactttggaatc
ccactgacactgattgtgatagaagtaattcccttcctggtgctggctattggggtggac
aacattttcattctagtccagacacttcagagagatgagcgccttcagggtgaaactctg
gataaacagattggcagagtcttgggagatgtggcacccagtatgtttctctcatctctt
tcggagactgtggcattctttcttgggacactgtctacgatgccagcagtccgcacattt
tccctgtttgctggaatggctgtgctaatagactttgttcttcaagtcacttgctttgta
agtctcctgggcttggatattaagcgtcaagaggggaatagactggatattctgtgttgc
atcaaaaacaatgaagaaatgagtggagtccaacgttctgagagcatcttatttcagttc
ttcaaaaacctgtattctccatatctgcttaaggattggatgagaccaatagtaatagca
gtgtttgtgggtgttctgtcattcagtacagcagttgtgcacaacatagagattggactg
gatcagtctctctccatgccagatgactcttatgtaatggattacttcagccagcttagc
aagtacctgcatgcaggtcctcctgtctactttgtcctagaagaagggcacaactatacc
tccttggaagggcagaacatggtgtgtggtggaatgggatgtaataatgattcacttgtc
cagcaagtcttcaatgctgcagaaatcagtagctacacaaggataggctatgccccatca
tcctggatcgatgactactttgactgggtgaagccacagtcatcctgttgcagggtctac
aatactactggacagttttgcaatgcttcagttgtcaatccatcctgcactcgttgtcga
ccactgactcaagaaggcaagcagagaccgcagggcaaagactttatgacatttttgcca
atgttcctatcagacaaccctaatcctcagtgtggcaaagggggacatgctgcatataat
tctgctgtcaactttataaacaacaaatctgatgttggagcaacttattttatgacttac
catactgtactgaaaacatcatctgattttattgatgctatgaagaaagctcgggttata
gcagataacattactgaaacaatgggcatcaaagagaagaactaccgggtgtttccttac
agtgtattttatgtcttctatgagcaatacctgacaattgtgcatgatgctatcttcaac
ctctgtatcagcttgggatcagtatttttagtgacagctgtgctgcttggttttgacata
tgggctgctgttgtagtttcagcgactattgctatgataatcatcaacatgtttggagtg
atgtggctctggggcatcagcttgaatgcagtttcattagtaaatcttgtcatgagctgt
ggtatcgctgtggaattctgcagtcatgttacaagagcgttcactgttagtactaagggc
agtagagtagagcgagcggaagaagctctgtctcacatgggcagttcagttttcagtggt
atcacgctgaccaaatttggaggaattgtagtactggctttttccaaatcccagattttc
aaggtgttttacttcaggatgtatctagctatggttctgctaggagcaacacacggacta
atatttctgccagttctgcttagttacataggcccatcaataaataaagctaaaattcat
gctgcacaagagaggaccagaggtacagaacgggagaaactcctctacttctag
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integrated database retrieval system
