Buceros rhinoceros silvestris (rhinoceros hornbill): 104489728
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Entry
104489728 CDS
T08612
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
brhi
Buceros rhinoceros silvestris (rhinoceros hornbill)
Pathway
brhi03440
Homologous recombination
brhi03450
Non-homologous end-joining
brhi04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
brhi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104489728 (RAD50)
03450 Non-homologous end-joining
104489728 (RAD50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
104489728 (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
brhi03032
]
104489728 (RAD50)
03400 DNA repair and recombination proteins [BR:
brhi03400
]
104489728 (RAD50)
DNA replication proteins [BR:
brhi03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
104489728 (RAD50)
DNA repair and recombination proteins [BR:
brhi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
104489728 (RAD50)
BRCA1-C complex
104489728 (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
104489728 (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
AAA_15
SbcC_Walker_B
SMC_N
NPV_P10
AAA_29
AAA_24
DUF2703
AAA_13
Motif
Other DBs
NCBI-GeneID:
104489728
NCBI-ProteinID:
XP_010130226
UniProt:
A0A091GX79
LinkDB
All DBs
Position
Unknown
AA seq
1312 aa
AA seq
DB search
MSKIEKMSILGVRSFGVEDKDKQIITFFNPLTILVGPNGAGKTTIIECLKYISTGDFPPG
TKGNSFVHDPKVANETDVRAQIRLQFRDVNGELLAVQRSMVCTQKGKKTEFKTLESVITR
MKHGEKVSLSSKCAEIDREMISALGVSKSVINNVIFCHQEESNWPLSEGKALKQKFDEIF
SATRYIKALETLRQVRMKQGLKVKECQTELKYLKQNKEKAQEIQEQLSNREAQLAASKEN
VKTIESQLEPLKSSLAAVEQNLIKVVRLESEIKTQESRRRQMEKDNQDLQQKMEKVFQGT
DEQLRDRYQNHQRTVKEKEARLLDCKRELDRATKECQRFNSEKSELLMEQGRLQQQADRH
QEHIALRDSLIQALAAQLEFDGFERTPFSERHVTNFHTLLKKRQEKDAEVADHLMREFAR
KEAMKQRQIDEIRDKKTGLERTIDLKSDIQNKKQVELKNVKRELQQLEGFSDRILELDRE
IAKTEHELEKAERSSNVETLEREIGTLQNEKINLDKVLRELDQEMKQLNLHTTTITQMEM
LTKDKADKEEQIRKVKSRHSDELTSLLGYFPNKKQLEDWLHGKNREINQTRDNLAALNKR
LASVEYDKSYAIDELRKKEAQLSHHEAQIFDVCGSQDFDSDLNKLQDEIEKSSKQRAVLA
GATAVYSQFVTQLTEGNQSCCPVCQREFQTEAELQDVISDLQSKLRLAPDKLKSTESELK
RKEKRRDEMMSLKPLRQTVAELLDKDIPALRNKIQHANRDLTTLKGEIEEQELLLRTALT
EVDGAKECLQDITLMERYQTDIRDVERKIAQQESKLVGVKLSRTVLQVSHEKEEKKHLWD
TVTSKIELNQKLKQDQQNQIQQLKSTVNELKAEKLQISSSMQRRRQLEEQTVELTTEVQS
LCREIKEAKEQVFPLDATLEKLQQEKEDLVNKRTASNKEAQEKISGIKEKVKDINKYVKE
IENYIQQRKDDYKKQKESELDEVNSQLAAYEKQKEKISKEMETIRQDIDTQKIQERWLED
NLTLRKRNEELKGVEDNIKHLVKEMGELKVPQMKNEQKQLEERIETLKRNHNVALGRQRG
FEEEIVRFKKELRESQFRDAEEKYREMMIVMRTTELVNKDLDLYYKALDKAIMTFHSMKM
EEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRSYNYRVVMIKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQR
NFQLLVITHDEDFVELLGRSEYVETFYRIRKNIDQCSEIMKCSVNSLGSYVH
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagattgagaaaatgagtatcctcggagtgaggagttttggggtagaggacaag
gacaaacaaattatcactttctttaatccattaactattttggtgggaccaaatggtgca
gggaagacgactatcattgaatgtcttaaatatatctccactggcgactttcctcctggc
accaaaggaaactcatttgttcacgatccaaaggttgccaatgaaacagatgttagagct
cagattcgactgcagtttcgagatgtaaacggagagctcctagctgtccagcgatccatg
gtctgtacccagaaaggcaagaaaacagaatttaagacacttgaatccgtgattactaga
atgaagcatggcgagaaggtcagtctgagttccaagtgtgcagagatcgaccgagagatg
atcagcgccctcggtgtgtccaaatcggtgattaacaatgtcattttctgccaccaagaa
gaatccaactggccgttgagtgaagggaaggccctgaaacaaaaattcgatgagatcttt
tcagcaacaaggtacattaaagcactcgaaactctccgtcaggtacgaatgaaacaaggc
ttgaaagtaaaggagtgtcagaccgaactgaaatacctaaaacagaacaaagaaaaggcc
caggaaatccaggagcagctcagcaacagagaggctcagctggctgcttcgaaggagaat
gtgaaaactattgagagtcaactcgagcctctaaagagttctctggcagcagtcgaacag
aacctcatcaaagtggtgaggctggagagcgaaatcaaaacgcaggagagcaggaggcgg
cagatggagaaggataaccaagacttgcaacagaagatggaaaaggtttttcaaggaaca
gatgaacaactaagggacaggtaccagaaccaccagaggacagtgaaggagaaggaggcg
agattattggactgtaagcgggaattggacagagccactaaagagtgccagagatttaac
agtgagaagtcagagctgctgatggaacaaggtcgtcttcagcagcaggcagatcgccac
caggaacacatcgcattgagggattcactaattcaggctttggcggcacagctggaattc
gatggttttgagcgaacaccttttagtgaaaggcacgttaccaattttcacaccttgttg
aagaagaggcaggaaaaagatgcagaagtggcagatcatttgatgagagaatttgctcga
aaagaggcaatgaaacaaaggcagatagatgaaataagagacaagaaaactggattagaa
agaaccattgacctgaaatcagacattcaaaataagaagcaagttgagctgaagaatgtc
aaacgtgaattgcagcagctggaggggttttcagaccggattctggagctggatcgggag
attgccaagacggaacatgagctggagaaggctgagaggagcagcaatgtggaaacgctg
gaacgggaaataggaactctgcaaaacgagaaaataaacctggacaaagttctcagggag
ctggatcaggagatgaagcagctgaatctacataccacgaccatcacccaaatggaaatg
ctaacgaaagacaaagcagacaaggaggagcagatcaggaaagtaaaatcacgacattct
gatgaactgacatcgctgctgggatacttcccgaacaaaaaacaactcgaagactggctt
catggtaaaaatagagagattaatcagacaagggataatcttgctgcccttaacaagcgc
ctggcatcggtagagtacgataaaagttacgccattgacgagctcagaaaaaaagaagcg
cagttgtcccatcacgaagcgcagatcttcgatgtttgtggaagccaagatttcgacagc
gatctgaacaagcttcaagatgaaattgaaaaaagctcaaagcagcgagctgtgcttgcc
ggagccactgccgtttactcacagttcgttacgcagctgacggaggggaaccagtcatgc
tgtcccgtgtgtcaaagagagtttcagacggaggccgagctgcaggatgtcatcagcgac
ctgcagtccaagctgcgtctcgctccggacaaactgaaatcaacggagtctgagcttaaa
agaaaagagaaaagacgtgatgaaatgatgagtctcaagccacttaggcaaactgtagct
gagctcctggataaggacataccagccttgaggaacaagattcagcatgcaaacagggat
ttaacaaccctgaagggtgagatagaagaacaggaattactcttgcggacagctttgact
gaggtggacggtgccaaggaatgtctgcaggatataacactcatggaaaggtaccagact
gatattagggatgttgaacgaaaaattgctcagcaggagtctaagctggtaggggtcaaa
ttaagcagaacagttctacaagtgagccatgaaaaagaagagaagaagcacttgtgggat
acagtcactagtaaaattgagttaaatcaaaagctcaagcaagaccagcaaaatcagatt
cagcagctgaagagtacggtgaacgagcttaaagcagagaaactgcagatttccagcagc
atgcagcgtcgtcggcagctggaggagcaaacagtggagttaaccactgaggtccagtcc
ttgtgcagagagatcaaggaagcaaaagaacaggtatttcctttggatgcaactttagaa
aagctgcagcaggagaaggaggatctagtgaataaaaggactgcaagtaacaaggaagca
caagagaagataagtggcataaaagagaaagttaaggatatcaacaagtacgtgaaagaa
attgaaaactacattcaacaaagaaaagacgactacaaaaagcaaaaggagtctgagctg
gatgaagtaaattctcagttagctgcctatgagaaacagaaggaaaagataagtaaggag
atggaaacgattcgacaggatattgacactcagaagatacaggagaggtggctggaggat
aatctcactttgaggaaacggaacgaagagctaaaaggagttgaagacaacataaaacac
cttgtgaaggagatgggagaactgaaagtcccgcagatgaagaatgaacagaaacaactg
gaggagagaatagaaactctgaaaagaaaccataatgttgcccttggccgacagcgtggc
ttcgaggaagagattgttcggtttaaaaaggaacttcgagagtcccaattcagagatgca
gaggaaaagtacagggagatgatgattgtcatgagaacaaccgagctggtgaacaaggat
ctggacctttattacaaggctcttgataaagcaataatgacatttcatagcatgaagatg
gaagaaatcaacaaaataattcgtgacctttggcgaagcacctacagaggacaagatatt
gaatatatagaaatccgttctgatgcggatgagaatgtctcagcctccgataagcgaaga
agttacaactacagagtagtaatgatcaagggagataccgcgctggatatgcgaggaaga
tgcagtgctgggcaaaaggtacttgcttctctcatcatccgtcttgctctggcagaaacg
ttctgtctcaactgtggcatattggcactggatgagcccaccaccaacctcgatcgagaa
aacatagagtctctcgcgcatgcgctggtcgagataataaaaagccgctcacaacagcgt
aactttcagctgctggtgataactcacgatgaagattttgtggaacttctgggccgttct
gaatacgtggaaacattctacaggataaggaagaacattgaccagtgctctgagatcatg
aaatgcagcgtcaactccctgggctcgtacgtccattag
DBGET
integrated database retrieval system
