Buceros rhinoceros silvestris (rhinoceros hornbill): 104490006
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Entry
104490006 CDS
T08612
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
brhi
Buceros rhinoceros silvestris (rhinoceros hornbill)
Pathway
brhi03030
DNA replication
brhi03420
Nucleotide excision repair
brhi03430
Mismatch repair
brhi03440
Homologous recombination
brhi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
brhi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104490006 (RPA1)
03420 Nucleotide excision repair
104490006 (RPA1)
03430 Mismatch repair
104490006 (RPA1)
03440 Homologous recombination
104490006 (RPA1)
03460 Fanconi anemia pathway
104490006 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
brhi03000
]
104490006 (RPA1)
03032 DNA replication proteins [BR:
brhi03032
]
104490006 (RPA1)
03400 DNA repair and recombination proteins [BR:
brhi03400
]
104490006 (RPA1)
Transcription factors [BR:
brhi03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
104490006 (RPA1)
DNA replication proteins [BR:
brhi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
104490006 (RPA1)
DNA repair and recombination proteins [BR:
brhi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
104490006 (RPA1)
MMR (mismatch excision repair)
104490006 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
104490006 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
RADX
DUF4939
CATSPERD-E_C
IBR
Motif
Other DBs
NCBI-GeneID:
104490006
NCBI-ProteinID:
XP_010130534
LinkDB
All DBs
Position
Unknown
AA seq
603 aa
AA seq
DB search
AIMQGENIVKPVLQVINTRAIATGNGPPRYRVLMSDGVNTLSSFMLATQLNSLVEEERLS
AQCICQVNRFIVNSLKDGRRVVILMDLDVLKTADQVGGNIGNPVPYNEGEWQQRSSAPAA
NPAPSKPQQQNGNLSVAGPAAPKYHAPSNQFGKASAPSSLKTPGGSQAKVVPIASLNPYQ
SKWTICARVTQKGQIRTWSNSRGEGKLFSIELVDESGEIRATAFNDQADKFFPLIELNKV
YYFTKGTLKTANKQYTAVKNDYEITFTNETSVTPCDDAQHLPSVQFDFVSISNLENTPKD
SIVDVIGICKSYEDVTKIVVKASNREVSKRNVHLMDTSGKLVTATLWGNEAEQFDGSRQP
VVAIKGARVSDFGGRSLSVLSSSTVVINPDSPEAFKLRGWFDSEGQLLEGASISDVRGGP
ASGVNTNWKTLFEVKAENLGQGDKADYFSCVGTIVHLRKENCMYQACPSQDCNKKVIDQQ
NGLYRCEKCDREFPSFKYRMMLLVTIADCLDYQWVTCFQESAEFILGQNAAFLGELKEKN
EQAFEEVFQNANFNTYEFRIRVKLETYNDESRIKATAVDIKPVNYREYSKRLIASIRRNA
QLG
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
gccataatgcagggggagaacatcgtcaagcccgtgctgcaagtcatcaatacacgggct
attgctacaggaaatgggccacctcgttaccgagtgctgatgagcgatggggttaacacg
ctgtcctcgttcatgttggccacgcagctgaactctctggtggaagaggaacgcttgtca
gcgcagtgcatttgccaggttaacaggttcattgtcaacagcctgaaagatggcaggaga
gtggttatcctgatggacttagatgttctgaaaactgctgaccaggttggtgggaatatt
ggcaatccggtgccgtacaacgaaggtgagtggcagcaacgttcctcagctccagcagca
aacccagcacccagcaaaccacagcagcaaaacggcaatttgtcggtagctggtcctgct
gctccgaagtaccatgctccctcaaaccagtttggtaaagccagtgctcccagctcgctg
aagacgcccggaggatcgcaggccaaagtggtgccgattgccagcttgaacccgtaccag
tcgaagtggaccatttgtgctcgtgtgacccaaaaaggccagatccgcacgtggagcaac
tcccgtggtgaaggaaagctcttctctatagagctggttgatgaaagcggcgagattaga
gctactgctttcaatgatcaagcagacaagttctttcccctcattgaattgaacaaggtg
tattatttcaccaaaggcactctgaagactgctaacaagcagtatacagctgtgaagaac
gactatgagattacattcactaacgagacctcggtcacgccctgtgatgatgcccagcat
cttccatctgttcagtttgactttgtatccatctccaacttggagaacacacccaaagac
tcaattgttgatgtaattggaatttgtaagagctatgaagatgtcactaaaattgtagtg
aaagctagcaacagggaggtatcgaagaggaacgtgcatctgatggatacatcagggaaa
ctggtgacagctacgctgtggggaaatgaggctgaacagtttgacggttctagacaacct
gtggtagccatcaaaggagcccgagtctctgattttggtggcagaagcctgtctgtcctg
tcctcaagtacagttgtcatcaaccctgatagcccagaggcttttaagctccgaggatgg
tttgactccgaggggcagctcctggaaggtgcctccatctctgatgtgaggggcgggcca
gcgtctggagtgaataccaactggaaaactttgttcgaagtcaaagctgagaacttggga
caaggagataaggcagattattttagctgtgtgggcacaatcgtacatctgcgcaaggag
aactgtatgtaccaggcatgtccctctcaggattgcaataagaaagtgatagaccaacaa
aacggactgtatcgttgtgaaaagtgcgaccgcgaattccccagcttcaagtaccgcatg
atgctgctggtgaccattgcagactgtctggattatcagtgggtgacttgtttccaagag
tcagcagaattcattctcgggcaaaacgcagctttcctgggagaactgaaggaaaagaac
gagcaggcctttgaggaagtgttccaaaatgcaaacttcaacacctacgagttcaggatc
cgagtcaagctggagacttacaacgatgagtctcgtattaaggctacagcggtggacatc
aagcctgtgaactacagagaatacagcaagaggctgatcgcgagcatcaggagaaacgct
cagctggggtga
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integrated database retrieval system
