Buceros rhinoceros silvestris (rhinoceros hornbill): 104490710
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Entry
104490710 CDS
T08612
Symbol
PRPF4
Name
(RefSeq) LOW QUALITY PROTEIN: U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
brhi
Buceros rhinoceros silvestris (rhinoceros hornbill)
Pathway
brhi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
brhi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104490710 (PRPF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
brhi03041
]
104490710 (PRPF4)
Spliceosome [BR:
brhi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
104490710 (PRPF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_THOC3
WD40
WD40_CDC20-Fz
WD40_Gbeta
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
PRP4
Beta-prop_WDR36-Utp21_1st
WDR90_beta-prop_4th
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_Aladin
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_WDR41
Beta-prop_Vps41
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
WD40_like
Beta-prop_EIPR1
WD_LRWD1
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
104490710
NCBI-ProteinID:
XP_010131340
LinkDB
All DBs
Position
Unknown
AA seq
512 aa
AA seq
DB search
ATKSKPAEESDAPAAKRAPIFYGSLEEKEREGLRLAKGEAGLLGKEGMKAALEAGNINIS
SGEVFDLEDHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPXE
RRERLRNILSVVGTDALKKSRKDDDRSKKSREEYQQTWYHEGPRSLKTARVWLANYSLPR
AAKRLEEARLLKEIPEATRTSQRQELHKSLRSLNNFCSQIGDDRPLSYCHFSPNSKLLAT
ACWSGLCKLWSVPDCNLVHTLRGHSTNVGAIVFHPKATISVDKKDVNLASCAADGSVKLW
SLESDEPVADIEGHSMRVARVMWHPSGRFLGTTCYDHSWRLWDLEAQEEILHQEGHSKGV
YDIAFHTDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHVATGSGD
NTCKVWDLRQRKCIYTIPAHQNLVTGVKFERKDLLXXXAYDNTAKVWTHPGWSPLKTLAG
HEGKVMGLDISLDGQLIATCSYDRTFKLWTAE
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
gccaccaagagcaaaccggccgaggagagcgatgcgccagcggccaagagagcccccatc
ttctatggcagcctggaggagaaggagcgggagggcctgcgcctggcgaagggggaagcg
gggctgctggggaaggaagggatgaaagctgcgctggaggccggcaacatcaacatcagc
agcggcgaggtctttgatctcgaggaccacatcagcgagcggcaggcggaggtgctggcc
gagttcgagcgcaggaagagagcccggcagatcaacgtctccacggatgactcggaagtg
aaagcctgtctgcgggcgcttggggagcccatcacgctcttcggcgaaggccctngcgaa
cggagggagagattaaggaacatcctttcagtggtgggcactgacgcgttaaaaaagagc
aggaaggatgacgacaggtctaagaaatccagagaagagtatcagcaaacctggtaccac
gaaggaccacgcagtctgaagacagcgagggtgtggctggccaactactcgctccccagg
gcagcgaagcggcttgaagaagcgcggctgctcaaagagattccggaggcaaccaggaca
tcgcagaggcaagagctgcacaagtccctgcggtccttgaacaacttctgcagtcagatt
ggagacgatcgcccgctgtcctactgccacttcagccccaactccaaactcctcgctacg
gcctgctggagtggattgtgcaagctctggtccgtgcctgactgcaaccttgtccacacc
ttacgaggacacagcaccaacgtgggagcaattgtcttccatcccaaagccaccatctcc
gtggacaagaaggacgttaacctggcctcgtgtgcggctgatgggtccgtcaagctctgg
agcctcgaaagcgatgaaccggtggcagatattgaaggccacagcatgagagtggctcgt
gtgatgtggcacccgtctgggaggttcctgggtactacctgctacgatcactcgtggcgc
ttgtgggacttggaagcacaagaagagattctccaccaggaggggcacagcaaaggggtc
tatgacatcgcctttcacacggacggttccctcgccgggaccggtggcctggatgctttt
ggccgggtgtgggacttgcgcacaggacgctgcatcatgttcctagaaggtcacctgaag
gagatctatgggattaacttctccccaaatgggtaccacgtcgcaaccggcagcggtgac
aacacctgcaaggtgtgggacctgcgccagaggaagtgcatctacaccattcctgcccac
cagaacctggtgactggggtgaagtttgaacgtaaggacctcctnnnnnnnnnngcgtac
gacaacaccgccaaggtctggacgcaccccggctggtcccctctgaaaacgctggctggc
cacgagggcaaggtgatggggctggacatctccctggacgggcagctgattgcgacctgc
tcctatgacagaaccttcaagctgtggacagcggagtag
DBGET
integrated database retrieval system
