Buceros rhinoceros silvestris (rhinoceros hornbill): 104490748
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Entry
104490748 CDS
T08612
Symbol
COL18A1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(XVIII) chain
KO
K06823
collagen type XVIII alpha
Organism
brhi
Buceros rhinoceros silvestris (rhinoceros hornbill)
Brite
KEGG Orthology (KO) [BR:
brhi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
brhi04147
]
104490748 (COL18A1)
00535 Proteoglycans [BR:
brhi00535
]
104490748 (COL18A1)
00536 Glycosaminoglycan binding proteins [BR:
brhi00536
]
104490748 (COL18A1)
Exosome [BR:
brhi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
104490748 (COL18A1)
Proteoglycans [BR:
brhi00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
104490748 (COL18A1)
Glycosaminoglycan binding proteins [BR:
brhi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104490748 (COL18A1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
Motif
Other DBs
NCBI-GeneID:
104490748
NCBI-ProteinID:
XP_010131379
LinkDB
All DBs
Position
Unknown
AA seq
1125 aa
AA seq
DB search
MAALNVVSLQGVIADLKLRGDPRAAERQCEEEEDDAEEVSGDFGSGAEGGHQPSGKDRGV
PGLVDAVPVTSPPVAVGSGPRSSGDSLQQAERTRAEATLRVSTGGTGPKGEKGEKGERGL
KGDSGTGGIMGTVSVKGEKGEKGELGVKGSAGFGYPGSKGQKGEPGDPGPPGTISRHVGG
SMVEQVTGPPGPPGKDGAPGRDGEPGDPGEDGKPGDMGPQGFPGTPGEPGLKGEKVSASV
GTFIDMEGSGFTGDLETLRGPQGPPGPPGPPGVPGLPGEPGRFGMNQTDLLGLPGLPGRD
GIPGLPGPAGPPGPPGRDGAAGQPGPKGERGDVGDFGLPGAPGPKGSKGETGPPGAPGET
GLAGLPGPMGPRGQPGPPGPPGPPGLGYEAGFGDMEGSGLPFTTGSHGTGVPGPPGAKGS
PGLPGLPGLKGDAGVPGVDGRPGLEGFPGPQGPKGDRGSPGEKGERGQDGVGLPGPPGPP
GPPGQALAVSSEDKSLVTLPGPEGRPGRAGFPGPVGPKGERGSAGPQGSPGLKGDKGEPG
VIISPDGTMVTAKVKGEKGEPGLRGPMGPSGPQGRTGVKGEIGFPGRPGRPGMNGMKGEK
GDPADVSSVLGLRGLPGPPGPPGPPGPPGSIVYDSSNAFSDSGHPALPAFPGFHQFPGQK
GEKGDVGAPGPPGRXPVPAGRGCAIPQGDKGDAGPKGEKGEPGSTPLYGPGVSGLPGPPG
PQGYPGLPGPKGDSIVGPPGPPGPQGPPGIGXEGRQGPPGPPGPPGPPSFPGPHRQAISI
PGPPGPPGPPGPPGTSGTSLGLRALPTYQAMLSAAHELPEGNLIFLSDRQELYVRLRGGF
RRVLLEEHTLIPSAALDNEVYDKLPSIQYAGPQPPLQPRGPLHPLRNHVPPTTARPWRGD
EVVANQHRLPKQPLLHHQHELLNGYXXXXXXDPAPLAAHVHQDFQPALHLVALNAPLSGG
MRGIRGADFQCFQQARQVGLAGTFRAFLSSRLQDLYSIVRRADRTAVPIVNLQDEVLFSN
WEALFTGSGAPLRAGARILSFDGRDVLRDAGWPQKSVWHGSDAKGRRLPESYCETWRTWR
TEDRAATGQASSLGSGKLLEQVASSCQHTFVVLCIENSFMTAAKK
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atggcagccctcaatgtggtttccttgcagggggtgattgctgatttgaagctgcgaggg
gacccacgggcggccgagcgccagtgtgaggaagaggaggatgatgctgaggaggtctca
ggcgattttggcagcggggcagaaggtggacaccagccctcagggaaagacaggggtgtc
ccagggctggtggatgccgtccccgtcacctctccccctgtggcagtgggcagcgggcca
aggagcagtggggactccctgcagcaagctgagaggaccagagcggaggcgacgctgagg
gtctccacgggaggcacgggccccaaaggtgaaaagggggagaagggtgaacgtggcctg
aaaggggactcagggactggtggcatcatggggacagtcagtgtcaagggtgaaaagggg
gagaaaggagaactgggcgttaagggcagcgctggatttggctaccctggctctaagggc
cagaaaggggaacctggtgaccctggcccccccgggacaatctcacggcacgttggcggc
tcaatggtggagcaggtcactggtcccccagggccgccggggaaggatggagcccctggc
agggatggcgagcctggtgatcctggagaggatggaaaacctggcgatatgggaccccag
gggttccctggaacaccaggggagcccggtctgaagggggagaaggtgagtgccagtgtg
gggaccttcattgacatggagggctctggcttcactggtgacctggagactctgcggggt
ccacaagggccgcctggtcccccggggccacctggcgtgcccggtttgccaggggagcca
ggacggtttgggatgaaccagacagacctgctgggactgccagggctgccaggcagggac
gggatccccggactcccggggccagcgggtcctccaggtcctcctggaagagacggggca
gctgggcagccgggacccaaaggagagcggggtgacgtgggcgactttggcctccctgga
gcaccgggacccaagggcagcaagggagaaacaggaccaccaggagccccgggagaaaca
ggcttagccggccttcctgggcccatgggaccccgcgggcagccagggccccccgggccc
ccgggccccccagggctgggctacgaggctggattcggtgacatggagggctcaggcctg
ccgttcaccaccggatcccacggcaccggagtgccaggaccgccaggggcaaagggcagc
cccggactgcctggcttgccaggactgaagggcgatgctggtgtgcccggcgtggatggc
cgccctggcctggagggcttccctggaccacagggacccaaaggtgacagaggcagcccc
ggcgagaagggtgagcgaggccaagatggtgtggggctgcccggcccccctggtccacct
ggtcccccgggacaggctcttgctgtctcaagcgaagacaagtctttggtgactttgcct
ggtccagagggcagaccgggtcgtgctggcttcccgggcccggtgggaccaaaaggagag
cggggctcagctggtccccagggctcgccggggttgaagggggacaaaggggagcccggc
gtcatcatcagccctgatgggaccatggtcactgcgaaggtgaaaggagaaaagggggaa
ccggggctgcggggaccaatgggaccctcgggccctcagggacgaacaggggtgaagggc
gagatcggctttccgggcagacctggacgtcctggcatgaacgggatgaagggcgagaag
ggtgaccctgcagatgtcagcagcgtgctgggcttacggggtctgccgggacccccaggg
cctccagggccccccgggccacctggcagcatagtctacgacagcagcaacgccttcagc
gactctggccatcccgcgctgccggccttccctggtttccaccagtttccaggacaaaag
ggagagaaaggcgatgttggagccccgggacccccaggtaggtgaccggtccccgcagga
agaggctgtgccatcccacagggtgacaagggggatgcaggtcccaagggtgagaagggc
gagccaggcagcaccccgctttatggtcctggtgtctctgggctgccagggcctccaggg
ccccagggctaccccgggctcccgggtcctaagggggacagtatcgttgggccaccgggg
cctcccggacctcagggccccccaggtatcggataagaagggaggcagggcccccctggc
cctcctggcccccctggtccaccctctttcccaggtccccacagacaagctatcagcatc
cctggaccccctggaccgccaggaccccctggacctccaggcaccagtggcacatccttg
gggctgcgtgccctgccaacctaccaggcgatgctgagcgccgcgcacgagctgcccgag
ggcaacctcatcttcctgagcgaccggcaagagctctacgtccgcctgcgtgggggcttc
cgacgcgtgctgctggaggagcacaccctgatccccagtgcggcactggacaatgaggtg
tatgacaagctgcccagcatccagtatgctggcccccagccccctctccagccccgagga
cccctgcatcctctacgcaaccacgtccccccgacgactgcccggccctggcgtggggac
gaggtggtggccaaccagcaccgcctgcccaaacaacccctgctccaccaccagcacgag
ctcctcaacggctacnnnnnnnnnnnnnnnncagatccagcccccttggctgcccacgtg
caccaggacttccagcctgcccttcacctggtggctctcaatgccccgctgagcgggggc
atgcgcggcatccggggtgctgatttccagtgcttccagcaagcccggcaggttggtctg
gctggcaccttccgcgccttcctctcctcgcggctgcaggacctctacagcatcgtgcgc
agagctgaccgcacagccgtgcccatcgtcaacctccaagacgaagtgctcttcagtaac
tgggaagcccttttcacgggcagcggggccccactgcgagctggagcacgcatcctctcc
ttcgatggcagggatgtcctgcgggatgcaggatggccacagaagagcgtttggcatggc
tcagatgccaagggccggcgcttgcccgagagctactgcgagacgtggcggacgtggcgg
acggaggatcgtgctgccaccggccaggcgtcctcgctgggctctggcaagctgctggag
caggtggccagcagctgccagcacacctttgtcgtcctctgcatcgagaacagcttcatg
accgctgccaaaaagtga
DBGET
integrated database retrieval system
