Buceros rhinoceros silvestris (rhinoceros hornbill): 104491923
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Entry
104491923 CDS
T08612
Symbol
CPSF6
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
brhi
Buceros rhinoceros silvestris (rhinoceros hornbill)
Pathway
brhi03015
mRNA surveillance pathway
brhi03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
brhi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104491923 (CPSF6)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
104491923 (CPSF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brhi03019
]
104491923 (CPSF6)
Messenger RNA biogenesis [BR:
brhi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
104491923 (CPSF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
104491923
NCBI-ProteinID:
XP_010132713
LinkDB
All DBs
Position
Unknown
AA seq
562 aa
AA seq
DB search
EAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDSLPPSVGDDVGKGAAPNVVYTYTGKR
IALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSKKL
MDLLPKRELHGQNPVVTPCNKQFLSQFEMQSRKTTQSGQMSGEGKAGPPGGSSRAAFPPS
NRGRGRFPGAIPGGDRFPGPAGPGGPPPPFPAGQTPPRPPLGPPGPPGPPGPPPPGQVLP
PPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPP
GPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPPANSGIPTSDSRGPPP
TDPYGRPPPYDRGDYGPPGRRFTGNNMPIREKLHIPFYGRHTKNNTQNSGREMDAARTPL
SEAEFEEIMNRNRAISSSAISRAVSDASAGDYGSAIETLVTAISLIKQSKVSADDRCKVL
ISSLQDCLHGIESKSYGSGSRRERSRERDHSRSREKSRRHKSRSRDRHDDYYRERSRERE
RHRDRDRDRDRERDREREYRHR
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
gaagctgagtatggtggacatgatcagattgatttatatgacgatgtaatttctccgtct
gcgaataatggagatgccccagaagaccgtgattacatggattctctcccaccatctgtt
ggggatgatgtaggtaaaggagctgcaccaaatgtggtctatacgtatactggaaaaaga
attgccttgtacatcggaaatcttacttggtggacaacagatgaagacttaactgaagca
gttcattcactgggagtaaatgatattttggagataaaattttttgaaaatcgtgctaat
ggccagtctaaagggtttgccctggtgggtgtgggatcagaagcatcctccaaaaagttg
atggatttattgcctaaaagagaattgcatgggcagaatcctgttgtgactccatgtaat
aaacaattcctgagtcagtttgaaatgcagtcaaggaaaaccacacagtctggccaaatg
tctggcgaaggtaaagccggtcccccaggaggaagctcaagagctgcatttccacctagt
aatagagggcgaggtcgttttccaggtgccattccaggtggagacaggttccctggtcca
gcagggccaggaggaccaccaccacctttcccagctggacagactcccccacgtccacct
ttaggtcctcctggcccaccaggcccaccaggccctccacctcctggtcaggtcctccca
cctccattagctggacctcctaatcgtggtgaccgtccaccaccaccagttctgtttcca
ggacagccttttggtcagcctccgcttgggccacttcctccaggccctccaccaccagtt
ccaggctatgggccaccaccaggtccaccaccacctcagcagggtccacctcctcctcca
ggtccatttccccctcgtccacctggccctcttgggccacccctgactcttgctcctcct
ccacatctccctgggccacctccaggtgctccaccacctgcaccacatgtgaatccagct
tttttccccccacctgccaatagtggcatacctacttcagatagccgtggcccacctccg
acagatccatatggccgacctccaccatatgacagaggtgactatgggccacctggaagg
cgtttcactggaaataacatgcccataagagaaaaattacatattccattctatgggagg
cacacgaaaaataatactcaaaactcagggagagaaatggatgctgcaaggacacctcta
agtgaagcagaatttgaagaaatcatgaatagaaatagggcgatctcaagcagtgccatt
tcgagagctgtatcagatgccagtgctggggactatggaagtgctatagagaccttggta
actgcaatttccttaattaaacagtccaaagtatctgcggatgatcgctgtaaagtgctt
attagctctcttcaggactgccttcatggaattgagtccaagtcttatggttctggatcc
agacgtgagcgatccagagagagggaccacagtaggtcacgagaaaaaagtaggcgccac
aaatcacgtagtagagatcgtcacgatgactattatcgggaaagaagccgtgaaagagag
aggcatcgtgatcgcgacagagatcgcgacagagaaagagatagagagagagaatatcgt
catcgttaa
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