Buceros rhinoceros silvestris (rhinoceros hornbill): 104492523
Help
Entry
104492523 CDS
T08612
Symbol
PABPC1L
Name
(RefSeq) polyadenylate-binding protein 1-like
KO
K13126
polyadenylate-binding protein
Organism
brhi
Buceros rhinoceros silvestris (rhinoceros hornbill)
Pathway
brhi03015
mRNA surveillance pathway
brhi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
brhi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104492523 (PABPC1L)
09123 Folding, sorting and degradation
03018 RNA degradation
104492523 (PABPC1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brhi03019
]
104492523 (PABPC1L)
03041 Spliceosome [BR:
brhi03041
]
104492523 (PABPC1L)
Messenger RNA biogenesis [BR:
brhi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
104492523 (PABPC1L)
mRNA cycle factors
Stress granule specific factors
104492523 (PABPC1L)
Spliceosome [BR:
brhi03041
]
Complex C
Other components
Complex C specific factors
104492523 (PABPC1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RBD_DEAH11
RRM_occluded
RRM_RdRP1_2
RRM_3
ATP-grasp_2
DUF6262
Motif
Other DBs
NCBI-GeneID:
104492523
NCBI-ProteinID:
XP_010133397
LinkDB
All DBs
Position
Unknown
AA seq
630 aa
AA seq
DB search
MNASGSGYPLASLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDVATRRSLGYAYINFQ
QPVDAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGNIFIKNLDNSIDNKALYDTFS
AFGNILSCKVVCDENGSRGYGFVHFETHEAATRAIETMNGMLLNDQKVFVGHFKSRKERE
AEFGARAMEFTNVYIKNFGDDMDDDRLREIFSKFGKTLSVKVMMDNTGRSKGFGFVNFEK
HEEAQKAVADMNGKEINGRMVYVGRAQKRLERQSELKRKFEQIKQERVSRYQGVNLYVKN
LDDGIDDEKLRKEFSPYGTITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVST
KPLYVALAQRKEERKAILANQYMQRLATMRALPGPLLGSFQPPPGYFLPPIPQPQTRTTF
YSPSPVVPVRPATRWSAQLSCPPCESPSTPILRAATPPRRLLTGISTMRQASTQVPRVSP
QARRVANIGTQTVSTRVPSSPALPRGAPQYKYSWAVRNIQPMGHMPPLVGEPAVHVQGQE
PLTASMLAAAPPQEQKRMIGERLYPLIHAMHPSLAGKITGMLLEIDNSELLLLLESPDSL
HAKIEEAVAVLQAHQATETSHKSSAAAFLQ
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctagcggttctggctatccattggcctctctctatgtgggagacctccacccg
gacgtgaccgaagccatgctctatgagaagttctcgcctgctgggcccatcatgtccatc
cgagtctgccgggatgttgccacacgccgatcgctgggctatgcctacataaacttccag
cagcctgtagatgctgagcgagccctggacaccatgaactttgaagtgatcaaaggccgt
cccatccgcatcatgtggtcccagcgggaccctgggctccggaagtcgggggtcggaaac
atctttatcaagaacctggacaactccattgataacaaagccctgtatgacactttctcc
gcctttggaaacatcttgtcgtgcaaggtggtttgtgacgaaaacggatcccggggctat
ggctttgttcactttgagactcacgaggcagcaactcgggccatcgagaccatgaatggg
atgttgctcaacgaccagaaggtgtttgttggccatttcaaatcccgcaaagagcgcgag
gctgagtttggggctagggcaatggagttcaccaacgtatacatcaaaaactttggggat
gacatggatgatgacagactgagggaaatattctccaagtttggaaagacgctaagtgtc
aaagtcatgatggacaacactggccgctcgaagggctttggctttgtcaacttcgagaag
cacgaagaagcccagaaggcggtggctgacatgaacgggaaggagatcaacgggcggatg
gtgtacgtgggccgagcccagaagcggctggagcgccagagtgagctgaagcggaaattt
gagcagatcaaacaggagcgagtgagcagataccagggggttaacttgtatgtgaagaac
ctggatgatgggatagacgacgagaagctcaggaaggagttctctccctacggcaccatc
accagtgccaaggtgatgacggagggtggccacagcaaagggtttggctttgtatgtttt
tcctccccagaagaggctaccaaagccgtgacggaaatgaatgggcggatcgtcagcact
aagcctctctacgttgcacttgctcagaggaaagaggagcggaaagcaatccttgccaac
cagtacatgcagagattagccaccatgagggccctgcctggccctctcttgggctccttc
cagccccccccagggtacttcctaccccccatcccccagccacaaaccagaactaccttc
tacagccccagcccagttgtcccagtccgtcctgccactcgctggagtgcgcagctctcc
tgtcctccttgtgagtcaccctctacacccatcctgagggctgccacaccgccccggcgc
ctgctaaccggcatcagcaccatgagacaggcctccacccaggtgccccgtgtgtccccc
caggcccggagagtggccaacatcgggacacagacggtcagcacccgagtgccctcctcg
cccgccctgccacggggtgctccgcagtacaagtactcctgggctgtccggaacatccag
ccgatggggcatatgccgcccctggtgggagaacccgctgtacatgtccaggggcaggag
ccgctgacagcatccatgcttgcagcagcccctcctcaggagcagaagcgcatgataggt
gagcgcctttaccctctgatccatgcaatgcatccctcgctggcgggcaagatcactggg
atgctgctggagatagacaactctgagctgctgctgctcctggagtcccctgactccctg
cacgccaagatcgaggaagcggttgctgttctccaagcacaccaggccaccgagacgtcg
cacaagagcagtgccgcggcgttcctgcagtga
DBGET
integrated database retrieval system
