Buceros rhinoceros silvestris (rhinoceros hornbill): 104492667
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Entry
104492667 CDS
T08612
Symbol
CPSF2
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
brhi
Buceros rhinoceros silvestris (rhinoceros hornbill)
Pathway
brhi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
brhi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104492667 (CPSF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brhi03019
]
104492667 (CPSF2)
Messenger RNA biogenesis [BR:
brhi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
104492667 (CPSF2)
U7-dependent histone pre-mRNA processing factors
104492667 (CPSF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
104492667
NCBI-ProteinID:
XP_010133552
UniProt:
A0A091H2Z2
LinkDB
All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDENFSMDIIDSLRKHVHQVDAVLL
SHPDPLHLGALPYAVGKMGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVD
AAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR
EIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTA
GRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN
NPFQFRHLSLCHSLSDLARVPSPKVVLASQPDLECGFSRDLFIQWCQDSKNSVILTYRTT
PGTLARFLIDNPSEKVIDIELRKRVKLEGKELEEYLEKEKLKKEAAKKLEQSKEADIDSS
DESDAEEDIDQPTVHKTKHDLMMKGEGSRKGSFFKQAKKSYPMFPAPEERIKWDEYGEII
KPEDFLVPELQATEEEKSKLESGLTNGEEPMDQDLSDVPTKCISATESMEIKARVTYIDY
EGRSDGDSIKKIINQMKPRQLIIVHGPPEASQDLAECCRAFGGKDIKVYMPKLHETVDAT
SETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSKVDTGVILEEGELREDEDLE
MQVDMPSSDSSVIAQQKAMKSLFGDDDKEMCEESEIIPTLEPLPPHEVLGHQSVFMNEPR
LSDFKQVLLREGIQAEFVGGVLVCNNLVAVRRTETGRIGLEGCLCQDFYRIRDLLYEQYA
IV
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgacatcgattatcaagttgactactctttcaggggtgcaggaggagtctgccctttgc
tatctattgcaagtagatgaatttcgttttcttttggactgtggctgggatgaaaacttt
tctatggatattattgattctctgaggaaacatgtacaccaggttgatgctgttcttctt
tctcatcccgaccctctacaccttggtgctcttccatatgcagttggaaaaatggggttg
aattgtgccatttacgcaactattcctgtgtataaaatgggacagatgttcatgtatgat
ctctaccagtcccgccataataccgaagatttcacactctttacactggatgacgtggat
gcagcctttgataagatacaacagctgaagttttctcagattgtgaacttgaaaggcaaa
ggacatggtttgtcaatcacaccattgccagctggccacatgataggaggcacaatttgg
aagatagtcaaggatggagaggaagaaattgtttatgcagttgatttcaaccacaagagg
gagatccatctgaatggatgttccttggaaatgttgagcaggccttcattgcttattaca
gattcatttaatgctacttatgtacaacccaggaggaaacaaagggatgagcagctactg
actaatgttttggagacattacgaggtgatggaaacgtattaatagctgtggatacagca
ggcagagttctggaacttgctcaacttcttgatcagatctggagaacgaaagatgcagga
ttaggagtctactctctagcacttttgaataacgtcagctacaatgtagtggagttctct
aagtcacaggttgaatggatgagtgacaagttgatgaggtgctttgaagataagagaaat
aatccttttcagttccgccatctctccttatgtcatagtctgtctgatttggctcgagtg
cctagtccaaaagttgttcttgccagtcaacctgacttagagtgtggattttctagagat
cttttcattcagtggtgccaggattccaaaaactctgtaattttaacttaccgcactaca
cctggaacattagcacgattcctgattgataatccttcagaaaaagttatagatattgag
ctgagaaaacgtgtcaagttggaaggaaaagaacttgaagaatacctagaaaaggagaaa
ctaaagaaagaagcagctaagaagttagaacagtctaaagaggcagatattgattccagt
gatgagagtgatgctgaagaggatattgatcagccaactgtacataagaccaaacacgat
ttgatgatgaaaggtgaaggtagccggaaaggaagcttcttcaaacaggcaaagaaatct
tacccaatgtttccagcccctgaagaaagaattaaatgggatgaatatggcgagattatc
aaacctgaggattttctagttccagaacttcaagcaacagaagaagaaaaaagcaaatta
gaatctggtttgacaaatggagaagagcctatggaccaggatttatcagatgttcctaca
aaatgcatttctgcaacagaatccatggaaattaaagccagagttacatacattgactat
gaaggacgctcagatggggactcaattaaaaaaattattaaccaaatgaaaccaagacaa
ctgatcattgtccatggaccacctgaggccagtcaggaccttgcagagtgttgcagagct
tttggtggaaaagatattaaagtttacatgccaaaactgcatgaaactgtagatgcaacc
agcgaaactcacatttaccaggtcaggttaaaagattctcttgtcagctcccttcagttc
tgtaaagccaaggatgctgagctggcttggatagatggtgttctggatatgcgggtttca
aaagtggatactggagttattttggaagagggagagctgagggaagatgaagacttagag
atgcaagtagatatgccttcttcagactctagtgtcattgcacaacagaaggccatgaaa
agcctctttggtgatgatgacaaggagatgtgtgaggagagtgagatcattcctactttg
gaacccttgccacctcatgaggttcttggacatcagtctgtgtttatgaatgagccaaga
ctctctgacttcaagcaagttctcttgcgagaaggtatacaagctgaatttgtcggagga
gtgcttgtgtgcaacaatctggtggctgttcgcaggactgaaacggggcgcattggactg
gaaggctgtctctgtcaggacttctataggataagagaccttttatacgagcaatacgct
attgtctaa
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