Buceros rhinoceros silvestris (rhinoceros hornbill): 104492938
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Entry
104492938 CDS
T08612
Symbol
PRPF8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
brhi
Buceros rhinoceros silvestris (rhinoceros hornbill)
Pathway
brhi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
brhi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104492938 (PRPF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
brhi03041
]
104492938 (PRPF8)
Spliceosome [BR:
brhi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
104492938 (PRPF8)
Complex C
U5 SnRNP specific factors
104492938 (PRPF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
104492938
NCBI-ProteinID:
XP_010133884
LinkDB
All DBs
Position
Unknown
AA seq
2321 aa
AA seq
DB search
PSPLAPLPDYMSEEKLQEKARKWQQLQAQRYAEKRKFGFVDAQKEDMPPEHVRKIIRDHG
DMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLYHITGAISFVNEIPW
VIEPVYIAQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNILDVEPLEAIQLE
LDPEEDAPVLDWFYDHQPLKDNRKYVNGSTYQRWQFTLPMMSTLYRLANQLLTDLVDDNY
FYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDINKIIIRQPIRTEYKI
AFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPISHRHSVKSQEPLPDD
DEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRRALDIPLVKNWYREH
CPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATKFFQSTKLDWVEVGL
QVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREVLRLT
KLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMRQIRMCKDLKHLIYY
RFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLARQFEGRHSKGVAKTVTK
QRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPTP
IENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLTRLYLKAEQERQHNY
LKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLILALERLKEAYSVKS
RLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMDLYSHLVPVYDVEPL
EKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGINNLQDVWETSEGECN
VMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYKDMNHTNSYGIIRGL
QFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATEVAHPIRLFCRYIDR
IHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVF
WDIKNRLPRSVTTVQWENRLVSVYSKDNPNLLFNMCGFECRILPKCRTSYEEFTHKDGVW
NLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYF
REAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVL
IPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQ
EAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPFW
WTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMK
WKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLI
QIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSYKMNSSCADILLFAS
YKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYARAKFLDYTTDNMSI
YPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPALYVLRERIRKGLQLY
SSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRT
GQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEV
HLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTAFS
RLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVEVQLKDLILADYGKK
NNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLTATQTRTVNKHGDEI
ITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKETGYTYILPKNVLKKF
ICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLPGQLPQHEYLQEMEP
LGWIHTQPNESPQLSPQDVTTHAKVMADNPSWDGEKTIIITCSFTPGSCTLTAYKLTPSG
YEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQGSWNYNFMGVRHDPNMKY
ELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA
NT seq
6966 nt
NT seq
+upstream
nt +downstream
nt
cccagcccgctggcgccgctgcccgactacatgtctgaggagaagctgcaggagaaagcc
cgcaagtggcagcagctgcaggcccagcgctatgcggagaagaggaaattcggcttcgtg
gacgcgcagaaggaggacatgccccccgagcacgtccggaagatcatccgcgaccacggt
gacatgaccaacaggaagttccgtcacgacaagcgcgtttacctgggtgctctgaagtac
atgcctcatgctgttctgaagctcttggagaacatgcccatgccctgggagcaaatcaga
gatgttccagtcttgtaccacatcaccggcgccatctcttttgtgaatgagatcccctgg
gtcatcgagccggtgtacattgctcagtgggggtcgatgtggattatgatgaggcgagag
aagagggataggcgtcacttcaagaggatgagattccccccgtttgatgacgaagaaccc
cctctggattatgctgataacatcctggatgtggagcccctggaagcgatccagctggag
ctggatccagaggaggacgcccctgtgctggactggttctatgaccaccagccgctgaag
gacaacaggaagtacgtgaacggttcgacgtaccagcgctggcagttcaccctcccgatg
atgtccacgctgtaccggctggctaatcagctgctcactgacctggtggatgacaactat
ttctatctgttcgacctgaaagcgttctttacctccaaggcgctgaacatggccattcct
gggggtcccaagtttgagcctctggttagagacatcaatcttcaggatgaagactggaat
gaatttaatgacatcaacaagattatcatcaggcagccaatcaggacagagtacaaaatc
gcttttccctacttgtacaataacctgccacaccatgtccacctgacctggtatcacact
ccaaacgtcgttttcattaaaacagaagatcctgatctcccggctttttacttcgatccg
ctgatcaaccccatttcacacagacattctgtcaagagtcaggaaccgttgcctgatgat
gacgaagagtttgagttgccagagtttgtggaacctttcctgaaggacaccccactctac
acagataacacagccaacggtattgccctcctgtgggccccacggcccttcaacttgagg
tctgggaggactcggagagctcttgatatcccactggtcaagaactggtatcgtgagcac
tgcccagccggccagccggtgaaagtgcgggtctcctatcagaagctactgaaatactat
gtcctcaacgcgctcaagcacagaccccccaaggctcagaagaagagatacctgttccgc
tccttcaaagctacgaagttcttccagtcgacaaagctggactgggtggaagtgggcctg
caggtgtgtcgccagggctacaacatgctgaacttgctgatccacaggaagaacctgaac
taccttcacctggattacaacttcaacctgaagcccgtgaagaccctcaccacgaaggaa
agaaaaaaatctcgttttggtaatgctttccatctgtgccgagaggttctgcggctcacc
aagctggtggtggacagccacgtccagtacagacttggaaacgtggatgcatttcagctg
gcagatgggctgcagtacatcttcgcccacgtgggtcagctgacaggaatgtatcgatac
aagtacaaactgatgaggcagatccgtatgtgcaaggacctgaaacatctcatctactac
aggtttaacacggggcctgtgggcaaaggtcctggctgtggcttctgggctccaggctgg
agagtgtggctgttcttcatgaggggcatcacgccgctgttggaacgctggctggggaat
ctgctggccaggcagtttgaaggccgtcactccaagggtgtagcaaagaccgtcaccaag
cagcgtgtggagtctcactttgacctggagctgagggcagccgtgatgcatgacattctg
gacatgatgccggaaggaatcaaacagaacaaagccagaacgatcctgcagcacctgagc
gaggcttggcggtgctggaaggccaatatcccctggaaggtgccagggctgccaactcct
attgagaacatgatcctgaggtacgtgaaggctaaagctgactggtggacaaacacagct
cactacaacagggagcgcatccgtcggggtgccactgtagacaaaactgtctgtaagaag
aatctgggccgtctgaccagactctacttaaaagctgagcaggaacggcagcataattac
ttgaaggatgggccttacatcaccgcggaagaggctgtggctgtgtacacgaccacagtg
cactggctggagagcaggaggttctcgcccattcccttccctccgctgtcctacaagcat
gacaccaagttgctgatactagccctggagaggctgaaggaagcttacagtgtgaaatct
cgcctgaatcagtcgcagagagaggagttgggcttgatcgaacaggcctacgataatcct
cacgaagctctgtccagaatcaaacgacaccttttaactcagagagccttcaaggaggtg
ggtattgagttcatggatctctacagccacttagttcctgtttatgatgttgagcccttg
gagaaaatcacggatgcgtatctggatcagtacttgtggtacgaggccgataagcgaagg
ctcttccctccgtggatcaaacctgctgacactgaacctcctccactgttggtgtacaag
tggtgccagggcattaataatctgcaggacgtttgggaaaccagtgaaggtgaatgcaac
gtgatgctggagtctcgattcgagaagatgtatgagaagattgacctgacgttgctcaac
aggctgttgcgtcttatcgttgatcacaacattgctgactacatgacggccaagaacaac
gtggtgatcaactacaaggacatgaatcacacaaactcctacgggattattcgcgggctg
cagtttgcttccttcattgtccagtattatgggcttgtgatggacctgctggtgctgggt
ctgcaccgcgccagcgaaatggctgggcctccccagatgccaaatgatttcctcagcttc
caggacattgccactgaggtggcccatcccattcgcctcttctgcagatacattgaccgt
atccacatcttcttcagatttacagcagatgaggcaagagacttgattcagcgatacctg
acagagcatccagatcccaacaacgagaacatcgtgggctacaacaacaagaagtgctgg
ccccgggatgctcggatgcgcctcatgaaacatgatgtgaaccttggtcgtgctgtgttc
tgggatatcaagaaccgcctgcctcgatcagtcaccacagtgcagtgggagaaccgcctc
gtgtccgtttacagcaaggacaaccccaatctgctgtttaacatgtgtggcttcgagtgc
cgcatcttgcccaagtgccgtaccagctatgaggagttcacccacaaggatggtgtctgg
aacctgcagaacgaggtcaccaaggagcgcacagctcagtgcttcctgcgcgtggatgat
gagtctatgcagagattccacaacagagtgaggcagatcctcatggcgtctggctccacg
accttcacaaagattgtcaataaatggaacacggccctgattggcttgatgacgtatttc
cgggaagctgttgtgaatactcaagagttgctggacttgctggtgaagtgtgagaataaa
atccagactcgaatcaagatcggtctgaactccaaaatgcccagccgcttcccgccggtg
gtgttttacacccccaaggagctgggggggctgggcatgctctccatgggccacgttctc
atcccgcagtcagacctgaggtggtccaagcagaccgacgttggcatcactcacttccgc
tctggcatgagccacgaggaggaccagctcatcccaaatctgtaccgttacatccagcca
tgggagagcgagttcatcgactcgcagagggtgtgggcagagtatgccctgaagcgacaa
gaggccatcgcccagaacaggcgtctgacgctagaggatctggaggactcgtgggacagg
ggaattcctcgtattaacacccttttccagaaggaccggcatactcttgcttacgataaa
ggatggagagtcaggacagacttcaaacagtatcaggtcctgaagcagaacccgttctgg
tggacgcatcagcgccacgacggcaaactctggaacctgaataactaccgcaccgatatg
atccaggcacttggtggagtggaaggaatcctggagcacactctcttcaagggcacttac
ttccccacatgggagggtctcttctgggagaaggccagtggctttgaggagtccatgaag
tggaagaagctgacgaatgcccagagatcgggtttgaaccaaattccaaacagaaggttc
accctgtggtggtctccgaccattaacagagccaacgtatatgttgggtttcaggtgcag
ctggatttgacaggcatctttatgcacggcaagatccccacactgaagatttccctcatt
cagattttccgagctcacttgtggcaaaagatccacgagagcattgtcatggatttgtgt
caggtgtttgatcaagagctggatgccctggagattgagacagtgcagaaggagacgatc
catcccaggaagtcatacaagatgaattcctcatgtgcagatatccttctctttgcttcc
tacaagtggaatgtgtcacgtccatcactgctcgcagattccaaagatgtgatggacagc
accaccacgcagaagtactggatagacatccagctgcgctggggagattacgattcccat
gacatcgagcgctacgcgagagccaagttcctggactacactacagacaacatgagtatc
tacccgtcccccaccggggtgctcatcgccattgatctggcctataacctgcacagtgct
tatgggaactggttccccgggagcaaacctctgatccagcaggccatggccaagattatg
aaagcaaatcctgcactgtatgtgttgagagaacgaatccgcaagggcttgcagctgtac
tcgtcggagcccacagaaccgtacctgtcctcccagaactatggagagctcttctccaac
cagatcatctggtttgtggatgacaccaatgtctacagagtgaccattcacaagactttt
gaagggaatttaaccacaaagcccatcaatggagccattttcatcttcaatcccagaact
ggacagctcttcctgaagatcatccatacgtctgtgtgggcaggacagaagcgtctggga
cagctggccaagtggaagactgctgaagaagtggctgccttgattcggtctcttcccgtg
gaggagcagcccaagcagatcattgtgacgcggaagggcatgttggatccgctcgaggtg
cacttgctggatttccccaatatcgtgatcaagggctctgagctgcagctgcccttccag
gcctgtctgaaagtggagaagtttggtgacctcatcctgaaggctacagaaccccagatg
gttctcttcaacctctacgacgactggctgaaaaccatctcctcttacacggcgttctct
cgtctgattctgattctccgggcactgcatgtgaataacgatcgagccaaagttattctg
aaaccagacaagacaaccataacggagcctcaccacatctggccaaccctgacggacgag
gagtggatcaaggtggaggtgcagctgaaggatctcatccttgccgactacggcaagaag
aacaacgtgaacgtcgcatccctgacacagtcagagatccgagacattatcctgggcatg
gagatctctgccccctcgcagcagaggcagcagattgcagaaattgagaagcaaaccaag
gagcagtcgcagctgacagccacgcagacccgcaccgtgaacaaacacggcgatgaaatc
atcacctctacaaccagcaactacgaaacccagactttctcttccaagaccgagtggcga
gtcagagcgatttctgctgccaacctccacctccgaacgaaccacatctacgtttcatca
gacgacatcaaggaaacgggctacacgtacatcctgcccaagaacgtgttgaagaagttc
atctgcatctcggacctgcgggcccagatcgcaggttacctgtatggagtgagccctccc
gataacccccaggtgaaggagatccgctgcattgtgatggtgccccagtggggaacgcac
cagacggtgcatctcccggggcagctgccgcagcacgagtatctccaggaaatggaacct
ctgggctggatccacacccaaccaaacgagtcccctcagctctcgccacaggatgtcacc
acccatgccaaggtcatggctgacaacccctcctgggatggggagaagaccatcatcata
acctgcagttttacgccaggctcctgcacgctgacagcctacaaactgaccccgagcggc
tacgagtggggccggcagaacacggacaaggggaacaaccccaagggctacctgccctcc
cattacgagagggtgcagatgctgctgtcggatcgcttcctcggcttcttcatggtccca
gcgcaaggctcctggaactacaacttcatgggtgttcgccacgaccccaacatgaagtac
gagctgcagctcgccaaccccaaggagttttaccacgaggtccatcgcccttctcacttc
ctcaacttcgccctgctgcaggagggggaggtctactccgccgaccgggaggacctttac
gcctga
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integrated database retrieval system
