Buceros rhinoceros silvestris (rhinoceros hornbill): 104493438
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Entry
104493438 CDS
T08612
Symbol
POLE
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
brhi
Buceros rhinoceros silvestris (rhinoceros hornbill)
Pathway
brhi03030
DNA replication
brhi03410
Base excision repair
brhi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
brhi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104493438 (POLE)
03410 Base excision repair
104493438 (POLE)
03420 Nucleotide excision repair
104493438 (POLE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
brhi03032
]
104493438 (POLE)
03400 DNA repair and recombination proteins [BR:
brhi03400
]
104493438 (POLE)
Enzymes [BR:
brhi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
104493438 (POLE)
DNA replication proteins [BR:
brhi03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
104493438 (POLE)
DNA repair and recombination proteins [BR:
brhi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
104493438 (POLE)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
POL2_thumb
DNA_pol_B_exo1
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
Motif
Other DBs
NCBI-GeneID:
104493438
NCBI-ProteinID:
XP_010134413
LinkDB
All DBs
Position
Unknown
AA seq
1438 aa
AA seq
DB search
VDYYFIQEDGSRFKVALPYKPYFYIATQKGCEREVSSFLSKKFQGKIAKLETVPKEDLDL
PNHLVGLKRNYIRLAFNTVDDLVKVRKEISPAVRKNRERDQASDVYTALLSSALSGGSLS
TEEDGASRKVASQMDNIVDMREYDVPYHIRLSIDLKIHVAHWYNVRYRGSTYPPEITRRD
DLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMIDGQGYLITNREIVSEDIEDFE
FTPKPEYEGPFCVFNEPDEAHLIQRWFEHVQETKPTIIVTYNGDFFDWPFVEARAAAHGI
DMYQEIGFQKDSQGEYKASQCIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDP
EEMCRMATEEPQTLATYSVSDAVATYYMYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLC
EALLMVQAYHANIIFPNKQEQEFNKLTDDGHVLDSETYVGGHVEALESGVFRSDIPCRFK
MNPAAFDFLVQHVEKTLRHAIEEEEGLPLDQVTNFQEVCDEIKVKLNSLRDVPNRIECPL
IYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPGANCQRRMTWQWRGEFMPASRS
EYHRIQQQLESEKFPPLSPDGAPRAFHELSREEQAKYEKKRLADYCRKAYKKIHVTKVEE
RVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSAAVETGDASEVKRCKNMEILY
DSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGANIITQARELIEQIGRPLELDT
DGIWCVLPNSFPENFVIKSTNTKKPKVTISYPGAMLNILVKEGFTNDQYQELQDPASLTY
VTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEVKRRGELQL
VKIFQSSVFEAFLKGSTLEEVYASVAKVADYWLDVLYSKAANMPDSELFDLISENRSMSR
KLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRFIISKKPEGSPVTERAIPLAIFQA
EPSVRKHYLRKWLKSPSLQDFNIRAILDWDYYIERLGSTIQKIITIPAALQQVKNPVPRV
RHPDWLHKKLLEKNDVYKQKKINELFASEGKRQVLANQPPVGTPSSQISDIEDFGAAKTH
QPLVPIANKRKRVPVAEDSQQMSQDLELCQSWREILGPPPPLGTTKEERLVWLRYHQKKW
ELQARQRRERCKRRRLEDGGMTAGGGVVRDAASKGLSSYLRRTARSILDLPWQIVQIAET
SQPGLFRLWALIGSDLHCIKLSIPRVFYVNQRVPKPEEGVAYRKVNRILPRSNVVYNLYE
YSVPEDMYQEHINEINADLSAPDIEGVYETQVPLLLRALIQLGCVCMVSRQMVRHLAGRE
AETFDIEHLEMRSLAQFTYLEPGSIRHIYLYHCSQGSKALFGLFIPSQCKGAVFVLDK
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
gtggactactacttcatccaggaggatgggagccgcttcaaggtggccctgccctacaag
ccttacttctacatcgccacccagaagggctgcgagcgagaggtgtcctccttcctctcc
aagaagttccagggaaagattgcaaagctggagactgtccccaaagaagacttggacctg
ccaaaccacttggtgggcctgaagaggaactacatcaggctggccttcaacacggtggac
gacctggtgaaggtgcggaaggagatctctcccgccgtgaggaagaacagagagcgagac
caggcgagcgatgtctacacggccttgctgtcgagcgctctgagcggtggcagcctgagc
acggaggaggacggggcctccaggaaggtggccagccagatggacaacattgtggacatg
cgggagtacgacgtgccctaccacatccgcctctccatcgacctgaagatccacgtggct
cattggtacaacgtgcgataccggggcagcacctacccccccgaaatcacccgccgcgat
gacctcgtggagcggccggatcccgtcgttctcgccttcgacattgaaaccaccaaactt
cctctgaagtttcccgatgcagaaacagaccagatcatgatgatctcctacatgattgat
gggcagggctacctgatcacaaacagggagatcgtctctgaagatattgaggactttgag
tttactcccaagccggagtacgagggtccgttttgtgtcttcaatgaaccggacgaagcc
catttaatccagaggtggttcgaacacgtccaggagaccaaacctaccatcattgtcacg
tacaacggagacttctttgactggcccttcgtggaggcaagagcagcggctcatggcatt
gatatgtaccaggagattgggttccagaaggacagccaaggggagtacaaagcatcccag
tgcatccacatggactgtctgaggtgggtgaagagagacagttacctccctgttgggagt
cacaacctgaaagcagcagctaaagccaaactgggttacgatccggtggagctggaccct
gaagagatgtgccggatggccacggaggagcctcagaccctggccacctattcagtgtcc
gacgccgttgctacctattacatgtatatgaagtacgtgcatcccttcatcttcgccttg
tgcaccatcattcccatggagcccgacgaggtgttaagaaaaggatctgggacgctgtgc
gaggcgctgctgatggttcaggcctatcacgccaacatcatcttccccaacaagcaggag
caggaattcaacaagctgacagacgatggccacgtgctggactcggagacgtacgtggga
ggccacgtggaagcgctggaatctggagtctttcgcagtgacatcccctgccgcttcaaa
atgaatcctgcagcctttgacttcctggtgcagcacgtggagaagacgctgcggcacgcc
atcgaggaggaggagggtttacccttggatcaagtcaccaacttccaggaggtttgtgat
gaaattaaggtcaagctgaattctctgagggacgttccgaacagaatcgagtgtcccctt
atctaccatctagacgtgggggccatgtaccccaacatcattctgaccaacaggttgcag
ccctcagccatggtggatgaggccacatgcgctgcttgtgacttcaacaagccgggtgcc
aactgccagcgccggatgacctggcagtggagaggagagttcatgcccgccagccgcagc
gagtaccaccgcatccaacagcagctggagtcagagaagttccctcccctgtcccccgac
ggagcaccccgtgccttccacgagctctcccgggaagaacaggccaagtacgagaaaaag
cggctggcagattactgccgcaaggcctacaagaagatccacgtcaccaaggtggaggaa
cgggtcaccaccatctgccagcgcgagaactctttctacgtggacacggtgcgagctttc
cgggaccgccgctatgagttcaaggggctgcacaaggtgtggaaaaagaagctgtctgca
gcagtagagaccggagatgcctctgaagtgaagcgctgcaagaacatggaaatcctgtat
gactccctgcagctggcccacaagtgcatcctcaactccttctatggctacgtcatgcgg
aagggagctcgctggtactccatggaaatggccggcatcgtctgcttcacgggagcgaac
atcatcacccaggccagggagctgatcgagcagattgggagacctctggaactggatacc
gatgggatttggtgtgtcctccccaacagcttcccagagaactttgtcatcaagtcaacc
aacaccaagaagccgaaggtgacaatctcctacccgggtgccatgctgaacatcctggtg
aaggagggcttcaccaacgatcagtaccaggagctgcaggacccggcctctctcacctat
gtcacgcgctcggagaacagcatcttttttgaagtggatgggccatacctggccatgatc
ctcccagcgtccaaagaggagggcaagaagctgaagaaaaggtacgcggtgttcaacgag
gacgggtccctggccgagctgaagggctttgaggtgaagcgccggggagagctgcagctg
gtgaagatattccagtcttctgtgttcgaagcctttctgaaaggcagcaccctggaggag
gtgtacgcttccgtggccaaggtggcggattactggctggacgtgctctacagcaaggct
gccaacatgcctgattcagagctgtttgacctgatctcagagaaccgctccatgtcgcgc
aagctggaggactacggggagcagaagtccacctccatcagcactgccaagcgcctggca
gagttcctgggggaccagatggtgaaggatgcagggctgagctgccggttcatcatttcc
aagaaaccagaagggtctccagtcaccgagagggccatccccctcgccatcttccaagcc
gagcccagcgtgcgcaaacattacctccggaagtggctgaagagcccctcgctgcaggac
ttcaacatccgggcgatcctggactgggactactacatcgagagactgggcagcaccatc
cagaagatcatcaccatccccgcagccctgcagcaggtaaagaacccagtgccacgggtc
cgtcacccagactggctccacaagaagctgctggagaagaacgatgtgtacaagcagaag
aaaatcaatgagctcttcgcttcagaaggcaagagacaggtcctcgccaaccagccccca
gtggggacgcccagctcacagattagtgacatagaggactttggagctgccaagacccat
cagcccctggttcccattgcaaataagcggaagcgagtccctgtggcagaggacagccag
cagatgtcccaggacctggagctgtgccagtcctggcgagagatcctaggtccacccccg
cccctgggcaccaccaaggaggagcggctggtctggctgcgctaccaccagaagaagtgg
gagctgcaggctcggcagcggcgggagcggtgcaagaggcggcgtctggaggacggcggg
atgacagcaggaggaggggtggtccgcgatgccgcctccaaggggctgagcagctacctg
cgccggacggcccgcagcatcctggacctgccctggcagatcgtgcagattgccgagacc
agccagcccgggctcttccggctgtgggcgctgatcggcagcgacctgcactgcatcaag
ctgagcatcccccgggtcttctacgtcaaccagcgcgtcccaaagccggaggagggagta
gcctacaggaaggtgaacaggatcctgccccgctcaaacgtcgtttacaacctgtatgaa
tactcggtccctgaagacatgtaccaggagcacatcaatgagatcaacgcggacctctcc
gctccggacatcgagggtgtgtacgagacacaggtgccgctgctcctccgtgccctgatc
cagctgggctgcgtctgcatggtcagcaggcagatggtcaggcacctggcggggagagag
gccgaaaccttcgacattgagcacctggagatgcgctcgctggcccagttcacttacctg
gagccaggaagtattcgccacatctacctctaccactgctcccagggcagcaaggcactc
tttggcctcttcatcccctcgcagtgcaaaggtgccgtctttgtgctggacaag
DBGET
integrated database retrieval system
