Buceros rhinoceros silvestris (rhinoceros hornbill): 104493953
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Entry
104493953 CDS
T08612
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
brhi
Buceros rhinoceros silvestris (rhinoceros hornbill)
Pathway
brhi03030
DNA replication
brhi03410
Base excision repair
brhi03420
Nucleotide excision repair
brhi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
brhi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104493953 (RFC1)
03410 Base excision repair
104493953 (RFC1)
03420 Nucleotide excision repair
104493953 (RFC1)
03430 Mismatch repair
104493953 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
brhi03032
]
104493953 (RFC1)
03400 DNA repair and recombination proteins [BR:
brhi03400
]
104493953 (RFC1)
DNA replication proteins [BR:
brhi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
104493953 (RFC1)
DNA repair and recombination proteins [BR:
brhi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
104493953 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
AAA
BRCT
AAA_14
Rad17
AAA_22
AAA_16
PTCB-BRCT
AAA_5
RuvB_N
AAA_18
BRCT_2
AAA_30
RNA_helicase
AAA_17
AAA_33
nSTAND3
AAA_7
NTPase_1
AAA_19
TCAD2
Motif
Other DBs
NCBI-GeneID:
104493953
NCBI-ProteinID:
XP_010135025
LinkDB
All DBs
Position
Unknown
AA seq
1151 aa
AA seq
DB search
DIRKFFGVVPAGKRQECETVKKSEKIKNGEGPSSGKKRGKETKVSNSPSEDDRKQKRTNK
KRRIIYDSDSEEEVQSVKKSKKPSEKKADISKPGKVQKRDPVVYISETDEEDDFVNKRIS
LRPKENGTSAIGCLGTTTVKKEDVKPRANSKPLSPVKQTPTTALDFFGTSSVQRSEKKLV
ASKRKEPSQSRESTLDDEAIARQLQLEEDSELERQLHEDEEFAKTLAMLDETPQKKKARK
DSGGEQSMLSIKSSPNVTERHKQSERVKATNLTGEAKNYTAKQQNKSEHPKGSRLSPRSS
DGKIARELTDKTLPLKPSSKLVSLKQKEENAEKERGDRSLVSKEKTSGKEEKITPKKEKI
SPKKAESVSPEDSEKKRNNYQAYRSFLNREGPKALGSKEIPQGAENCLEGLTFVITGVLE
CIERDEAKSLIERYGGKVTAGNVSSKTNYLVMGRDCGQSKCEKASTLGTKIIDEDGLFDL
IRTMPGKKSKYELAAETEAKKAESRPKKTPQKAEVGKRNFSPFKREADNKKYKSTPEKGD
TVKSVKKETTAVRKLMDFKWQAEKKEAPKLKGNLVSEVNEDGTERLLWVDKYKPVSLKAI
IGQQGEQSCANKLLRWLRNWHKNASEDGQAKTNKTGGKDDGAGFKAALLSGPPGVGKTTT
ASLVCKELGYSYVELNASDTRSKNSLKEVVAESLNNTSIKDFCSGTSSSVSGNHVLIMDE
VDGMAGNEDRGGIQELIGLIRHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRLEQIK
GAMMSIAFKEGLKIPPPAMQEIILAANQDIRQVLHNLNMWCAKDKSLTYDEAKTDASRAK
KDIKLGPFDVVRKVFATGEEASRMSLIDKSDLFFHDYSLAPLFVQENYVHVKPSAAGGNL
KKHLMLLSRAADSICDGDIVDKQIRSKQNWNLLPTQAIYASVLPGELMRGHMSQFPVFPS
WLGKFSSAGKHDRIIQELSMHMSLRTQMCKRTVNMEYLSCLRDAIVRPLKDFGADGVQEA
VTFMDSYCLMKEDIENIMEISTWGGKPSPFSKLDPKVKAAFTRAYNKEAHLTPYSLSSVK
TSKRQSGSVATLELNEDLNVVETQSDEDEQDSVESDAMIKQKKVKSSKLPKREKNEETTK
KEGKRKEKTRH
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
gatatccggaaattctttggtgttgtacctgctggaaagcgacaagaatgtgagactgtg
aaaaagagtgaaaaaattaaaaacggtgaaggaccctcaagtgggaagaaaaggggaaag
gagactaaggtgagtaattcacccagtgaagatgatcgcaaacaaaagcgaacaaacaag
aaaagaagaataatctatgattcagattcagaagaggaggtgcagtcagtgaaaaaatcc
aagaagccatctgagaaaaaagcagacatttcaaaacctggtaaagttcaaaagcgggat
cctgttgtttatatttcagagacagatgaagaagatgactttgtcaataaaagaatttcc
ctgagaccaaaggagaatgggacatcagcaattggttgtctgggaacaactacagtgaaa
aaggaagatgtaaaaccacgagctaacagcaaaccattatctccagtgaaacagactccc
accacggcacttgatttctttgggacaagtagtgtccaacggtcagaaaagaaactggta
gcaagtaaaaggaaagaaccttcacaaagcagagagagcacgctagatgatgaggccatt
gctaggcaactgcagcttgaagaagattcagagctggagagacagctgcatgaggatgaa
gaatttgctaaaactttggccatgttggatgaaacaccgcagaagaaaaaggctcggaaa
gattcgggaggagagcaatcaatgttgagcatcaagagcagtcctaatgtgacagagagg
cataagcagtcggaaagagtgaaagcaacaaacttgactggtgaagcaaagaactacacc
gcaaagcagcaaaataaatctgaacatcccaaaggctctcgtttatccccacgatcgtct
gatggtaaaatagcaagagagttgacggataagaccttgcctttgaaacctagctctaag
cttgtgtctctgaaacaaaaagaggagaatgctgaaaaggaaagaggtgatcgaagttta
gtatcaaaagaaaaaacttcagggaaagaagagaagataacaccgaagaaggagaaaatt
tctcctaagaaggctgagtctgtaagccctgaggactctgaaaagaagcgaaacaattat
caagcctaccgaagcttccttaatcgcgagggtccgaaagctttgggttccaaagagata
cctcagggagctgaaaactgcttggaaggcctgacgtttgtaattacgggtgtcctggag
tgtattgaaagagatgaggccaagtctctgatcgaacgttacggaggaaaagtaactgct
ggcaatgtcagcagtaagacaaactatctggttatggggcgagactgtggccaatctaaa
tgtgaaaaggcatcaactttagggacaaaaattatcgatgaggatggtctgtttgacctt
attcgaactatgccaggcaaaaagtccaaatatgagctggcagctgaaacagaggcaaag
aaagcggagtcaagacctaaaaagacaccacagaaagctgaagttggaaaaaggaatttt
agccccttcaaaagggaagctgataataaaaaatataagtctactccagaaaaaggagat
actgtcaagtctgtcaagaaagaaaccactgctgttcggaagcttatggactttaaatgg
caggcagagaagaaagaagccccaaaactgaaggggaacttggtttctgaggttaatgaa
gatggaacggagagactgctatgggtagataaatacaagcctgtgtctcttaaggcaata
attggacagcagggtgagcaaagctgtgcaaataaactgctccgatggctcagaaactgg
cacaagaatgcctcggaagatggacaagcaaagaccaataaaactggaggcaaggatgat
ggtgctggttttaaagcagcgttactttctggtccacctggagttggtaaaactacaaca
gcttctttggtttgtaaggagctgggatatagctacgtggagctgaatgcaagtgacacc
cgcagtaagaacagtctaaaggaagtagtggctgaatcgctgaacaacaccagtattaaa
gacttctgttctggcacatcctcatcagttagcggaaatcatgtattgatcatggatgaa
gtggatggtatggcaggcaatgaagacagaggagggattcaggagctgattggtttgatt
agacacacaaagatacccatcatctgtatgtgtaatgatcgcaaccatcctaaaattcgt
tccctggtccactactgttttgatcttcgttttcagagacctcgtctggaacagattaag
ggtgccatgatgtctattgcatttaaagaaggtttaaaaattccaccacctgctatgcaa
gagataatcctggcagcaaatcaggacatcaggcaggttttacataatcttaatatgtgg
tgtgcaaaagacaaatcactgacttacgatgaggctaaaacagatgccagcagagccaaa
aaggatatcaaactgggcccttttgatgttgtccggaaagtttttgctactggagaggag
gcttctcgtatgtctcttatagacaaatcggatcttttcttccatgattattccctagca
cctctctttgtccaagagaactatgtgcatgtaaaaccgtctgctgctggaggaaatctg
aaaaagcacttgatgctcttgagtagagcagctgatagtatatgtgatggtgatatagtg
gacaaacagattcgtagcaagcaaaactggaaccttcttcccacacaggctatttatgca
agtgttctccctggggagctgatgagaggtcacatgtcccagtttcctgtctttcccagc
tggctggggaaattttcatctgcaggcaagcacgatcgcatcattcaagaactgtcaatg
cacatgagcctcagaacccagatgtgcaagaggacagtaaacatggagtatttgtcgtgt
ttgcgggatgcgattgtccggcccttgaaagacttcggagcagatggtgtacaagaagct
gtaacattcatggactcttactgcttgatgaaagaagatattgaaaacatcatggaaata
agcacgtggggaggaaaacccagtcctttctcaaagctggatcccaaggtcaaagcagct
tttacacgtgcctacaacaaagaggcacatctgactccgtactcacttagttctgtcaag
acatctaaaaggcagtcgggatccgtggcgactttagaactgaatgaagacttgaatgtg
gtagagactcagtctgatgaggatgagcaagatagtgttgaaagtgatgcaatgattaag
caaaaaaaggtgaagtcttccaagctaccaaaaagagagaagaatgaagaaacaacaaaa
aaagaagggaaaagaaaagagaaaacaagacattaa
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integrated database retrieval system
