Buceros rhinoceros silvestris (rhinoceros hornbill): 104494545
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Entry
104494545 CDS
T08612
Symbol
SMG1
Name
(RefSeq) serine/threonine-protein kinase SMG1
KO
K08873
serine/threonine-protein kinase SMG1 [EC:
2.7.11.1
]
Organism
brhi
Buceros rhinoceros silvestris (rhinoceros hornbill)
Pathway
brhi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
brhi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104494545 (SMG1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
brhi01001
]
104494545 (SMG1)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brhi03019
]
104494545 (SMG1)
Enzymes [BR:
brhi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
104494545 (SMG1)
Protein kinases [BR:
brhi01001
]
Serine/threonine kinases: Other
PIKK family [OT]
104494545 (SMG1)
Messenger RNA biogenesis [BR:
brhi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
104494545 (SMG1)
mRNA cycle factors
Common to processing body (P body) and stress granule
104494545 (SMG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PI3_PI4_kinase
FATC
HEAT_ATR
HEAT
Motif
Other DBs
NCBI-GeneID:
104494545
NCBI-ProteinID:
XP_010135699
LinkDB
All DBs
Position
Unknown
AA seq
2392 aa
AA seq
DB search
MKKLLPNMLSPDPRELQKAVEVQLLRSSVCLATAVNHIEQEQKWQSISENVIKYLKQTSR
IAIGPLRLSTLTVSQSLPVLSTLQLYCSSALENTVSNRLTSEDCLIPLFNDALRSCKQHD
VRPWMHALRYTVYQNQLMEKLKEPTVPIKSHLMELGLTAAKFARKRGNIALATRLLAQCS
EVQLGKTTTAQDLVQHFKKLSAPGQMDEKWGPELDIEKTKLLYTAGQSTHAMEMLSSCAI
SFCKSAKAEYAVAKSILTLAKWIQAEWKEISGQLKQVYRARQQQNHTGLSTLSKNIYNLI
DLPAVNTLEEEYPRIESESTVNIGVGEPEFILGQLYHLSSVQAPEVAKSWAALASWAYRW
GRKVVDNASQGEGVRLLPREKCEVQNLLPDHIAEEDKEKIYGILGQAVCRPAGIQDEDMT
LQITENEDNEEDDMVDVIWRQLLTSCPWLSDLDENASEGLIKVWRKVVDRIFSLYKLSCS
AYFTFLKLNAGQVPLDEDDPRLHLRNTSEQSTDDVIVMATLRLLRLLVKHAGELRQYLEH
GLETTPTAPWRGIIPQLFSRLNHPEVYVRQSICNLLCRVAQDSPHLILYPAIVGTISLSS
ESQTSGNKLPSAIPTLLGNIQGEELLGGECDGESAPASQESSKDDTKVGLNEDQAMMQDC
YSKIVEKLSAANPTMVLQVQMLVAELRRVTVLWDELWLGVLLQQHMYVLRRIQQLEDEVK
RVQNNNTLRKEEKIAIMREKHTALMKPIVFALEHVRSITAAPAETPHEKWFQDTYGDAIE
NALEKLKNPLNPAKPGSSWLPFKEVMLSLQQRAQKRASYLLRLEEISPWLAAMMNTEIAL
PGEVSTRDTVTIHSVSSTITILPTKTKPKKLLFLGSDGKNYPYLFKGLEDLHLDERIMQF
LSIVNTMFATINRQETPRFHARHYSVTPLGTRSGLIQWVDGATPLFGLYKRWQQREAALQ
AQKAQDSYQTPQNPGIVPRPSELYYSKIGPALKAVGLSLDVSRRDWPLNVMRAVLEELME
ATPPNLLAKELWSSCTTADEWWRVTQSYARSTAVMSMVGYIIGLGDRHLDNVLIDMTTGE
VVHIDYNVCFEKGKSLRVPEKVPFRMTHNIETALGVTGVEGVFRLSCEQVLHIMRRGRET
LLTLLEAFVYDPLVDWTAGGEAGFAGAVYGGGGQQAENKQSKREMERDITRSLFSSRVAE
IKVNWFKNRDEMLAVLPKLDSSLEEYLNLQEQLTDVEKLQGKLLEEIEFLEGAEGVDHPA
HTLQHRYSEHTQLQSQQRAVQEAIQVKLNEFEQWITHYQTAFSNLEATQLASLLQEISTQ
MDLGPPSYVPATTFLQNAGQAHLISQCEQLEGEVGALLQQRRSVLRGCLEQLHNYATVAL
QYPKAVFQKHRIEQWKTWMEELIRNMTIERCQDIFRKYEKQYAPQPPPTMCQFITATEMT
LQRYAADINNRLIRQVERLKQEAVTVPVCEEQLKEIERCIKVFLHENGEEGSLSLASVII
SALCTLTRRNLMMEGAASSAGEQLVDLTSRDGAWFLEELCSMSGNVTCLVQLLKQCHLVP
QDLDIPNPIEASEAVHLANGVYISLQELNSNFRQIIFPEALRCLMKGEYTLESMLHELDN
LIEQTTDGVPLQTLVDSLQAYLRNAAMGLEEETHTHYIDVARVLHAQYGELIQPRNGSVD
ETPKMSAGQMLLVAFDGMFAQVETAFGLLIEKLNKMEIPVAWRKIDIIREARSTQVNFFD
DDNNRQVLEEIFFLKRLQTIKEFFRLCGTFSKTLSGISSLEDQNAVNGPVQIVNVKALYR
NSCFSEDQMAKPIKAFTADFVRQLLIGLPNQALGLTLCSFISALGVDIIAQVEAKDFGAE
SKVSVDDLCKKAVEHNIQIGKFSQLVMNRATVLASSYDTAWKKHDLVRRLETSISSCKTS
LQRVQLHIAMFQWQHEDLLISRPQAISVTPPPRSAILASMKKKLHTLSQIEASIATVQEK
LGTLEASIEQRLKWAGGANPALAPVLQDFDATIAERRNLVLKESQRASQVTFLCSNIIHF
ESLRTRTAEALNLDAALFELLKRCQQMCSFASQFNSSVSELELRLLQRVGTGLEHPIGSS
EWLHSAHKQLSQEISTQRTVQTEREHQIETVCETIQNLVDSIKTVLTGHNRQLGDVKHLL
KAMSKDEEAALADGEDVPYENSVRQFLSEYKSWQDNIQTVLFTLVQVMGQVRSQEHVEML
QEITPTLKELKIQSQSVYNNLVGFASPLVTDTSNECSSPTSAAAYQPTFAAAVRSNTGQK
TQPEVMSQNARKLIQKNLATSADTPPSTVPGTGKSVACSPKKTARDPKTGKAVQERNSYA
VSVWKRVKAKLEGRDVDPNRRMSVAEQVDFVIKEATNLDNLAQLYEGWTAWV
NT seq
7179 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagctccttcctaatatgctaagtcccgatccaagagaacttcaaaaagcagtt
gaagtacagcttttgagaagttcagtttgtctggcaacagctgtaaaccacatagaacag
gagcaaaagtggcagtcaatatctgaaaatgttattaagtacttaaagcaaacatcacga
attgctattggacccctaaggctttccacactcactgtgtctcagtctttaccagtgttg
agcactctgcagttgtattgttcttctgctttggaaaacactgtatccaacaggctgaca
tctgaggactgccttattcctctcttcaatgatgctttgaggtcatgcaaacagcacgat
gttaggccgtggatgcatgcactgaggtacacggtgtaccagaatcaactgatggaaaaa
cttaaagaaccaacagtcccaattaaaagccatctaatggagctgggcctaacagcagcg
aaatttgcacgaaagcgaggaaatattgccctggctacacgacttcttgcccagtgcagt
gaagttcagctgggaaaaaccactactgcacaagacttagttcagcactttaaaaaattg
tctgcaccaggtcagatggatgaaaaatggggtcctgaacttgatattgagaaaacaaaa
ttgttatacacagcaggtcagtcaacacatgccatggaaatgctgagttcttgtgctata
tccttctgcaaatctgccaaagctgaatatgcagttgctaaatctattcttacgttggct
aaatggattcaagcagaatggaaagagatttcaggacagttgaaacaagtatatagagct
cgacagcagcagaatcacactggtctgtctactctgtctaaaaacatatataatttgatt
gatctcccagctgttaatacactagaagaagaatatcctaggattgaaagtgaatctaca
gtaaatattggagtcggagagcctgagttcatcttgggacagctctatcacttgtcttca
gtacaggcacctgaagtagccaagtcttgggcagccctggctagttgggcttacagatgg
ggccggaaagtagttgataatgccagtcagggagaaggtgttcgtctgctgccccgggaa
aaatgtgaggttcagaacttgcttccagaccacattgcagaggaagataaagagaaaatc
tatggcattcttgggcaggcggtgtgtcgtccagctgggattcaagatgaagatatgact
ctacaaatcactgaaaatgaagacaatgaagaagatgatatggtggatgttatatggcgt
cagttattaaccagttgtccctggctttcagatcttgatgaaaatgcctcagaagggtta
attaaagtgtggaggaaagttgtagacagaatcttcagtctctataaactctcttgcagc
gcatacttcactttcctcaaactcaatgctggtcaggttccacttgatgaagatgatccc
aggttgcacttaagaaatacttctgagcaaagcacggatgatgttattgtgatggcaacc
ctgagactactacgattgcttgtgaaacatgctggagaacttagacagtatctagagcat
gggctagaaactacacctactgctccttggagaggtattatacctcagcttttctcccgc
ctgaatcacccagaagtgtatgttcgtcagagtatctgcaacttactgtgtcgagtggct
caagattctcctcatcttatactatatcctgcaatagtgggtaccatttcacttagcagt
gaatcccagacttcaggaaacaagctgccttctgctatccctactttgctaggtaatatt
caaggagaagaactgctgggtggtgaatgtgatggagagagcgccccagcttctcaagaa
agtagtaaagatgacacaaaagttggattaaatgaagatcaagcgatgatgcaggattgt
tacagtaaaattgtggagaaactctctgctgcaaatccaacaatggtattgcaggttcag
atgctggtggctgagctgcgcagagttacagttctttgggatgaactttggttgggagtt
ttactgcagcagcacatgtatgtcctcagaaggattcaacaattggaagatgaagtcaag
agggtccaaaacaacaacactttaaggaaagaggagaaaatagcaatcatgcgtgaaaag
catacagctctgatgaagcccattgtgtttgctttggaacacgtgcggagcatcactgca
gctcctgcagaaactcctcatgagaaatggtttcaggatacctatggagacgcaattgaa
aacgcgctagagaagcttaagaatcctttgaatcctgctaaacctggaagcagctggctc
ccattcaaagaggttatgctaagtttgcagcaaagagcacagaaacgggctagttacctt
ttacgactcgaagaaatcagtccttggttggcagccatgatgaacactgaaatagcactt
cctggagaagtatctaccagagacacagtcacgattcatagtgtgagcagcaccatcaca
atcctgcccaccaaaaccaaacctaaaaagctgcttttcctgggttcagatgggaagaac
tatccctacctcttcaaaggtttggaagacttgcatctagatgaaagaatcatgcaattt
ttatcaattgtgaacacaatgtttgctactattaaccgtcaagagacaccaaggttccat
gcaaggcactactctgtgacacctctgggaacaagatcaggcttgatccagtgggtggat
ggagctactcctttgtttggtctttacaagaggtggcaacagagagaagccgctttacaa
gcacaaaaggctcaggactcttaccagactcctcagaatcctggaatagtgcctagaccc
agtgaactttactacagtaaaattggacccgctttaaaggcggttggacttagtcttgat
gtgtcacgtcgtgactggcccttgaatgtgatgagggctgttctagaagagctgatggag
gccactcccccaaatcttctagctaaggagctctggtcatcatgtactacagcggatgaa
tggtggagagttacacagtcgtatgcaagatccactgcagttatgtccatggttggctac
atcattggtcttggagacagacatctggataatgttcttatagatatgactacaggagaa
gttgtccacatagattataatgtttgctttgaaaaagggaaaagccttagggtaccagag
aaggttccgttccggatgacgcacaatattgaaacagcacttggagtgacaggagttgaa
ggggttttcaggctttcttgtgaacaggtccttcatattatgcggcgtgggagagagact
ttgcttacattgcttgaagcttttgtttatgatcctctggtggactggacagcaggagga
gaagcaggatttgctggagctgtctatggtggtggtggccagcaggctgaaaacaaacaa
agcaaaagggaaatggaaagagatattacacgtagtctcttttcttcaagagtggctgag
ataaaggttaactggtttaagaacagagatgaaatgcttgctgtgctgccaaaattggac
agtagtttagaagagtatctgaacctgcaagagcagttgacagatgtagaaaagttgcaa
ggaaaactactggaggagatagaatttctggaaggcgcagaaggagtggatcatcctgcc
cacacgcttcagcacaggtattctgagcacacgcagttgcagtctcaacaaagagctgtc
caggaagcaatccaggtgaagctgaatgagtttgagcagtggataacacattaccaaact
gctttcagtaatttagaggcaacgcaacttgcaagtcttcttcaagaaattagcacacag
atggacttaggtcctccaagttacgtaccggcaacaacgtttctgcaaaatgcaggccag
gcacatctaatcagtcaatgtgaacaactggaaggagaagttggtgctcttctccagcag
agaagatcggtgttacgtggttgtcttgagcaattacacaattacgcaacagtagctctg
cagtatccaaaggctgtgtttcagaagcaccgaatagagcagtggaaaacctggatggaa
gaactcatccgtaacatgacaatagagcgttgtcaggatatctttaggaagtatgaaaag
cagtatgctcctcaaccacctccaactatgtgtcagttcataaccgctacagagatgact
ctccagcgctatgcagctgatataaataacagacttatcaggcaggtagaacgtttgaaa
caggaggcagttactgtccctgtttgtgaagagcagctgaaagaaattgaacgttgcata
aaagttttccttcatgaaaatggcgaggagggctcgctgagcttagcaagcgttatcatc
tctgctctttgtacactgacaaggcgaaatctgatgatggaaggcgcagcatctagtgct
ggagagcaactggttgacttgacttcaagagatggagcctggttcttggaggagctttgc
agcatgagtgggaatgttacgtgcctcgtgcagttactgaagcagtgtcatcttgtaccc
caggacttggatattcctaacccaattgaagcatcagaagctgttcacttagcaaatgga
gtttatatctcacttcaggaattgaactcaaacttccgacagatcatttttcctgaagca
cttcggtgcttaatgaaaggagagtatactttagaaagtatgctccacgaattagataat
cttattgaacaaacaactgacggagtcccgctgcaaacattggttgattctcttcaggcc
tacttacgaaatgctgctatgggactagaggaagaaacacatactcattacattgatgtt
gcaagagtacttcatgctcagtacggtgagctgattcagccaagaaatggctcagtggat
gaaactcccaaaatgtcagctggtcagatgcttttggtagcctttgatggaatgtttgct
caagtggaaactgcatttggtttattgattgaaaagctaaacaagatggaaatacctgtg
gcttggcgtaagattgacataattagggaagcccgcagcacccaagttaacttctttgat
gatgacaataatcggcaagttctagaggaaattttctttctgaagagactgcaaacaatt
aaagaatttttcaggctttgtggtaccttttctaaaacactgtcaggcatcagttcactt
gaagaccagaatgcagtaaacggacctgttcagattgtcaatgtaaaagcactttacaga
aactcttgttttagtgaagaccaaatggccaaaccaatcaaagcttttacagctgacttt
gtgagacagcttttaattggccttccaaatcaagctttgggactgactttgtgcagtttc
atcagcgcgctgggtgtcgatatcattgctcaggtagaggctaaagactttggagcggaa
agcaaagtttctgtggatgacctttgcaagaaagctgtggagcacaatatccaaattggc
aagttctcccagttggtcatgaacagggcaacagtattagctagttcctacgatacagca
tggaagaagcatgatctagtgcgcagacttgaaaccagtatttcatcttgcaagaccagt
cttcagagagtacagctgcatattgccatgttccagtggcagcatgaagatctcctcatc
agtcgcccacaagcgatttctgttactcctccacctcgttctgcaattttagccagcatg
aagaagaaacttcacacgctcagtcagattgaagcttcaattgcaacagtccaggagaaa
ctaggaacacttgaagcgagtatcgagcagcgtttaaaatgggcagggggtgctaatcct
gcactggcaccagtcttgcaagattttgatgccactattgctgaaagaagaaaccttgta
ctgaaagaaagtcaaagagcgagtcaggtcacttttctctgcagtaacataattcatttc
gaaagtttacgtactagaacagcagaagccttaaatctcgatgctgcattatttgaactt
ctcaaacgctgtcaacaaatgtgctcgtttgcgtcgcagttcaacagctcagtctctgaa
ctggagcttcgcctgcttcagagagtgggcacgggtcttgaacatcctattggcagctct
gaatggcttcactctgctcacaagcagttgtcccaggaaatatctacacagagaacagta
caaacagaaagagaacatcaaatagaaacagtttgtgaaacaattcagaatctggtggat
agtattaaaactgtgctcacgggtcataaccgacaacttggagatgtcaaacacctgctg
aaagctatgtcaaaggatgaagaagcagctctggcagatggtgaagatgttccctatgag
aatagtgttaggcagttcttgagtgaatataaatcgtggcaagataatattcagacagtt
ttgtttacattagttcaggttatgggtcaagtccgcagtcaggaacatgttgaaatgctg
caggaaataactcccaccttgaaagaactaaaaatacagagccaaagtgtctacaataat
ctagtgggttttgcatcacccttagtcacggatacatcaaatgaatgctcaagcccaacg
tcagctgctgcgtatcagccaacctttgctgcagctgtacgtagcaatacagggcagaaa
actcagccagaggtgatgtcacagaatgcaagaaagctaattcagaaaaatcttgccacg
tcagcagatactcctccaagcacagtcccaggaactggcaaaagtgttgcctgtagtccc
aaaaagacagccagggaccctaaaacaggaaaagccgtgcaggaaaggaattcatatgca
gttagcgtgtggaagcgggtcaaagccaagttggagggccgagatgtggatcccaacagg
agaatgtctgttgctgaacaggttgactttgtgattaaggaagcaactaatctagataac
ttggctcagctgtatgaaggttggactgcctgggtatga
DBGET
integrated database retrieval system
