Buceros rhinoceros silvestris (rhinoceros hornbill): 104495905
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Entry
104495905 CDS
T08612
Symbol
VPS8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
brhi
Buceros rhinoceros silvestris (rhinoceros hornbill)
Pathway
brhi04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
brhi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
104495905 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
brhi04131
]
104495905 (VPS8)
Membrane trafficking [BR:
brhi04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
104495905 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
Beta-prop_WDR36-Utp21_1st
TPR_VPS8_2
zf-RING_Vps41
WD40_CDC20-Fz
TPR_Vps41
Clathrin
zf-RING_11
zf_RING_Vps8_fungal
zf-RING_2
Beta-prop_WDR5
zf-RING_UBOX
Beta-prop_WDR3_1st
WDR55
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
104495905
NCBI-ProteinID:
XP_010137288
LinkDB
All DBs
Position
Unknown
AA seq
1355 aa
AA seq
DB search
IDDKEFDIPQVDTPPTLESILNETDDEEESFILEDPFLLNIDNTDTHSYDTSSVASSDSG
DRTHLKRKKKLPDSLSLHGSVIRLSLLKGISAQIVSAADKVDAGLPTAIATSNLIAVGTS
HGLALIFDQNQALRLCLGSTAVGAQYGAISALSINNDCSRLLCGFAKGQITMWDLASGKL
LRSITDAHPPGTAILHIKFTDDPTLAICNDSGGSVFELSFKRVMGVRTCESRCLFSGSKG
EVCCIEPLHAKVELRDHPITQYSLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPL
LAWHFVAVQNSVNPMLAFCRGDVVHFLLVKRDESGAIHVTKQRQLHLHYDLINFTWINSR
TAVLLDSVEKLHVIDRQTQEELETIEISEVQLVYNSSHFKSLATGGNVSEALALVGEKAC
YQSISSCGGQIFYLGTKSVHVMTLRSWRERVDHLLKQERLTDALALAWSFYEGKAKAVVG
LSGDTSKRKAVIADRMVEILLHYADRTLKKCPDQGKIQVMEQHFQDVVPVIVDYCLLLQR
MDLLFNQIYDKMSENSVAKGIFLECLEPYILSDKLMGITAQVMKDLLLHFQDKNRLENLE
ACIVHMDITSLDIQQVVLLCWENHLYDAMIYVYNSGMNDFISPMEKLFRVIAPPLNAGKS
LTDEQVVMGNKLLVYISCCLAGRAYPLGDIPEDLVPLVKNQVFEFLIRLHSTEGSVDEEV
YPYVRTLLHFDTREFLNVLALTFEDFKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGC
LFTFLARQLAKPNNTLFVNRTLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEE
SRLIQMAEKAEFYQICEFMYERELRYDKIIGCYLRDPMRKEEVFNYIHNILSMPGYSAEE
KQSVWQKALEHIEELLLLSPCKAADLVAIHFSEQIESIVTNLQDQFLLFQFLRSLLDPRE
GINQDLIHLPPCITEQFIELLCQYSPDQVLETLKVLEYCRLEETIQITQKYQLHEASSYL
LEKKGDVHGAFLVMLERLQSKLLMLTQDDEGSAQVPLLESIEDTLMKTIALCQRNSHNLD
QQQREALWFPLLEAMMSPQKLSGSSQCRYSESLKSLTMQVLNNMAAFIALPSILQRILQD
PVYGKGKLGEIQGLVLGMLDTFNYEQTLLETTTNLLNHDLHWSLCNLRASVTRGLTPKQD
YCCICLQQYKRRQETADEIIVFSCGHLYHSLCLLSKECGTVTKGLMRWMCYKCNSSNKGG
KLSENFSELKKGSRASLAQTSSESLLDPQQIQAFDQLCRLNRGTSRLALLTELSRGHGGE
KHGLLSVSHGDSATSSVFQNENFQLHLAPPPLAED
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
attgatgacaaagaatttgacattcctcaagttgatactcctccaacactggagagcatc
ttaaatgagactgatgatgaagaagagtctttcattttggaggatccctttctcttgaac
attgataacacggatacgcactcctacgacacatcttctgtagcaagctctgacagcggg
gaccgcacacatctgaaaaggaagaagaaactcccagattctctctcactccatggatca
gttatacggctctcgcttctgaaaggaatttctgctcaaatagtgtctgcagcagacaaa
gtggatgctggcttgccaactgcaattgcaacatcaaatctgatagcagtggggacttcc
catgggttagcgctgatatttgatcaaaaccaggctcttcgcctgtgtctgggcagcact
gctgttggggcccagtatggggctatatcggctctcagcatcaacaatgactgttcgagg
ctcctgtgtggctttgcaaaaggacagatcacaatgtgggatctggccagtgggaagctg
ctacggtcaataacagatgcccacccaccaggaacagccattttgcacatcaagtttaca
gatgacccgacgcttgcaatttgcaatgacagcggaggctccgtatttgaactgtcattt
aagagggttatgggagtgagaacgtgtgaatctcgatgtctcttcagtggctcaaagggg
gaagtttgctgtattgaaccattacatgcaaaagttgagctgagagaccatcctatcacc
cagtattcactgttggccatggcctctctaacaaagatactggttattggcctgaaacca
tctctcaaagtgtggatgacctttccttatggtcgtatggacccttctagtgtccctctt
ctggcatggcactttgtggctgtacagaactctgtgaaccccatgcttgcattttgtcga
ggagacgtcgttcattttcttctggtaaagagagatgaatctggtgcaatacatgtcact
aagcagaggcagcttcatctacactatgacctcatcaactttacttggataaactcacgg
acagcagtgctgctggatagcgtggagaagctgcatgttatagatcgacagacacaggag
gagctggagaccatagagatctcagaagttcagctagtctacaacagcagccacttcaaa
tcgctggctacgggaggcaacgtcagcgaagctctggcactggttggagagaaagcttgt
taccaatccatcagcagctgtggtggccagatcttttaccttggaactaagtctgttcac
gtaatgacattgagaagctggagagagagagttgaccaccttctgaaacaagagcgtctc
actgatgccctggctctagcttggtctttttatgaaggtaaagcaaaggctgtagtaggc
ttgtccggggacacaagcaagcggaaagcagtcattgcagacaggatggtcgaaatcctc
ctccattatgctgatcggactttgaagaaatgtcctgaccaaggaaagatccaggttatg
gagcaacattttcaggatgtggtgcctgtcatagttgattactgtctcttactccagcgc
atggatctattatttaaccagatatatgataagatgagtgagaattctgtagctaaaggc
atctttctggagtgcttggagccatatattttaagcgataagctgatgggaatcacagct
caagtgatgaaagacttgctgcttcacttccaagacaagaacaggttggaaaatttggaa
gcttgcattgtacatatggatatcaccagcttagacatacagcaggtagttcttctgtgc
tgggaaaaccatctctatgatgccatgatctatgtctacaacagtgggatgaatgacttc
attagtcccatggagaagctcttcagagtcattgctcctcctctgaatgctggaaagtct
ctcacagatgagcaggtggtaatgggcaacaagctgcttgtatacataagctgctgcttg
gcaggccgtgcatatccattgggtgatattcctgaagatctggtgcctttggttaaaaat
caggtctttgaatttctcatccggctgcattctactgagggatctgtggatgaagaggtc
tacccttatgttcgtaccttgctgcactttgacactcgggaattccttaatgttcttgct
ctgacttttgaagactttaagaatgacaagcaagctgtggaatatcagcagagaatcgtg
gacatacttctgaaagtcatggtagagaattctgacttcaccccatcgcaggttggctgt
ctctttaccttccttgcccgtcagctcgcgaagcccaacaacaccttgtttgtgaacagg
acactttttgaccaggtccttgaatttctgtgcagcccagatgatgactcccgccattcg
gagaggcaacaggtccttttagaattgctccaggcaggagggatagtacagtttgaagag
agtcgacttatccaaatggcagaaaaagctgaattctatcagatttgtgagttcatgtat
gagcgagagcttcgctatgacaaaataattggctgttacctgcgtgatcccatgagaaag
gaagaagttttcaactatattcacaacatcctctccatgcctggctacagtgctgaagaa
aagcagtcggtatggcagaaagctttggaacatatagaggagctgttgttgctgagccca
tgtaaagcagccgacttggtagccattcacttcagcgagcagattgagagcatcgttaca
aaccttcaggaccagtttttactcttccagtttctgaggagtctccttgatccgagagaa
ggcattaaccaggacctgatacacttaccaccctgcatcactgagcagttcattgagctg
ctctgtcagtacagcccagaccaagttttggagacgcttaaggttctggaatactgcagg
ctggaagaaaccatccagataacccagaaatatcagctccatgaagcttcttcatattta
ctggagaagaagggagatgtccatggtgcctttttggttatgcttgagcgattgcagagc
aagttgctgatgcttacgcaagatgatgaaggctcagctcaagtccccttgctagaaagc
attgaagataccttaatgaaaacaattgccctttgccagagaaattcacacaatttagac
caacaacagcgagaggccctctggtttcccctgctggaggctatgatgtccccacagaaa
ttatctggttcttcccagtgtcgatactctgagtctttgaagagtctgacaatgcaagtg
ctcaacaacatggctgcatttattgctcttccttcaatcctgcagagaattctacaggat
ccagtttacgggaaggggaaacttggagaaattcaaggacttgtcctgggaatgctggac
acttttaactatgagcaaacccttttagagacgactacgaatcttttaaaccatgatctc
cactggtccttgtgtaacctaagagcttctgtcactagagggcttaccccaaagcaggat
tactgctgcatttgtctacagcagtacaaaagaaggcaagaaactgctgatgaaatcatt
gttttcagctgtggccacttgtaccattcgctgtgtctgctgagtaaagagtgtgggacg
gtaactaaaggcctgatgaggtggatgtgctataaatgcaactcgagtaacaagggagga
aaactgagtgagaacttttcagagctgaaaaaaggaagcagagcatccttggcacagacg
agttcagagtctctgctggatcctcagcaaatccaagcttttgaccaactctgccgactc
aaccgaggaacctccagactggctctcctgacagaactgtctcgtggccatggcggtgaa
aagcacgggctgctcagcgtttcccacggtgactctgccaccagcagtgtcttccagaac
gagaacttccagctccatctggccccgcctccgctggctgaagactag
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integrated database retrieval system
