Buceros rhinoceros silvestris (rhinoceros hornbill): 104496065
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Entry
104496065 CDS
T08612
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
brhi
Buceros rhinoceros silvestris (rhinoceros hornbill)
Pathway
brhi05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
brhi00001
]
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
104496065 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
brhi01001
]
104496065 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
brhi04054
]
104496065 (CIITA)
Enzymes [BR:
brhi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
104496065 (CIITA)
Protein kinases [BR:
brhi01001
]
Serine/threonine kinases: Other
TAF1 family
104496065 (CIITA)
Pattern recognition receptors [BR:
brhi04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
104496065 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_4
LRR_6
NLRC4_HD2
LRR_8
LRR_14
LRR_9
NB-ARC
nSTAND_NTPase5
NPHP3_N
RsgA_GTPase
RNA_helicase
nSTAND3
Motif
Other DBs
NCBI-GeneID:
104496065
NCBI-ProteinID:
XP_010137436
LinkDB
All DBs
Position
Unknown
AA seq
838 aa
AA seq
DB search
LEMFKEVQVPIIPSEAPFKRPKPVETFCTSLMDYFRDVCKSVAAERGVALDHLFIDGTLV
QRQTETKTGKNSIKAVEKELITCNLQGKEKTAIKRSQIFQIPGGKDLETKVIVVLGKAGM
GKSILVQKICQDWSNGELSQFEFVFWFDYKQISLPEKRYSLQDLLLDFLVKPQEGSKEIF
EYILHNPAKVLLVFDGFEGLHDHEHSPRCSASQPETDLCSIKELLSGLIKKKVLSGCTLL
LTARPKDKVYQHVSKVDKTIEIVGFSPQQRELYITKYFEGLPDCGNALKLIKESEYLFSH
CYSPVMCRFVCFVCETVLERGDKSLPSTLTTVFLKFVQQKIMPTRTDVTAVQNEENLAAL
ARIAWCLGEKNQSAMKSDLLPSKEVKEFALKYGFFLPFVFPRHSDSGEEEFGTTFADFVV
QNFLGALHLMLAEETKDKSLTKYLSFPSKKKKLYNWLDLVPRFLAGLLFLQDDPYFCSFS
NKDVNQSNKKQKTLLKYIRRLQINELCPETLLELLHFIYETQSKYLLQHVALRLKPDLSF
LDVVLTPPDVYVLHSTLKRSKEEFSLDLRNSSIDMQGLKDLVGLKNVASFRASLSDTIRL
WKSLEQTKDYQLLRASTEKFVLDPFKAKTMKDVSDLSELVEMQKMMINCAQDASGRSSYE
ILAIKNLRKLAFAMGPVRGLQGFLKLVEILAAFPSLRHLDLDALSENGIGDEGAKSLSEV
FPTLTSLETLNLSQNKITDVGAEKLATALPSLSSLKTLSLYNNSICDFGAENLAKVLPAM
ASLRVLDIQYNKITGVGAQQLTDSLRKCPHIKKLVMWNPTIPYGVLEHLQQLDSRISL
NT seq
2519 nt
NT seq
+upstream
nt +downstream
nt
gtttagaaatgttcaaagaagtccaagttcccataattccttctgaagcacctttcaaaa
gaccaaagccagtggaaactttctgtacctctctcatggattatttccgagacgtgtgca
agtctgtggccgcagagcgtggagtagctcttgatcacctgtttattgatggaaccctcg
ttcaaaggcaaactgaaaccaagactgggaagaatagcataaaagcggtggaaaaggagc
tgataacttgcaatctgcaagggaaggaaaagacagccattaaaagaagccaaatatttc
agatcccgggaggtaaagacttagagactaaagtgattgtggtgctgggaaaagcaggga
tgggcaaaagcattcttgttcagaagatctgccaggactggtccaatggagagctttctc
agtttgaatttgtattttggtttgactacaaacaaataagcttgcccgagaagcgataca
gcctgcaggatctgcttcttgattttcttgtaaaacctcaggagggaagcaaagagatct
ttgagtatatattgcacaatcctgctaaagtccttctagtttttgatggttttgaagggt
tgcacgatcacgagcattctcctcgctgctcagccagccagcctgaaacggacttgtgca
gtataaaggagctgctttcaggactcatcaaaaaaaaagtactcagtggttgtactttat
tacttacagcaagaccaaaagacaaggtgtaccagcatgtgtccaaagtggataagacta
ttgagatagtgggattttcccctcagcagagagaattgtacataaccaagtactttgaag
gcttacccgactgcgggaacgcgctgaaattaatcaaagagagtgagtacttgttcagtc
actgttacagcccggttatgtgtcgatttgtttgttttgtctgtgagacagtacttgaaa
ggggagacaaaagccttccttcaactctaactacagtcttcctgaaatttgttcagcaaa
agataatgcctacgcgaacagacgttacagctgtgcaaaatgaagagaatcttgctgcac
tagcccgtatagcctggtgtcttggagaaaagaaccaaagtgccatgaaaagcgatcttc
ttccttctaaggaagttaaagagtttgctctgaaatatggatttttcctgccatttgtgt
tccccagacattcagatagtggagaagaggaatttgggaccacatttgctgattttgtcg
ttcagaatttcttgggtgcgcttcatcttatgttagcagaagagaccaaggataaaagtc
taacaaagtacctgtcctttccatctaagaagaaaaaactttataactggttagatttag
tgcctcgatttttggctggattgttgttcctccaggatgacccctacttctgctcctttt
caaacaaggatgtaaatcaatcaaacaagaagcagaaaaccctcttgaaatatattagaa
ggctgcaaataaatgagctctgtccagagacgttacttgagctgttacattttatttatg
aaacacaaagcaagtatcttttgcagcatgtggccttaaggctcaagccagacctgtctt
ttctggacgtagttcttacaccacctgatgtctatgtactgcactctactttaaaaaggt
caaaagaagagttttccttggatttgcgaaacagcagcattgacatgcaagggctgaaag
acttggttggcctaaagaatgtggcatcattcagggcctccctcagtgatacaatcaggc
tctggaaatctttagaacagacaaaagactaccagctgctgagagcatcaacagagaaat
ttgttcttgatccctttaaggcaaagacaatgaaagacgtcagtgacctttcagaactgg
tagagatgcagaagatgatgataaactgtgcgcaagatgcatctggtcgcagcagctatg
aaattcttgccatcaaaaacctcagaaaactggcatttgcgatgggtccagtccggggcc
ttcagggatttctaaaacttgtggaaattcttgcagcgtttccatcacttcggcatttag
accttgatgctctgagtgaaaatggcataggagatgaaggagcaaagagtctctctgaag
tctttccaaccctgacatcactggaaacattaaacttatcacagaacaagataacagatg
tgggtgcggagaaactagctacagcccttccttccttgtcgtctttaaagacactgagct
tgtacaataacagcatttgcgattttggagcagaaaatcttgcaaaagtccttcctgcga
tggcatctttaagagtgctagacattcagtataacaaaataactggtgttggagcccagc
agctgactgacagcctacggaaatgtccccacataaagaagttggtgatgtggaatccaa
ccattccctatggagttcttgaacaccttcagcagctggactctaggatcagtctgtag
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