Buceros rhinoceros silvestris (rhinoceros hornbill): 104497363
Help
Entry
104497363 CDS
T08612
Symbol
COL6A3
Name
(RefSeq) collagen alpha-3(VI) chain
KO
K06238
collagen type VI alpha
Organism
brhi
Buceros rhinoceros silvestris (rhinoceros hornbill)
Pathway
brhi04510
Focal adhesion
brhi04512
ECM-receptor interaction
brhi04518
Integrin signaling
brhi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
brhi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104497363 (COL6A3)
04518 Integrin signaling
104497363 (COL6A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104497363 (COL6A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104497363 (COL6A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
brhi04147
]
104497363 (COL6A3)
00536 Glycosaminoglycan binding proteins [BR:
brhi00536
]
104497363 (COL6A3)
Exosome [BR:
brhi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
104497363 (COL6A3)
Glycosaminoglycan binding proteins [BR:
brhi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104497363 (COL6A3)
Hyaluronan
Extracellular matrix or blood plasma proteins
104497363 (COL6A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
VWA_3
Kunitz_BPTI
fn3
Motif
Other DBs
NCBI-GeneID:
104497363
NCBI-ProteinID:
XP_010138904
LinkDB
All DBs
Position
Unknown
AA seq
3137 aa
AA seq
DB search
MRKHRHLPLVAIFCLLLSGFCSVWAQQQAAVKTVAVADIIFLVDSSWSIGKEHFQLIREF
LYDVVKALDVGGNDFRFALVQFSGNPHTEFQLNTYPSTKDVLSHIANMPYMGGDTKTGKG
LEYLIENHLTKAAGSRASEGVPQVIIVLTDGQSQDDVALPSSVLKSAHVNMFAVGVQDAV
EGELKEIASEPFDMHLFNLENFTALHGIVGDLVMSVRSSMTPEKAGATGLVKDITAQESA
DLIFLIDGSNNIGSVNFQAIRDFLVNLIESLRVGAQQIRIGVVQYSDQPRTEFALNSYST
KADVLDAVKALSFRGGEEANTGAALEFVVENLFTQAGGSRIEEAVPQILVLISGGESSDD
IREGLLAVKQASIFSFSIGVLNADSAELQQIATDGTFAFTALDIHNLDGLQELLLPNIVG
VAQRLILLEAPTIVTEVIEVNKKDVVFLIDGSTALGTAPFNAIRDFVAKIVQRLEVGPDL
IQVAVAQYADTVKPEFYFNTHQTRKDVMSNVKRMKPMGGTALNTGSALDFVRNNFFTSAA
GCRIAEGVLPMLVLITGGKSRDAVDQAAAEMKRNRIVILAIGSKNADLAELQEIAHERDF
VFNPNDFRLQFMQAILPEVLSPIRTLSGATIVQEPPSVQVTKRDIIFLLDGSLNVGNANF
PFVRDFVATLVNYLDVGSDKIRVGLVQFSDTPKTEFFLYSYQTKSDIIQRMGQLRPKGGS
VLNTGSALNFVLSNHFTEAGGSRINDQVPQVLVLVMAGKSADPFLQVSNELARAGVLTFA
VGVRSADKAELEQIAFNPRMVYFMDDFSALTALPQELNKPITTYVSGGVEEVPLAPTESK
KDILFLIDGSANLLGSFPAVRDFVHKIISDLNVGPDATRVAVAQFSDTIQVEFDFHELPS
KQDMLLKVKRMKIKTGKQLNIGAALDETIRRLFVKEAGSRIEEGVPQFLVLLAAGRSTDD
VEQPSDALKQAGVVTFAIKAKNADPVELERIVYAPQFILNVDSLSRISELQPNIVNLLTT
IQLQPTVVERSEKKDVVFLIDGSDSVRRGFPLLKNFVQRVVESLDIGRDKVRVAVAQYSR
SIQPEFLLDTHEDKADLISAIQELKIMGGSPLNTGAALDYLIKNVFTVSSGSRIAEGVPQ
FLILLTADRSQDDVRRPSVVLKTSGTVPFGIGIGNADLTELQTISFLPDFAISVPDFSQL
DTVQQVISNRVIQLTKKEIESLAPDLVFTSPSPAGVKRDVVFMVDGSRYAAQEFYLIRDL
IERIVNNLDVGFDTTRISVVQFSEHPHVEFLLNAHSTKDEVQSAVRQLRPQGGQQVNLGE
ALEFVAKTIFTRPSGSRIEEGVPQFLIVLSSRKSDDDLEYPSQQVKQVGVAPMVVAKNVE
PEEMVQISLSPDYVFQVSSFQELPSLEQKLLTPIETLTGDQIRRLLGDVQPPDDASGDEK
DIVFLIDSSDGVRPDGLAHIRDFISRIVQQLDVGPNKVRIGVVQFSNNIFHEFYLKTHKS
KNAVLQAIRRMRHRGGSPVNAGKALDYVVKNYFIKSAGSRIEDGVPQHLVVILGDRSQDD
VTRPARVITSTTIKPLGVGARNVDRGQLQDITNDPDRVLVVQDFTGLRTLEKNVQLILEE
LPIPTTESPVPLGPDGKKQADIVFLLDGSINLGRDNFQEVLQFVYSVVDAIYRDGDSIQV
GLAQYNSDVTDEFFLKDYTTKPQILDAINKVIYKGGRVANTGAAIKHIQANHFVKEAGSR
IDQRVPQIAFIVTGGKSADDGASASLGIVQKGVKVFAVGVKNIDLTEVTSLASDSATSFR
VSTPQELSELNEQVLVTLEAAMQEKLCLGPTDTPRDCDLDVIVGFDVTDVGPGQNIFNSQ
RGLESRVESVLNRITQMQKISCTGNQAPNVRVAIMAQAQGGPLEGLDFSEYQPELFERFQ
GMRTRGPYFLTGDTLRSYLNKFRSAPSGSTKVIIHFTDGADDSIDQLEAASSALRTGGVN
ALIFVGLDRVSNFDKVMQLEFGRGFTYNRPLRVNLMDLDFELAEQLDNIAERTCCKVPCK
CSGQRGDRGVPGPIGPKGATGDLGYGGYPGDEGGPGERGPPGVNGTQGFQGCPGHRGTKG
SRGFPGEKGELGEMGLDGIDGEEGDKGLPGSSGEKGYAGRRGDKGVKGERGERGDRGLRG
DPGDSGADNTQRGSRGQKGEIGPMGEPGPEGLEGQGGGVGRKGMTGRRGLIGVKGTKGAL
GQPGPAGEQGMRGPEGPRGEIGTPGLRGEQGIPGPRGSGGLPGTTGERGRIGPPGQKGEP
GNPGPKGTNGLRGPRGEMGDDGQDGIGIPGPKGRKGERGFIGYSGPKGGPGDRGSAGGPG
PKGNRGRRGNAGDPGTSGQKGEVGYPGPSGLKGDKGESRDQCALVRNIKDKCPCCYGPKE
CPVFPTELAFAIDTSSGVVRDVFNRMKQTVLQVVNNLTIAESNCPRGARVALVTYNNEVT
TEIRFADSRKKSSLLQQIQNFQATLTTKPRSLETAMSFVARNTFKRARSGFLMRKVAVFF
SNGDTRASPQLNDAVLKLYDAGVMPVFLTSRQDPVLSRALEINNTAVGHAIVLPASGSQL
NDAIRRLLTCHICLDVCDPDPICGSPRPVFRDKRAAPTDVDTDIAFIMDSSESTTPLQFN
EMKKYISHLVNNLEISSEPKASQHHARVAVLQQAPYEYETNSSFPPVKTEFSLTDYGSKE
KIINYLYNQMTQLQGTSAIGSAIEYTIAHIFESAPNPRDLKVIVLMMTGKVNKQELEHLQ
KVVIKAKCKGYFFVILGIGRKVNTKTIYSLASEPNDVFFKLIDKPGELHEEPLLRFGTLL
PSFIRSNFAFYLSPEIRKQCEELQSDQQAKSQSPGHTRHKAVYVAPNMTISQTLSASTTI
SASIKPVASTNTHTRTTTASTTAQTRTTDQTTASTVVQVNDTAQSAPSTAAHTKATGRST
ASNAATTGGGRRRQGAKTHDIQITDVTENSARLRWASPEPHNAYTFDITVTLAHDHSLVQ
KQNLTGTEHVIRGLRSGQKYLVFITGYQKSQPKVIYTGTFSTKTPAQTKVSLANMMLNAE
PLEGPESVTDICRLQKDEGTCRDFELKWYYDPETKSCARFWYGGCGGNENRFNTQKECEK
VCVPGNINPSMVMTIGT
NT seq
9414 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaacacagacatttgcccctcgtggcaatattttgcctcctactctcaggcttt
tgttcggtttgggcccagcagcaagcagctgtcaaaaccgttgccgtggctgatataata
tttctagtggattcctcttggagcattgggaaagaacatttccaactcattcgagagttt
ctgtatgatgttgtaaaagctttagatgtgggaggaaatgattttcgctttgccctggtc
cagttcagcggaaacccccacacagagttccagttaaatacctacccctctaccaaagac
gtcctgtcccatattgccaacatgccttacatggggggagacaccaagactggaaaagga
ttagagtacctaatcgagaatcatctgactaaagctgctggaagcagagccagtgaaggc
gttccccaggttattatagtgttaacggacggacaatcccaggatgatgtggctctgcca
tcatctgtccttaaatcggcccatgtaaacatgtttgcggtcggcgtgcaggatgcagtg
gaaggggagttaaaggaaatagcaagcgaacccttcgatatgcaccttttcaacctagag
aattttaccgctctccatggcatagttggagacttagtgatgagtgtccgttcatccatg
actccagaaaaggctggggccacaggactggttaaagacatcacagctcaagagtccgct
gaccttattttccttattgatggatcaaacaacatcggaagtgtcaattttcaagccata
cgtgatttccttgtaaatttgattgaaagcctcagagttggagctcagcaaatacgcatt
ggggtggtgcagtatagcgatcaacccagaaccgagttcgctttgaacagctactccaca
aaagcggatgttctggatgccgtgaaggcacttagtttccgcgggggcgaggaagcgaac
accggtgcagcactggagtttgtggtggagaacctcttcacccaggcaggaggcagcagg
atagaggaagcggtgcctcagattttagtgctgataagtggtggagagtctagtgacgat
atccgagagggcttgttagcggtgaagcaagctagtatattttcgtttagcattggggtc
ctgaatgctgacagtgcagagctgcagcagattgccactgatggaaccttcgcatttact
gccctggatatccataaccttgatggtcttcaagaattattactgcccaacattgttgga
gtggcccaaagactcattttgttagaggccccaaccattgtgactgaagttattgaagtg
aacaagaaggatgtagtcttcctgatagatggctcaacggctttgggcactgcccccttt
aatgcaattcgtgattttgttgccaaaattgtccaaaggctggaggttggacctgacctg
atccaagtcgcggtggcacagtacgcagacactgtgaagccagagttttattttaacacc
caccagaccagaaaggatgtgatgtctaacgtgaagagaatgaagcctatgggtggtacg
gcactcaacactggctcagcactggattttgtgaggaacaacttcttcaccagtgctgct
gggtgcaggatagcggaaggggtgctccccatgctggtgctcatcactggcggtaagtcc
agggatgctgttgaccaagctgcggcagagatgaaaaggaaccggatagtgatccttgcc
attgggtcgaaaaatgccgacctggcagaacttcaagaaattgcccatgagagagatttt
gtgttcaacccaaatgacttccgccttcagttcatgcaagccattcttcctgaagtgctg
tcgcctattcggactctctctggagcaacgattgtccaagaaccaccatcagttcaagta
accaaaagggatatcatctttcttttggatggatcactcaacgtcggaaatgccaacttc
ccctttgtgcgtgactttgttgccaccctagttaactaccttgatgtcggcagtgacaaa
atccgtgttggcttagtccaatttagtgacacgcctaaaaccgagttctttctatactcg
taccaaaccaaatcagacataattcaacgcatggggcagctgaggcccaagggggggtca
gtgttgaacactggctctgcactgaactttgtgctttcaaatcacttcacggaagctggt
gggagcagaataaatgaccaagtgccacaggtcctagtcctggtgatggcagggaagtct
gccgatcccttcttgcaagtttccaatgaattagctcgggccggagtgctgacttttgct
gttggagttaggagtgcggataaggcagaacttgaacagattgcctttaatccaagaatg
gtatattttatggatgatttcagtgctctgacagctttaccccaggagttaaataagcct
ataacaacatatgttagtggaggtgtggaggaggttccactcgccccaacagaaagcaag
aaagatattttattcctgattgatggctcagccaaccttttgggtagctttcctgccgtc
cgggactttgtacacaaaatcatttctgacctgaatgtgggtcctgatgccacacgagta
gctgtagctcaattcagtgacaccatccaagttgagtttgactttcatgaactcccatct
aagcaagacatgcttctcaaagtgaaaagaatgaagataaaaactgggaagcaactgaac
attggagctgcacttgatgaaactataaggaggctgtttgtgaaggaagctggaagcagg
atcgaagaaggggttcctcagtttttggtcctccttgctgctgggagatcaactgatgat
gtggagcaaccatcagatgctctgaagcaagctggagttgtaacctttgctatcaaagcc
aagaatgccgaccctgtagagctggaaaggattgtttacgccccgcaattcattctgaat
gttgactccctctctcggatttcagagcttcaaccaaacatagtcaacctgttgacaact
atccagcttcagccaacagtagttgagagaagtgagaagaaggatgtggtgtttctaatt
gatggctcggatagtgtcagaagaggcttcccactactgaagaactttgtccaaagagtt
gttgaaagcttggatattggccgtgacaaggtccgtgtcgccgtcgcacagtacagccgc
tccatacagcctgagttcttactcgacacccatgaagacaaagcagatctcatcagcgcc
atccaggagctgaagattatgggaggatctcctctgaacactggagcagcccttgactat
ctcatcaagaacgtgttcacagtgtcgagcggcagcaggatagcagagggcgtcccacag
ttcctgattctgctgaccgctgaccgatcccaggacgatgtgaggaggccctcggtggtc
ctaaaaacgagtggcacagtgccctttggcattgggattggaaatgccgacctcacagag
ctgcagacgatttccttcctcccagattttgccatctctgttcctgacttcagccagctg
gataccgtgcagcaggtcatctcgaacagagtcatccagctgaccaagaaagagatagag
tcacttgcccctgatctggtttttacatcacccagcccagcgggtgtgaagagagatgtc
gtgttcatggttgatggctcccgttatgctgcccaggagttctacctcattcgcgatctc
attgagagaatagtgaacaacctggatgtgggctttgacaccaccaggatttcagtggtc
cagttcagtgagcatccccacgtggaattcctgctcaatgcccactccaccaaggatgag
gtgcagagtgccgtgagacagctgcggccgcagggtggccagcaggtgaacctgggggag
gcccttgagtttgtggcaaagaccatcttcacccgtccctctggaagccgcatagaggag
ggtgtccctcagtttttgattgtcctctcctcccgcaagtctgacgatgacttagagtac
ccatcacagcaagtcaaacaagttggggtggcacctatggtggtagcgaagaatgtggaa
cctgaggagatggtacagatttcccttagtcctgattatgtatttcaagtctccagcttc
caagaactgcccagccttgagcagaagctcctgactcctattgaaaccttgactggggac
caaatcagacggctgctgggagatgtgcaacccccggacgatgcctctggtgatgaaaag
gacatagtcttcctcattgacagctctgacggcgttaggcctgatggacttgctcacatt
cgggatttcatcagcagaattgttcagcagctggacgttgggccaaacaaagtgcgaatt
ggtgtggtgcagttcagcaataacatcttccacgagttctacctgaagacccacaagtcc
aaaaacgctgtcctgcaagccatccgccgcatgaggcatagaggggggtcccctgtgaat
gctggaaaagccctagactatgtggtgaagaactacttcatcaagtccgcggggagcagg
atagaagatggagtgccccagcatctagtcgtcatcctcggagaccggtcccaggatgac
gtgaccaggcctgctagagtcatcacttcaacgactattaaacctctaggtgtcggagcc
aggaatgtggacaggggccagctgcaggacattaccaatgatcctgaccgtgtgcttgtg
gtacaggacttcacaggactccgaactttagaaaagaacgtgcagcttattcttgaagag
cttccgatacctacaacagaatcccctgtacctttaggacctgatggtaagaagcaggct
gacatagtgtttttgctggatggctccatcaatctggggagagataacttccaagaagtt
ctccagtttgtctactctgtggtggatgccatttatagggatggtgactctatccaggta
ggactggcccagtacaactcagatgtgaccgatgagtttttccttaaggactacaccacc
aagcctcagattttagatgccatcaacaaagtcatctacaagggtggccgagtggcaaac
actggggcagccatcaagcatatccaggcaaatcactttgtgaaggaggctggcagccga
attgaccaaagagtgccgcagattgccttcatcgtcacaggcgggaagtctgcagatgat
ggggcaagtgcctccttgggaattgtgcagaaaggtgtcaaggtatttgcggttggcgtg
aaaaacatcgacctgacggaagtcaccagcctagccagtgacagtgccacgagtttcaga
gtatccacaccccaggagctgtcagagctgaatgaacaggtcctggttacgctggaagct
gctatgcaggagaaattgtgcctaggaccgacagacactccgagagattgtgacttagat
gtgatagttggcttcgatgtcacagacgttgggcctggccaaaatatattcaattcccag
agaggtctggagtccagagttgagtccgtgctgaacagaataacacagatgcagaagatc
agctgcaccggcaaccaggcacccaacgtcagggtagccatcatggcccaggctcaaggg
ggacctctggagggtcttgacttctccgagtaccagcctgagctcttcgagaggtttcag
ggcatgcgcacccgcgggccctatttcctcacgggggatacgctgaggtcctacctgaac
aaattcagatctgcaccctctggcagcaccaaggtcataatccactttactgatggtgca
gatgactcaatagatcagctggaggctgcttcatctgctttgcgtacaggaggtgtcaat
gctctcatcttcgtcgggctggaccgagtgagcaattttgacaaagtgatgcagctggaa
tttggtcgtgggttcacctataacagaccgctcagagttaatctgatggacttggatttc
gagctggcagaacagctcgataacatcgcagagaggacatgctgcaaggtcccatgcaag
tgttcagggcagagaggggacagaggtgtgccaggccccataggaccaaagggtgccacg
ggtgatcttggctatggaggctaccctggtgatgaaggaggaccgggtgagcgtggacct
ccaggtgtgaacgggacacagggtttccagggatgccctgggcacagaggaaccaagggt
tctcggggattcccaggagagaagggtgaactgggagaaatgggtctggatggcattgat
ggagaggagggagacaaggggttgcctggctcctctggagagaagggatatgctggcagg
aggggtgataagggagttaagggcgaacgaggagaacgaggtgaccgagggctccgtggg
gacccgggagattcaggagctgataatactcaacggggatccaggggccaaaagggtgaa
attggaccaatgggagagccaggaccagaggggctagagggccaaggaggtggagtcggg
aggaagggtatgacaggacgacggggactgataggagttaagggtaccaaaggcgcgctc
ggtcaaccagggccagctggagaacaaggcatgagagggccagagggtccacgcggtgag
attggcacgccaggactaagaggagagcagggcattccgggacccaggggttctggtggg
ctaccaggaaccacaggagagcggggcaggattggccctccaggacaaaagggtgagcct
ggaaaccctggacccaaagggacaaatggactacggggcccacgaggagagatgggtgat
gatggacaagatggaattggtatcccaggtcctaaaggcagaaagggagaacgtggcttc
ataggctactcagggcccaagggtggacctggtgaccgtggtagtgctggaggccctggc
cctaaaggaaacagaggccgcagaggaaatgcaggagatcctgggacatctggtcagaaa
ggagaggttggatatcctggaccatctggacttaaaggtgataaaggagaatccagagat
caatgtgcacttgtgaggaacatcaaagacaaatgcccttgctgttacggtcccaaggag
tgccctgtcttcccaactgagctggcctttgctattgacacctcctcgggcgttgtgagg
gatgttttcaacaggatgaagcaaaccgtgctccaggtggtcaacaacttaaccatcgct
gagagcaactgtcctcggggtgcccgggtggctctagtcacctacaacaatgaggtcacc
acagagatccgttttgctgactccaggaagaaatcaagcctcctccagcagatacaaaac
ttccaggcaaccctgaccaccaagccacgcagtctggagaccgccatgtcttttgtggcc
aggaataccttcaagcgtgcccgaagcggctttcttatgaggaaggtggctgtctttttc
agcaatggggacacaagagcctccccacagctcaacgatgccgtgctgaaactctacgat
gccggggtcatgcctgtgttcctcaccagcaggcaggacccggttctcagcagagctctg
gagatcaacaacacagcagttggacatgcaattgttcttccagccagcggcagtcagctg
aatgatgctatccggaggctcttgacttgtcacatttgtttggatgtgtgtgaccctgat
cccatctgtggtagtccgaggcctgtattcagagacaaaagggcagccccaacagatgta
gacactgacatagccttcatcatggatagctcagagtccaccactcctctgcagttcaac
gagatgaagaagtacatttcccacctcgtaaataacctggaaatcagctctgagccaaaa
gcatctcagcaccatgcaagagtggcagttctccagcaagctccttacgaatacgaaacc
aactcaagcttcccaccagtaaaaactgagttttcactaactgattatggctccaaagaa
aagatcattaactacctttacaaccaaatgacccagctccagggcacgagcgctatagga
agtgcaattgaatacacaatagctcatattttcgaaagtgcaccaaaccctcgggatctg
aaagtcatagttctgatgatgaccggaaaagtgaataaacaagaacttgagcacctgcag
aaggttgttatcaaagcaaaatgcaaagggtacttctttgtcatcttgggcattggcagg
aaggtgaataccaagactatttatagcctagctagtgagccaaatgatgtgttcttcaaa
ttgatcgataaaccaggagagcttcatgaggagcccttgctacgctttgggacactgctg
ccatctttcatcagaagcaactttgctttctacctgtctccagagataaggaaacagtgt
gaggagttgcagagtgatcagcaagccaagagccagagccctgggcacaccaggcacaaa
gcagtgtatgtggcacccaacatgaccataagccagaccctcagtgctagcaccacgatc
agtgcaagtatcaagcctgttgcaagcaccaacacccataccagaaccaccactgccagc
accacagcacagacgagaaccaccgatcagaccacagccagcaccgtggttcaggtgaat
gacactgcgcagagcgcgccaagcactgctgcccacaccaaagccactggccgcagcact
gcgagcaacgcggccaccacaggaggtggcaggagaagacaaggagcaaagacccacgac
atccagatcacagatgtcaccgagaacagcgccaggctgcgctgggccagccccgagcca
cacaatgcctacacctttgatatcaccgtcactttagcacatgaccactctcttgtgcag
aagcaaaacctgacgggcactgagcacgtcatccgaggactcagaagtgggcagaaatac
cttgtcttcattactggctaccagaaatcccaacccaaagtgatctatacagggacattc
agcacaaagaccccggcacagaccaaggtatccctggccaacatgatgctcaacgccgag
ccgctggaagggcccgagagtgtcacggatatctgccggctgcaaaaagatgaggggacc
tgcagggactttgagctgaaatggtactacgaccccgagaccaagagctgcgcccggttc
tggtacggcggctgcggaggcaacgagaacagatttaacacacagaaagaatgtgaaaaa
gtttgtgtccctggtaacatcaaccccagcatggtgatgacgataggaacatag
DBGET
integrated database retrieval system
