Buceros rhinoceros silvestris (rhinoceros hornbill): 104497403
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Entry
104497403 CDS
T08612
Symbol
CCDC88A
Name
(RefSeq) girdin isoform X1
KO
K25392
girdin
Organism
brhi
Buceros rhinoceros silvestris (rhinoceros hornbill)
Brite
KEGG Orthology (KO) [BR:
brhi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
brhi03037
]
104497403 (CCDC88A)
Cilium and associated proteins [BR:
brhi03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
104497403 (CCDC88A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HOOK_N
APG6_N
HOOK
GAS
KASH_CCD
Motif
Other DBs
NCBI-GeneID:
104497403
NCBI-ProteinID:
XP_010138951
LinkDB
All DBs
Position
Unknown
AA seq
1884 aa
AA seq
DB search
MENEIFTPLLEQFMSSPLVTWVKTFGPLAGGNGTNLEEYVALVDGVFLNEVMLQINPKSA
NQRINKKVNNDASLRIQNLSILVKQIKTYYQENLQQLIMMSLPNVLTIGKNPFSEPGTEE
VKKLLLLLLGCAVQCQKKEEFIERIQGLDFDIRAAVAAHIQEVTHNQDNVFDLQWMDVVV
LTQEYVEPLLKNMVLHLKRLIDERDEHSETIVELSEERDCLRFLPHASAAQSPCGSPGMK
RTESRQHLSVELADAKAKIRRLRQELEEKSEQLLDCKQELEQMEAELKRLQQENMNLLSD
ARSARVYRDELDALREKAIRVDKLESEVSRYKERLHDIEFYKARVEELKEDNQVLLETKT
MLEDQLEGTRARSDKLHELEKENLQLKAKLHDMEMERDMDRKKIEELMEENMTLEMAQKQ
SMDESLHLGWELEQMNRTTELSEVPQKSLGHEVNELTSSRLLKLEMENQSLLKTVEELQS
AVGSVEGSSSRILKMEKENQRLSKKLEELENEVSQEKQSLQNSQNLSKDLMKEKAQLEKT
LEALRENSERQIKLLEQENEHLNQTVASLRQRSQISAEARMKEIEKENKILHESIKETSS
KLNKMEFEKKQVRKELERYKERGDRAEELENELHHLEKENELLQKKITNLNITCEKIQAL
EQENSDLEVENRKLKKTLDSLKNLTFQLESLEKENSQLDEENLELRRTIESLKCTSIKVA
QLQLENKELESEKEQLKKSLELMKASFKKTERLEVSYQGLDTENQRLQKALENSNKKIQQ
LESELQDLESENQTLQKNLEELKISSKRLEQLEKENKLLEQETSQLEKDKKQLEKENKRL
RQQAEIKDSTLEENNVKISNLEKENKSLFKEIVVYKESCVRLKELEKENKELVKRATIDK
KTLVTLREDLVNEKLKTQQMNNDLEKLAHELEKIGLNKERLLHDEQSSDDRYKLLESKLE
STLKKSLEIKEEKIAALEARLEESTNLNQQLRQELKTVKKNYEALKQRQEEERMVQNSPP
RSGEDNQSVNKWEKENQETTRELLKVKDRLIEVERNNATLQAEKQALKTQLKQLETQNSN
LQAQILALQRQTVSLQEQNTTLQTQNAKLQVENSTLNSQSTSLMNQNAQLLIQQSALENE
NECVLKEREDLKSLYDALLKDHEKLEQLHERQASEYESLIAKHGSLKSAHKNLEVEHKDL
EDRYNQLLKQKVQLEELEKVLKVEQEKMLQQNEKHETVAAEYKKLHDENERLTHTYSQLL
RENEVLQTDHKNLKTLLNNSKLEQTRLEAEFSKLKEQYQQLDITSTKLNNQCELLSQLKG
NLEEENRHLLDQIQTLMLQNRTLLEQNMESKDLFHVEQRQYIDKLNELRRQKEKLEEKIM
DQYKFYEPSPPRRRGNWITLKMRKLIKSKKDVNRERLKPVTLTPTRSESSEGFLQLPHQD
SQDSSSVGSNSLEDGQTLGTKKSSMVALKRLPFLRNRPKEKDKVKAFYRRSMSMNDLLQS
MVLAGGQWAGSSEHLEGPDDISTGKRRKELGAMAFSTTAINFAAVNSSTGFRPKQLLNNK
DTTSFEDVSPQGISDDSSTGSRVHASRPASLDSGRTSTSNSNNNASLHEVKAGAVHSQSR
PQSHSSGEFSLLHEPEAWSSSSSSPIQYLKGHTRSSPVPQQRTPDTLESRGKQIKPGSPG
SEVVTLQQFLEESNKSTSSEMKSASEENLLDEVMRSLSESAELTGREKLRKQPSAGCGIV
RSLSVKNTVDFSDGRSIKPDQLVRPSLRKTEDTYFTSSPIKFTSGTQGRARSVKEKIQAT
VSQRQSRDCNPYATLPRASSVISTAEGTTRRTSIHDFLSKDSRQPVSVDPAPPSADRSVP
PASNVEAIPESRNSKSRSREQQSS
NT seq
5655 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgaaatattcacgccgcttctggagcagttcatgtctagccctcttgtcacc
tgggttaagacatttggaccgttagctggaggaaatgggaccaacctggaagaatatgtg
gcgctagtggatggtgtgtttctgaacgaagtcatgctgcaaattaatccaaagtctgct
aatcagaggataaacaaaaaagtgaacaatgatgcatcattaaggattcaaaatttgtct
attttggtgaaacaaataaaaacttattatcaggagaatttgcagcagttgatcatgatg
tctttgccaaatgtattaacaattggcaaaaatcctttttctgagccaggtaccgaagaa
gtaaaaaaactcctcctgcttttacttggttgtgcagttcagtgtcagaaaaaagaagaa
tttattgaaagaatccaaggtctggattttgacataagagcagctgttgcagcccatatt
caagaggtaactcataatcaggataacgtgtttgatctgcagtggatggatgtcgttgta
ttgacgcaagagtatgttgaacctctcttgaaaaatatggtgttacatttaaaaaggctt
atagatgaaagagatgagcactcggagactattgtagaactctcagaagaacgagactgt
ctccgttttctacctcacgcatcggcagcacaatcaccttgtggatctcctggcatgaag
cgcaccgaaagcagacagcacctgtcagtagagctagcagatgccaaagcaaagataaga
aggcttaggcaagagctagaggaaaagagtgagcagttgcttgactgtaaacaagaactt
gaacagatggaagctgaactaaagagacttcagcaagagaatatgaatttactctcagat
gcccgttccgcccgagtgtacagagatgaattagacgctctccgtgagaaggcaattcga
gttgacaagcttgaaagtgaagtcagccggtataaagagaggctgcatgatattgagttc
tacaaagctagagtggaggagttaaaggaagacaatcaagtgttgctagaaacaaagaca
atgttggaagatcaattagaggggacccgagcccgttctgacaaattacacgagttagaa
aaagagaatctacaattaaaagctaaattacatgacatggagatggagcgtgatatggat
agaaagaagattgaggaactcatggaggaaaacatgactttagaaatggcgcagaagcaa
agtatggatgaatcattgcatctgggctgggagcttgagcagatgaataggactacggaa
ctttctgaagtgccacagaaatcacttggtcatgaagtgaatgaactgacatcaagcaga
ttactgaagctggaaatggaaaaccaaagtttgctgaagacggtggaagaactacaaagt
gcagtgggttctgtagaaggcagtagttcaaggatcctgaaaatggagaaagaaaaccaa
agacttagcaaaaagcttgaagagctagagaatgaagttagccaagagaaacagagtctt
cagaacagtcaaaacttgagtaaagatttgatgaaagaaaaagcacagctggaaaagaca
cttgaagcacttcgagaaaactcagagcgacaaatcaagctattagaacaagaaaatgaa
catttgaatcaaactgtagcttctctaagacaacgctcacaaatcagcgctgaagcgaga
atgaaagaaatcgaaaaagaaaataaaatccttcatgagtctattaaagagaccagcagt
aagttaaataagatggaatttgaaaaaaaacaagtcaggaaagaactggaacgctacaaa
gagagaggggacagagcagaggaactcgagaacgagctgcatcatctggagaaggagaat
gaattattacagaaaaaaattactaacttaaacattacttgtgagaagatacaggcctta
gaacaagaaaactcagacctggaagtggaaaacagaaaactgaaaaaaactttggatagc
ttaaaaaacctcacttttcagttagaatccttagaaaaggagaactcgcagcttgatgaa
gaaaatttagaattgagaagaacaattgaatccttgaagtgtacgagcattaaagtggca
cagttacagttagaaaataaggaactggagagtgaaaaggagcagcttaagaaaagcctt
gaactcatgaaagcctcatttaagaaaaccgaacgcttggaagtcagctaccaaggcctg
gacacagagaaccaaaggctacagaaagccctcgagaacagcaacaagaagattcagcaa
ttagaaagtgaactccaagatttagagtctgaaaatcagaccctgcaaaagaacttagaa
gagttaaaaatctctagtaagcgcctagagcaattggaaaaggagaataaattgttggaa
caagagacttctcaactggaaaaagataagaaacagctcgaaaaagaaaataaaaggctt
cgacaacaagcggaaattaaagatagtactttagaagaaaacaacgtgaaaatcagtaat
ctggaaaaggaaaacaaatctctgtttaaagaaatagttgtatataaagagtcatgcgtg
cgcctgaaagaactagaaaaagaaaataaagaactcgtgaaaagagcgaccattgataag
aaaacccttgtcaccttacgagaggacttggtgaatgaaaagttgaagacccagcaaatg
aacaatgatctagaaaaacttgcccacgaacttgaaaagataggcttaaacaaggagcgt
ctcttgcacgacgaacagagcagtgatgacaggtacaagcttttggagtcaaaattagaa
tccacgcttaagaagtctctcgaaataaaagaagaaaaaattgctgctttggaggctcgt
ttagaagaatcaacaaatttgaaccagcagctccgtcaggaacttaaaacagtgaaaaag
aactatgaagctctcaagcaaagacaagaagaggagaggatggttcagaattctcctccc
agaagtggagaagacaatcaatctgtcaataagtgggagaaagaaaatcaggaaactact
agagaattattgaaagttaaagatagattaatcgaagtggagaggaataatgctacactg
caggcagagaagcaagcgctaaagacacagttaaagcaacttgagacacagaacagcaat
ctgcaggctcagattctcgcacttcagagacagaccgtttctctgcaggaacaaaataca
actctacaaacccagaatgccaagctgcaggttgaaaattccacccttaattctcaaagc
acatctcttatgaatcagaacgcccagctgctgatccagcagtctgctttagaaaatgaa
aacgagtgtgtgctcaaggaacgcgaggatctgaagtcattgtatgatgcgcttctcaaa
gatcatgaaaaactggagcaactgcatgaacgccaggcttccgagtatgaatctctgatt
gccaagcatggaagtctgaaatctgcgcacaaaaatctggaggtggagcacaaggactta
gaagataggtacaatcagttgctgaaacagaaagtccagctggaagagctggagaaagta
ctcaaggtggaacaggagaaaatgctgcagcaaaatgaaaaacatgaaaccgtagcagca
gagtataaaaaacttcacgatgaaaatgaaaggcttactcacacgtacagtcagctcttg
agagagaatgaagttctccaaactgatcacaagaatttgaaaacattgttgaacaattcc
aaactagaacagacacggttagaagctgagttttctaaactcaaagaacagtaccaacaa
ctggacattacgtcgacaaaactgaataatcagtgcgagctgcttagccaacttaaagga
aatctggaggaggaaaacagacatctcctagatcaaatccagacgctaatgctgcagaat
agaacgttacttgagcagaacatggaaagcaaggacctcttccatgtagagcaaaggcag
tacattgacaagctgaatgaattaaggcgacagaaggagaaattggaggagaagataatg
gatcagtataaattttatgagccatctccgccaagaaggaggggcaactggattactctg
aaaatgaggaagctgataaaatctaagaaggatgttaatcgcgaacgtttgaagccggtg
acccttacgcctacccgttcagagtccagtgaagggtttcttcagctgccccaccaggac
agtcaggatagttcctctgtgggctccaactctcttgaagatggccagaccttggggacc
aaaaagagtagcatggttgcactgaaaagactgccctttttgaggaacagaccgaaggaa
aaagacaaagtgaaggccttctaccgtcgctccatgtccatgaatgacctgttgcagtcc
atggtcctagcgggaggacaatgggcaggtagttctgagcatctggagggccctgatgat
atatccacgggtaaaaggaggaaggagttgggagctatggccttctccactacagctatc
aactttgcagctgtcaactcttctacaggcttcagacccaagcagttgctaaataataaa
gatacaacatcctttgaagatgtaagtccgcaaggtattagtgatgattctagtacagga
tccagagttcatgcttccagaccagccagccttgatagtggcagaacatccactagcaat
agcaataacaatgcttcactccatgaagtcaaagcaggtgcagttcacagtcaaagcagg
ccgcagagtcacagcagcggggagttcagcctgctccacgagcctgaggcttggtctagc
agcagcagcagccctatccagtacctgaaaggtcatacaaggtccagtccggtgccgcag
caaaggacaccggacacactggagagtcgcggaaaacagatcaaacccggctctcctggc
agtgaagttgttaccctgcagcagtttttagaagaaagcaacaagagtacctcaagtgag
atgaaatctgcaagtgaagagaatcttttagatgaagtcatgagaagcttatctgagtcg
gcagagctgacgggaagggaaaagctgaggaaacagccgtctgctggctgtggtatcgtg
agatcgttaagcgtaaaaaacacagttgatttctcagatggacgatccattaagccagat
cagcttgtaaggcccagccttcgtaaaactgaagatacctacttcactagctctcccata
aaattcacatcaggcactcaggggagagccagatcggttaaagagaagatacaagctact
gtatcccagcgacaatcaagagattgcaatccctacgctaccttacctcgagccagcagc
gtgatttctacggcagaaggaactactcgaaggacgagcattcacgattttttgtctaag
gacagtaggcagcccgtgtcagtggatccagcaccaccctccgctgacaggagcgttccg
ccagcctctaatgtggaagctatcccagaaagcagaaattcaaaaagcaggtctagggag
caacaaagctcctaa
DBGET
integrated database retrieval system
