Buceros rhinoceros silvestris (rhinoceros hornbill): 104497461
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Entry
104497461 CDS
T08612
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
brhi
Buceros rhinoceros silvestris (rhinoceros hornbill)
Pathway
brhi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
brhi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
104497461 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brhi03400
]
104497461 (MSH2)
DNA repair and recombination proteins [BR:
brhi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
104497461 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
DUF6437
Motif
Other DBs
NCBI-GeneID:
104497461
NCBI-ProteinID:
XP_010139015
LinkDB
All DBs
Position
Unknown
AA seq
950 aa
AA seq
DB search
VAVYLLAGPGPQKPAAPLVELRGKAVTPTAVRVLTSVGREMLRGLWILMSALMHRGLEAS
TTEFSITECKSSSASRSFGMMTSRSENGSKKIVSVVLSKMNFESFVRDLLLVRHYRVEVY
KNKAGSKSIKENDWYLAYKGSPGNLAQFEEVLFANNDMSTAIGVVGVKLSTADGQRVVGV
GYVDTTLRKLSVCEFPDNDQFSNLEALLVQLGPKECVLPGGETAGEMGKLREVIQRGGIL
ITDRKKADFTTKDIVQDLNRLLKSKKEEQMNSAALPEMEKQVAILSLSAIIKFLELLSDE
SNFGQFELTTFDLSQYMVLDNAAVQALNLFQSSVENANTAQSLAGLLNKCRTPQGQRLVN
QWIKQPLMDKSRIEERLNLVEAFVADPELRQCLQEDFLRRFPDLNRLAKKFQRQAANLQD
CYRMYQAINQLPNVVQALEKHEGAHQMLLLAVFITPLNDISSDFSKFVEMIETTLDMDKV
ENHEFLVKASFDPNLTELREKMNELEEQMQSLLKSAARELGLEAGKSIKLETNSQFGHHF
RITCKEEKVLRNNSKYGIVDTQKNGVKFTNSKLSSINDEYIKSREEYEEAQDAIVKEIIN
IASGYAEPIQMMNDVIAQLDAIVSFAHVSNGAPVPYVRPVILEKGQGRIVLKGARHPCIE
VQDEVAFIPNDITFEKGKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCDSAEIT
IVDCILARVGAGDSQLKGVSTFMAEMLETASILRTASENSLIIIDELGRGTSTYDGFGLA
WAISEYIASKICAFCMFATHFHELTALADQVPTVNNLHVTALTSDDTLTMLYRVKEGVCD
QSFGIHVAELAAFPKHVIESAREKALELEEFQNIGKSKESEGEPPAKKFCREREEGEKII
QDFLCRVKALPLTDMSEDDIKIKLKQLRNDVLVKNNSFVNEIISRTKVTS
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
gttgctgtgtacctgctggcgggccctgggccgcagaagcctgcagcacccctcgtagag
ctgagagggaaggcagtgacacccacggcggttcgtgtgctgacgagtgtgggacgggag
atgctaagaggtctctggattttaatgtccgctctgatgcatcgaggcttggaagcaagt
acaactgaattcagtataactgaatgcaaatcgtcttcagcctctcgcagctttggaatg
atgacgagtcgttctgagaacggaagcaagaagattgtcagtgtcgtgcttagtaaaatg
aactttgagtcttttgtgagagatctgcttctggttcgtcattacagagttgaagtttac
aagaacaaagcggggagcaaatctatcaaagaaaacgactggtatttagcctacaagggt
tctccaggaaatcttgcccagtttgaggaagttctgtttgccaacaatgatatgtcaacg
gccattggggttgtgggggttaagctgtctactgctgatggacaaagagtagtaggagtg
gggtatgtcgacactacgctgagaaaattgagtgtctgtgagtttccagataatgatcag
ttctcaaaccttgaagctctactggttcaactaggaccgaaggagtgtgtgctaccagga
ggagagactgcaggagaaatgggaaaactgcgagaagtcattcagagaggaggaatcctg
attacagacaggaagaaggcagatttcacaacaaaagatattgttcaggatctcaatcgc
ttgctaaaatcaaaaaaagaagaacaaatgaatagtgcagcattgccagagatggaaaag
caggtggctattttgtctttgtcggccattatcaagtttttagagttgctgtcagatgag
tctaattttggacaatttgaactgactacttttgatcttagtcagtatatggttctagat
aatgcagctgttcaagccctcaacctttttcagagttctgtggaaaatgctaacaccgca
cagtctctagcgggtttactaaacaaatgcagaaccccgcaaggacaaagactagttaat
cagtggatcaaacaaccacttatggacaagagtagaattgaagaaaggttgaatttggtg
gaagcttttgtggcagatccagaactacgtcagtgccttcaggaagatttcttacgtcgc
ttcccagatcttaaccggctggcaaagaaatttcagaggcaagcagcaaacttacaggac
tgttaccgaatgtatcaggctattaatcaactgcctaatgttgtacaagcactagaaaaa
catgaaggagctcaccagatgttgttgttggcagtgtttataacacctcttaacgatatt
tcctctgacttttcaaagtttgtggagatgatagaaacaacattggacatggataaggtg
gagaaccatgaatttcttgtcaaggcttcatttgatcctaatttgacagagttaagagag
aagatgaacgaactggaagaacaaatgcagtcccttttaaagagtgcagccagagaacta
ggcttggaagctggcaaaagtatcaaactggagacgaattcacagtttgggcatcacttc
cgaataacttgcaaggaggaaaaagtgctccgtaacaattcaaaatatggaatagtcgac
acgcagaagaatggtgtgaaatttactaacagcaaactgagctccatcaatgatgagtat
ataaagagcagagaagagtatgaagaggctcaagatgcaattgtgaaggaaatcattaac
attgcttcaggttatgcagaaccaatacagatgatgaatgatgtgatagctcagttagat
gcgattgtcagctttgctcatgtgtcaaatggagcaccagtgccgtatgtccgtcctgtc
attctggaaaagggacaaggaaggattgtgctgaaaggtgccaggcatccttgcatcgaa
gtgcaagatgaggtggctttcatccccaatgacattacatttgagaagggcaagcagatg
ttccacattattactggccctaacatgggggggaagtcaacatacatccggcagacaggg
gtgatcgtccttatggcccaaattgggtgttttgtgccgtgtgactctgcagaaataacc
attgtggattgtatcctggctcgggtgggagctggagacagtcagctgaaaggcgtgtcc
actttcatggctgaaatgttagaaactgcctctatccttaggacagcatctgaaaactcc
ctgataataattgatgagctgggaagaggaacttctacctatgatggctttggcttagcg
tgggctatttccgaatacattgctagcaaaatctgtgctttctgtatgtttgctacgcac
tttcatgaactgacagctctcgctgaccaagtgccaacagtaaataacctacacgttact
gctctgaccagtgatgacacactgacgatgctttatcgagtcaaggaaggtgtttgtgac
cagagttttggcatacacgtagcagagttggcagctttcccaaaacatgtgatagaaagc
gcaagagagaaagcattggagctggaggagtttcaaaacattggcaagtccaaggaatct
gaaggagaaccaccagccaagaaattctgcagagaaagagaggaaggtgaaaagataatt
caggattttctttgtcgagtgaaagcattgcccctgacagatatgtcagaagatgacatc
aaaatcaagctgaaacagctgaggaatgatgtgttggtgaagaacaacagttttgtgaat
gaaataatttcccgaacaaaagttacatcgtaa
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