Buceros rhinoceros silvestris (rhinoceros hornbill): 104498260
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Entry
104498260 CDS
T08612
Symbol
PRDM1
Name
(RefSeq) PR domain zinc finger protein 1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
brhi
Buceros rhinoceros silvestris (rhinoceros hornbill)
Brite
KEGG Orthology (KO) [BR:
brhi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
brhi03000
]
104498260 (PRDM1)
Transcription factors [BR:
brhi03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
104498260 (PRDM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
Zf-C2H2_ZNF451_C
zf-C2H2_6
zf-C2HE
zf-C2H2_15
C2CH-3rd_BIRD-IDD
Motif
Other DBs
NCBI-GeneID:
104498260
NCBI-ProteinID:
XP_010139919
LinkDB
All DBs
Position
Unknown
AA seq
728 aa
AA seq
DB search
VTGVISKEYIPKGTRFGPLVGEIYTSDTVPKNANRKYFWRIYSSGELHHFIDGFNEDKSN
WMRYVNPGYSVQEQNLAACQNGMNIYFYTIKPIPANQELLVWYCRDFAERLHYPSSRELT
MMNLTQTHVNPKQHSADKDELYQKSIPKKEHSVKEILKMESNPPKGKDFFQTNISPVTPE
KGLDDLRKNYSPERSFFPRVVYPIRPHIPEDYLKASLAYGMDRPSYITHSPIQTSTTPSP
SGRSSPDQSLKSSSPHSSPGVTVSPLAPTSQEHREPYSYLNGSYGSEGLGSYPGYAPPGH
LPPAFLPSYSPHYPKFLLPPFNMSCNNLSALNNINGINNFNLFPRMYPLYGNLLSGGSLS
HHMLNPTTLPSSLPSEGGRRLLQPDHPRDFLIPAPNSAFSITGAAASMKDKPCSPTSGSP
TAGTAASSEHIMQPKPTSAVLAATGGEEAMNLIKSKRNVTGYKTLPYPLKKQNGKIKYEC
NVCSKTFGQLSNLKVHLRVHSGERPFKCQTCNKGFTQLAHLQKHYLVHTGEKPHECQVCN
XRFSSPSNLKPLLRLHSGEKPYQCKLCPAKFTQFVHLKLHKRLHTRERPHKCIHCHKSYI
HLCSLQVHLKGNCPVAPASGLSMEDLNRINEEIEKFDISDNADKLEEVEDNIDLTSVVEK
DILTMLRREMEGANLKASLQRNLGNGLISSGCNLYESSDMSIMKLPHGHPLPLLPVKVKQ
ETVEPMDP
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
gtcactggagttataagcaaagagtacatcccgaaaggaacgcgctttggacccctggta
ggagagatctataccagcgatacggttcccaagaatgcgaacagaaaatacttttggcgg
atctattcaagtggtgagcttcaccacttcattgacggatttaacgaggacaagagcaac
tggatgcgttatgtaaaccctggctactctgttcaggaacagaatttggctgcttgtcag
aatggaatgaacatctacttctacaccatcaagcccatccctgccaaccaagagctgctt
gtgtggtactgccgagactttgcagagaggctgcactatccctcctccagagagctgaca
atgatgaacctcacacaaacccacgttaatccaaagcagcacagtgctgataaagatgag
ctctaccagaaaagcatcccaaagaaggagcacagtgtgaaagaaatcctgaaaatggaa
tccaatcctccaaaaggaaaagacttctttcagaccaacatttcaccagttactccagaa
aaaggcttggatgatttgcgtaagaactacagcccggagaggtctttcttccctcgagtt
gtctacccgatccgacctcacattccagaagactatctgaaagcttccctagcctatggg
atggacagacccagctacattactcactcgcccatccagacatctactacaccgagtcct
tccgggaggagcagcccagaccaaagtttaaaaagttcaagccctcacagcagtccaggg
gtcacggtttcgcccctggcgcctacttcccaagagcacagagaaccgtactcttacttg
aacggatcgtatggttcagaaggattggggtcttatcccggatacgcaccccctggccac
ctcccacctgcctttctaccgtcctatagcccccactatcccaaattcctgttacctcct
ttcaacatgagctgtaataacctgagtgctttgaacaatatcaatggcatcaacaatttc
aaccttttcccaaggatgtatcctctctatggcaacctgctcagcggaggtagcctttcc
catcacatgttgaaccccaccacgctccccagttcattgcccagtgaaggaggccgtcga
ctgctgcagcctgatcatccgagagacttcctcataccagcacctaacagtgccttctct
atcacgggcgctgctgccagcatgaaggacaagccatgcagccctaccagcgggtcaccc
acagctggtacagcagccagttcggaacacataatgcaacctaaacctacctcagcagtg
ctggctgccaccggtggtgaagaagccatgaatcttattaaaagtaagaggaatgtgact
ggttacaaaaccctcccatacccactgaagaagcagaatgggaagatcaagtacgaatgc
aatgtttgctccaagacctttggtcagctctccaatctgaaggtgcacctccgagtgcac
agcggagagagaccgtttaaatgccagacttgcaataaaggcttcacgcagctggctcac
ctccagaagcactatctggtacacacaggagaaaaaccccacgagtgtcaggtatgtaac
ncgcgtttcagcagccccagcaatctcaaacccctcctgcggctccactctggagagaag
ccttaccagtgcaagctctgcccggccaaatttacccagtttgtgcacctgaagctgcac
aagcgtctccacacccgggaacgtccccataaatgcatccactgccacaagagctacatt
cacctctgcagcctccaggtccacctgaagggcaactgccccgtcgcccctgcctctggc
ctctccatggaggacctgaatcgaatcaatgaggagatcgagaagtttgacatcagtgac
aatgccgacaagctggaagaagtggaggacaatatcgacttgacatcggttgtggagaag
gatatactgaccatgctcaggagggaaatggaaggagctaatctgaaagcatccctacag
aggaacctgggaaatggacttatctcctcaggatgcaacctttacgagtcgtcagatatg
tcaattatgaagttgcctcatggtcacccactacctctgttacctgtaaaggtcaagcaa
gaaacagttgaaccaatggacccttaa
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integrated database retrieval system
