Buceros rhinoceros silvestris (rhinoceros hornbill): 104498272
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Entry
104498272 CDS
T08612
Symbol
HMGB1
Name
(RefSeq) high mobility group protein B1
KO
K10802
high mobility group protein B1
Organism
brhi
Buceros rhinoceros silvestris (rhinoceros hornbill)
Pathway
brhi03410
Base excision repair
brhi04140
Autophagy - animal
brhi04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
brhi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
104498272 (HMGB1)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104498272 (HMGB1)
09143 Cell growth and death
04217 Necroptosis
104498272 (HMGB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
brhi03036
]
104498272 (HMGB1)
03400 DNA repair and recombination proteins [BR:
brhi03400
]
104498272 (HMGB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
brhi04147
]
104498272 (HMGB1)
Chromosome and associated proteins [BR:
brhi03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
104498272 (HMGB1)
DNA repair and recombination proteins [BR:
brhi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
104498272 (HMGB1)
MMR (mismatch excision repair)
Other MMR factors
104498272 (HMGB1)
Exosome [BR:
brhi04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
104498272 (HMGB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
RNA_pol_3_Rpc31
HMG_box_5
Motif
Other DBs
NCBI-GeneID:
104498272
NCBI-ProteinID:
XP_010139930
LinkDB
All DBs
Position
Unknown
AA seq
215 aa
AA seq
DB search
MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSSKEKGKF
EDMAKADKLRYEKEMKNYVPPKGETKKKFKDPNAPKRPPSAFFLFCSEFRPKIKGEHPGL
SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKVDAGKKVVAKAEK
SKKKKEEEEDEDEDEEDEDEEEEEEEEEEDDDDDE
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaggtgatcctaagaagccgagaggtaaaatgtcttcgtacgccttctttgtg
caaacctgccgggaggagcacaagaagaaacatccagatgcttcagtgaacttttcagag
ttctcaaaaaaatgctcagaacgatggaagactatgtcttctaaggaaaaagggaagttt
gaagatatggcaaaggctgacaagcttcgttatgaaaaagaaatgaaaaactatgtacca
cctaagggggaaacgaaaaagaagttcaaggatccaaatgcacccaagaggcctccttcg
gcttttttcttgttttgctctgagtttcgtccaaaaatcaaaggagaacaccctggtctg
tccatcggggatgtcgcaaagaaactgggagagatgtggaacaacaccgctgcagatgat
aaacagccttacgaaaaaaaggctgctaaactgaaggagaagtatgaaaaggatattgct
gcataccgggccaaagggaaggttgatgcaggcaaaaaagtagttgccaaggctgagaag
agcaagaagaagaaggaggaggaggaagatgaggatgaagatgaagaggatgaagatgag
gaagaggaggaagaggaggaggaggaagatgatgatgatgatgaataa
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integrated database retrieval system
