Buceros rhinoceros silvestris (rhinoceros hornbill): 104498281
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Entry
104498281 CDS
T08612
Symbol
IGHMBP2
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-binding protein SMUBP-2
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
brhi
Buceros rhinoceros silvestris (rhinoceros hornbill)
Brite
KEGG Orthology (KO) [BR:
brhi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
brhi03009
]
104498281 (IGHMBP2)
03012 Translation factors [BR:
brhi03012
]
104498281 (IGHMBP2)
Enzymes [BR:
brhi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
104498281 (IGHMBP2)
5.6.2.5 RNA 5'-3' helicase
104498281 (IGHMBP2)
Ribosome biogenesis [BR:
brhi03009
]
Eukaryotic type
Other ribosome biogenesis factors
104498281 (IGHMBP2)
Translation factors [BR:
brhi03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
104498281 (IGHMBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
R3H
AAA_30
AAA_19
zf-AN1
Helicase_RecD
ResIII
DEAD
SLFN-g3_helicase
nSTAND3
AAA_16
AAA_22
AAA_25
Flavi_DEAD
UvrD-helicase
IstB_IS21
ABC_tran
AAA
DnaB_C
DAP3
T2SSE
cobW
Herpes_ori_bp
Motif
Other DBs
NCBI-GeneID:
104498281
NCBI-ProteinID:
XP_010139939
LinkDB
All DBs
Position
Unknown
AA seq
968 aa
AA seq
DB search
AWQESSSLKELQRRGVCLLKLQAASQRTGLYGRLLVTFQPRKYDSDGELPCNSFGPGDIV
GLYDSAGQGDPLSTGIVTRVTSKAVTVAFEESRDGLPSLDRESSYRLLKLANDVTYNRLK
KALNALKQYRGGPASDLIDVLFFSSDPSAFSETKPLKLHNDSLDASQREAISFSLAQREL
AIIHGPPGTGKTTTLIEIILQAVQQGLKVLCCAPSNVAVDNLVERLAGSRARVLRLGHPA
RLLEPIQQHSLDAVLARGDNAQIVADIRKDIDQAFAKTKKAQDKGERSHFLGEIKALRKE
LKEREETAMAAALTHASVVLATNTGASSDGPLKLLPENHFDLVVIDECAQALEASCWIPL
LKAPKCILAGDHKQLPPTIISHKAAAEGLSLSLMERLIERYGEKVVKMLTVQYRMHQAIM
QWASTELYGGRLTAHPSVAQHLLRDLPGVTSTEETTIPLLLIDTAGCGLFELEVEDEQSK
GNPGEVQLAGLHIRALVDAGVKDKDIAVVAPYNLQVDMLREHLCHKYPELEIRSVDGFQG
REKEAVILSFVRSNRKGEVGFLAEERRVNXXXXXAVHTVAPAXGQPCLKRLVGYFSQHGE
VRSGFEYLDNLLPENYAQESRRERPQGEKLPAASGPKPQPPPGRKPKAAATKAACQKPEA
RSSPNTSGPGRESPGTTGGANRLKAMLEAFLESSEMQLDFPPSLNAHDRMLVHLMAEEWG
LQHASTGEGRDRYISVHKKEPAEPSPPAAAPPSKQLPLPQLPHPSEETPIPAEPGGSSKS
SGKVDLKTLHLERVEREKARREEAARKAQEPGASLQGSSRKKDKSEAKGKAAVKSGAADA
AGEDIDALISAAVKADTTCGFPRCKASVTTLGQLCLHCHRRYCLSHHVPEVHGCGEKAKA
HARQRISREGVLYPGSGSKDKSLDPAKRAHLQRRLDKKLSELTNQRKGKKKEKRSEGAAC
CCFDLEVT
NT seq
2906 nt
NT seq
+upstream
nt +downstream
nt
ggcatggcaggagagcagctccctgaaggagctgcagcgcagaggtgtctgcttgctcaa
gctccaagctgccagccagaggaccggcctctacgggcggctgctcgtgaccttccagcc
cagaaagtacgactcagatggcgagctgccctgtaacagttttgggcctggggacattgt
gggcctttacgattctgctggccagggtgatccgctctccaccggcattgtgacacgtgt
cacctccaaagctgtgactgtcgcctttgaggagtcacgagatggcctgccgagcttgga
ccgggagagctcctaccgcctgctgaaactggccaacgatgtcacctacaaccggctgaa
aaaagctttaaatgcgctgaagcagtatcgcggggggccagcctctgatctcatcgacgt
cctcttcttttcttctgatccaagcgcgttcagtgaaacaaagcctctgaagcttcacaa
cgactcactggatgcgtcacagagggaagccatctccttctcgctggcgcagagggagct
cgccatcatccatggaccacccggcacggggaagaccacgacactcatagagatcatcct
gcaagccgtgcagcaaggcctgaaagtcctgtgttgtgccccatccaacgtggctgtgga
caacctggtggagaggctggctggctccagagcccgcgtcctgcgcctcgggcaccccgc
tcgcctgctggagcccatccagcagcattccttggacgctgtcctggcccgcggcgacaa
cgcccagatagtggcagacatcaggaaggacatcgaccaggcctttgcaaaaaccaaaaa
ggctcaagacaagggagagcggagccattttctcggtgagattaaggcactgaggaagga
gctgaaggaacgagaagaaactgccatggctgcagccctgacccatgccagcgtggtcct
tgctacgaatacaggagcttcctcggacggacccctgaagctgctccccgaaaaccactt
cgatctggtggtgatagatgagtgcgctcaggccttggaagccagttgctggatccctct
gctgaaggctccaaagtgcatcctggccggggaccacaagcagctgccccccaccatcat
ctctcacaaggctgctgccgagggcctttccctcagcctgatggagcgtctcatcgagag
gtacggggagaaggtcgtgaagatgctgacggtgcagtaccgaatgcaccaggccatcat
gcagtgggcttccacagagctgtacggtggccggctcaccgctcacccctcggtcgccca
gcatttgctcagggacctgccaggcgtcacctctacagaagagaccacgattcccttact
gctcatagacactgctggctgtggcctgtttgagctggaggtggaagatgaacagtctaa
agggaatccaggggaggtgcagctggccgggctgcatatccgagccttggtggacgctgg
tgtgaaggacaaggacatcgccgtcgtagccccctacaacctccaggtggacatgctaag
agagcacctttgccacaagtacccagagctggaaattagatccgtggatggtttccaagg
cagagagaaagaggcggtgatcctgtcgttcgtcaggtccaacaggaaaggtgaggtggg
ctttcttgccgaagagcggcgggtaaacnnnnnnnnnnnnnnngcagtccacaccgtcgc
ccccgcctgaggccagccctgcctgaagcggctggtggggtacttcagccagcacgggga
ggtgcgctcaggcttcgagtacctcgacaacctcttgcccgaaaactacgctcaggagag
ccgccgtgagcggccccagggagagaagcttcctgcagcatctggccccaaaccacagcc
gcccccagggaggaaacccaaggcagcagcaaccaaagcagcgtgtcagaagccagaggc
gcgttcctccccgaacacaagtgggcctgggagagagagcccagggaccacaggcggtgc
caacaggctcaaggccatgctggaggccttcctggagagcagcgagatgcagctggattt
ccccccgtcccttaatgctcacgatcggatgctggttcaccttatggcggaggagtgggg
gctgcagcacgccagcactggggaagggagggaccggtacatcagtgtgcacaagaaaga
gcctgctgagccttcgccacccgcagccgcaccccccagcaagcagcttcctcttcctca
gctgccacatcccagtgaggaaactcccatccctgccgagccaggaggaagcagcaagag
ctcagggaaagtggacctgaaaaccctgcacctggagagagtagagagggagaaagccag
gcgggaagaggcagccaggaaggctcaggagcctggtgccagccttcagggcagcagcag
gaagaaggacaaaagcgaagccaaagggaaggcagcggtgaagagcggagcagccgatgc
agcaggagaagatatcgacgctctgatctctgccgccgttaaagctgacaccacatgtgg
tttcccccgctgcaaagccagcgtcacaaccctgggacagctttgcctccactgccaccg
gcgctactgcctcagccaccacgtcccagaggttcatggctgcggagagaaggccaaggc
ccacgcgcggcagaggatcagcagggaaggggttctctaccccgggagcggctccaagga
caagtccctggacccagccaagagagcccacctccagcggcgcctggacaagaagctcag
cgaactgaccaaccagagaaagggcaaaaagaaagagaagagaagtgaaggagctgcatg
ttgctgctttgaccttgaagtcacag
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