Buceros rhinoceros silvestris (rhinoceros hornbill): 104498501
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Entry
104498501 CDS
T08612
Symbol
COL4A6
Name
(RefSeq) collagen alpha-6(IV) chain
KO
K06237
collagen type IV alpha
Organism
brhi
Buceros rhinoceros silvestris (rhinoceros hornbill)
Pathway
brhi04510
Focal adhesion
brhi04512
ECM-receptor interaction
brhi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
brhi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104498501 (COL4A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104498501 (COL4A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104498501 (COL4A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
brhi04147
]
104498501 (COL4A6)
00536 Glycosaminoglycan binding proteins [BR:
brhi00536
]
104498501 (COL4A6)
Exosome [BR:
brhi04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
104498501 (COL4A6)
Glycosaminoglycan binding proteins [BR:
brhi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104498501 (COL4A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
104498501
NCBI-ProteinID:
XP_010140191
LinkDB
All DBs
Position
Unknown
AA seq
1726 aa
AA seq
DB search
MGLMLMTLLPVTETLVDMTKEVFLLCSYKDRAFDFLNHMERFGIMLLAFSDQGGKKTYSG
PCGGRDCSAGCKCLPEKGARGRPGPIGLQGPIGAPGFTGPEGLPGAKGERGAVGPPGPAG
QKGDKGPMGVPGFQGINGIPGHPGQSGPRGLPGLDGCNGTTGSPGVPGPDGFPGLPGLPG
RPGPKGLKGEPVFAQGSLKGMKGENGLPGLDGISGPKGFPGPVGSAGPIGLPGLQGPMGP
PGPPGPKGNMGLGFQGEKGEKGDVGLPGPPGPPPSTGILEFMGFPKGKQGEKGKLGPQGL
PGAKGLPGLPGFGGIGEKGEKGVPGLPGVRGLLGLDGSDGIPGRKGHPGVPGYPGLDGVE
GMKGELGDIGPPGPPIVIDGEGLVISGAQGDPGNPGIPGPPGEEGISGLPGLPGAPGFPG
LERDGMGPGGSPGIPGVKGEVGEPGRATIGLTGTRGREGLPGLPGAPGLPGSLRPSLPPD
TILNGRPGAPGEPGQRGLPGALGPKGYKGEVGDCACDGGVTRAGPKGISGPPGPSGSPGV
SGIKGIGGDPGTVGAPGLRGPPASSGQSGLPGPKGEKGDSLYATGKGALLDRGATAPRGP
SGIPGTPGRDGLPGLPGPPGPPGDGGLGFPGEKGLPGLPGSKGHRGEIGSPGVGYPGPSG
VRGPPGDPGMDGFPGQAGLPGPPGITLPCIVPGAYGPSGTPGFPGLPGSKGSTGFPGIPG
QPGLHGSKGQPGSRGIIGLQGEPGFPGPRGEQGSQGLPGLDGTDGLPGKMGPSGLAGTKG
APGDVFGAESGALGERGRPGLPGDKGLTGDPGFPGPKGLDGRAGLLGIKGEQGNRGYSGV
PGLRGPPGPGGPFGIKGKPGPLGSVGLTGAPGCQGLPGAKGLTGDVGPQGPAGMKGFPGL
DGAPGSPGETGFVGPPGPFGQDGRPGFSGPKGEKGSSGLLGFPGMPGLPGVPGLNGFKGA
PGTAGGKGSPGVVGLQGQKGDRGDIGPPGLPVLGPPEQALQFKGDKGDPGLAGLGGFPGP
RGDKGIPGSRGQLGLPGPAGLASKERGLHGDPGFPGPPGQPGLPGQKGTHGIAGFPGMPG
ERGSDGITGTLGFPGPIGLPGPKGDHGESLGVPGIAGAKGERGDPGFPGERGREGLKGEP
GYPGNTGVNGPKGGPGDLGPEGPAGIPGNAGLRGVPGPPGPPGQPGSVGFPGAQGTAGPK
GFYGFPGLNGLNGLPGTKGSPGTPGLSEAGLKGPAGLPGPKGEEGSPGLGRGAPGFPGPK
GSAGDTGPPGPVGLPGLPGTPGASLPSDIRGRPGDAGHPGTDGSSGLPGPPGLRGPPGPA
SDQGDTGNPGFPGVPGLRGIKGDVGPTGPIGLPGASGFKGIRGEPGLMGMPGKDGPPGDP
GHPGLKGEMGRRGLPGQQGAPGITPQPEEVTAPAGLPGLPGIDGVPGFDGDPGFQGPAGK
PGTKGLPGRSGLKGRDGLPGSPGIAGDPGPSGVPGPQGFEGAAGKPGSLGLPGMPGRSVG
VGYTLVKHSQSDQIPPCPIGMNKLWDGYSLLYVEGQEKSHNQDLGFAGSCLPRFSTMPFI
YCNINEVCYYASRNDKSYWLSTTAPIPMMPVDSVQIPQYISRCSVCEAPSQAVAVHSQDI
TIPQCPLGWRSLWIGYSFLMHTAAGAEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHY
FANKYSFWLTTVEQSQQFVSAPPSETLKAGQLRTRVSRCQVCMKNL
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atggggctgatgctgatgactttgctgccagtaacggagacgttggtagatatgacgaaa
gaagtgttccttctgtgtagctacaaagatagagcttttgattttctaaatcacatggaa
cgatttggaattatgttacttgcgttttcagaccaaggtggaaagaagacttacagtgga
ccatgcgggggccgtgattgcagcgctggatgcaaatgtcttccagagaagggtgcgcgg
ggtcgaccaggaccaattgggcttcaaggaccaataggtgcacctggatttactggccca
gaaggtttgccgggagcaaaaggtgagagaggagcagtgggcccccctggaccagctggg
cagaaaggcgacaagggcccaatgggagttccaggatttcaaggcatcaatgggatccca
ggtcaccctgggcaatctggacctagaggtctgcctggcctcgatggctgcaatggtacc
actgggagtcctggcgttcctggaccagacgggtttcctggcctacctgggctgcctggt
cgtcctggcccaaaaggccttaaaggagaacctgtttttgctcaaggcagtcttaaagga
atgaagggagaaaatggtcttcctggattggatggaatttctggcccaaaaggttttcca
ggtccagtaggttctgcagggcctataggattaccaggtttgcagggtccaatgggtccc
cctgggccaccaggtccaaaaggtaacatgggattaggctttcaaggagagaaaggagaa
aagggtgatgtagggctgcctggccctccaggtcccccaccatccactggaatactggaa
ttcatgggatttccaaaagggaagcaaggagaaaagggtaagctaggtcctcaaggactc
cccggagccaaaggattgcctggcctgccgggctttggaggtattggagagaaaggagaa
aaaggtgtgcctggcttaccgggtgtcaggggtcttttgggactggatggatctgatggg
attccagggagaaagggtcatccaggtgttccaggctatccaggactggatggagtcgaa
ggcatgaagggtgaattaggtgacattggccccccaggccctcctattgttattgacggg
gaaggtttagtcatttcaggtgcccagggtgaccctggaaacccaggaatacccggtcct
ccaggagaagaagggatcagtggtttaccaggcctgccaggcgctccggggtttccaggc
ctggagagagatggaatgggccctggaggttctccaggtattccaggtgtgaagggtgaa
gtgggagaaccaggaagagcaacaattggattaacgggcactcgtggcagagagggttta
ccgggtctgccaggagcaccaggattgcctggttcactacgcccttcattgcccccagac
accatcctgaatggaaggcctggggccccgggggagcctggacaaagagggctgccggga
gctttgggtccaaaggggtacaaaggagaagtaggcgattgtgcttgtgatggaggagtt
acaagagctggtccgaaaggcatctcaggtccaccaggtccatcaggaagccccggtgtg
tctgggattaagggcattggtggagacccaggcactgtgggtgcaccaggactacggggc
cctccggcttcatcaggtcagtcaggtcttccaggtcctaagggagaaaaaggggattcg
ttgtatgcaacaggcaaaggtgctcttttggaccgtggtgcgacagcacccagaggacct
tcaggcatcccaggaacccctggcagggatggacttcccggcttgccaggcccaccaggc
cctccaggtgatggggggctgggtttcccaggtgaaaaaggactgccaggactgcctggc
tctaagggccatcgtggagaaattggttctcctggcgttgggtacccaggtcctagcgga
gttcgtgggcctccaggtgacccgggaatggacgggtttccaggacaagcaggtcttcca
ggccctccaggtatcaccttgccctgcatagttcctggagcatatgggccctcagggact
cctggctttccaggactgccaggttccaaaggcagcacaggctttcccggcattccaggc
caacctggattacatgggtcaaaaggacagccagggtctcgaggaataataggcttgcaa
ggagaacctggcttccccgggcctcgaggagagcaagggtcacaaggacttccaggactg
gatggaacagatggtttgcctgggaaaatgggtccttcaggcttagctggaacgaaagga
gctcctggagatgtatttggtgctgagagtggagccctgggagagcgtggccgtcctgga
ctcccaggtgataaagggcttacaggggatcctgggtttccaggaccaaaagggcttgat
ggaagagcaggcctcctaggtattaaaggcgaacagggtaatcgaggatattcgggtgtc
cctggattgcggggacctcctggtcctggaggaccttttggcatcaagggaaaaccagga
cctttggggtcagttggcctcacaggagcaccaggctgtcaaggacttcctggagccaaa
ggcttgactggggatgttggcccgcaaggcccagctggtatgaaaggcttcccaggcctt
gatggtgctccaggatctcctggagaaacaggattcgtagggccacccggccctttcggt
caagatggacgtccaggtttttctgggccaaaaggcgagaaggggtcttctggcctgctt
ggtttccctggcatgccaggcctgcctggtgtgcctgggctgaatgggtttaaaggagct
cctggaacagctggaggaaaaggaagccctggagttgtgggactccaaggtcaaaaaggt
gaccgaggtgatataggtccacctggtcttcctgttctcgggcctccagaacaagctctg
caattcaaaggagacaaaggagatcctggattggctggacttggaggattccctggacct
agaggtgataaaggaatcccaggaagccgtggacagcttggtctacctggtccagctggg
ttagcaagcaaagagagaggtcttcatggtgacccaggcttccctggtccacctggacag
cctgggctgccaggacagaagggtacacatggtattgcaggatttccaggaatgccagga
gagaggggttcagatggtatcacaggaacacttggattcccaggacctattggcctccct
ggtccaaagggtgatcatggggagtctcttggcgttcctggcattgctggagcaaaagga
gaacgaggagacccagggttcccaggagagagagggagagaaggactcaagggtgaacca
ggttacccaggaaatactggggtgaatggacccaaaggtggcccaggagatcttggccca
gaaggaccagcaggaatccctggaaatgctgggctgagaggagtccctgggccaccgggt
cctccagggcagccaggatctgtcggattccctggagctcagggaacagcaggacctaaa
ggcttttatggctttccaggtttaaatggtctgaatggtttgccaggcacaaaagggtct
cctggaacaccaggtctgagtgaagctggactgaaaggtcctgcaggtctcccaggtcca
aagggtgaagaaggttctccaggcttgggtagaggagctccaggattccctggaccaaaa
ggctcagcaggagacacgggtccccctggtcctgtgggactgcctggcttgccaggaaca
cccggagcttctcttccttctgatatacgtgggaggcctggggatgctggccatccagga
actgacgggagttcaggtcttccaggtcctccaggactgcgagggccccctggcccagct
tctgaccaaggtgacacaggcaatccaggtttccctggtgttcccggcttgcgaggcatt
aagggtgacgtgggacccactggtccaattggactccctggagcctctggattcaaaggt
ataagaggggagcctggccttatggggatgccaggtaaagacgggcctccaggggatcct
ggccaccctgggctgaaaggtgaaatgggccgtcgaggtcttcctggccagcaaggggct
ccaggtataaccccacagccagaagaagtcacagcccctgcaggcttgcctggtctgccg
ggaattgatggtgtccctggctttgatggagatcctggatttcagggcccagctggaaaa
ccaggtacaaaaggtctgccaggaagatctggtttgaaaggacgtgatggtttacctgga
tcacctggcatagctggggatccaggaccttcgggtgtcccaggaccgcaggggtttgaa
ggtgctgctggaaagccgggctcccttggtttgccgggaatgcctggccggagcgtgggc
gttgggtacactctagtgaagcacagtcagtcagaccaaatcccaccttgtcccatcgga
atgaataagctctgggatggctacagcttgttgtatgtggaggggcaggaaaagtcacac
aaccaggatcttggttttgctggctcctgcttgcctcgcttcagcaccatgcctttcatt
tactgcaacatcaatgaagtgtgctactacgccagccgaaatgacaagtcctactggctc
tccaccaccgctcctatccccatgatgccagtggacagcgttcagatcccgcagtacatc
agtcgctgctcggtgtgtgaagcaccttcccaggccgtggcggtgcacagccaggacatc
accatcccacaatgtccccttggctggcgcagcctatggataggatactccttccttatg
cacactgcggctggggcagaaggtggaggtcagtcccttgtctcgcctggctcttgcctg
gaggatttccgggctactcccttcattgaatgcaacggtgcgaggggaacatgccactac
ttcgcaaacaaatacagcttctggctgacaaccgttgaacagtcgcagcagtttgtcagt
gctcctccctcagaaacgctgaaagcgggacagcttcgaacaagggtcagccgttgccaa
gtgtgcatgaagaacttgtag
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