Buceros rhinoceros silvestris (rhinoceros hornbill): 104498652
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Entry
104498652 CDS
T08612
Symbol
PCDH1
Name
(RefSeq) protocadherin-1
KO
K16498
protocadherin delta 1
Organism
brhi
Buceros rhinoceros silvestris (rhinoceros hornbill)
Pathway
brhi03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
brhi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
104498652 (PCDH1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
brhi01009
]
104498652 (PCDH1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
brhi04515
]
104498652 (PCDH1)
Protein phosphatases and associated proteins [BR:
brhi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104498652 (PCDH1)
Cell adhesion molecules [BR:
brhi04515
]
Cadherins
Protocadherins
104498652 (PCDH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
K319L-like_PKD
TMEM154
Mid2
Syndecan
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
104498652
NCBI-ProteinID:
XP_010140357
LinkDB
All DBs
Position
Unknown
AA seq
1155 aa
AA seq
DB search
SDYGLPDVGHLYKLEVGAPYLRVEGKSGDIYTTETSIDRESLRECQYLPPGQPCFLEFEV
SITDLIMSSSPRLLEGQIEVLDINDNTPNFASPVLTLSIPENTNIGTXXXXXXXXXXXXG
ATGVASYELMAGPEAQELFGLQVAEDQEEKQPQLIVMGNLDREQWDSYDLTIKVQDGGNP
PRASSALLRITILDMNDNAPKFEKALYEAELSENSPVGHSVLQVKANDSDQGANAEIDYS
FHQASDMVRRLLRLDRATGLITVQGPIDREDVNILKFSVMAKDKGANPKTARTQVVVTIK
DMNDNAPSIEIRGIGLVTHQDGMANISEDVPVETAVALVQVSDRDEGENAVVTCVVAGDV
PFQLRQASESGSDSKKKYFLQTTTPLDYESVKDYTIEIVAVDSGNPPLSSTNSLKVQVVD
VNDNAPVFSQSFTEVAFPENNEPDDLVMEVSASDADSGSNAKLVYSLVTDPSSKGSFAID
PDSGEIRVKAVLDREQRERYEFLVVAADKGSPSLKGTASVAINVMDRNDNDPKFMLSGYN
FSVMENMPPLSPVGMVTVIDADKGENARIQLSVEQDNGDFVIQNGTGTILSSISFDREQQ
STYTFRLKAVDGGDPPRSAYVGVTINVLDENDNAPFITSPSNATYKHILPHTSPGQQVSK
VKAEDIDSGVNAELTYSITGGNPFELFQISPHSGDITLEKEILRKHHGLHRLVVRVNDKG
KPSRHGTALVHFYVNETLANRTLLDTLVGHSLDTPLDIDIAGDPEYERSKQRSNILFGVI
AGIVAVTLVIVLVVLVRYCRQREAKSGYQAGKKETKDLYAPKQASKSSKSKSKVKKSKSP
KPPKPTEDEEETGLQKSLKFNLMNDSVSDSPRIHLPLNYPPGSPDLGRHYRSNSPLPSIQ
LQPQSPSASKKHQVVQDLPATNTFVGTGDNNSTGSEQYSDYSYRTNPQKYTNKQLPHRRV
TFSAASQAQDLQDPSQHSYYDSGLEESETPSSKSSSGPRIGPLALPEDHYERTTPDGSIG
EMEHPENDLRPLPDVAMTGTCTRECTEFGHSDTCWMPGQSSPSRRPKNALKLSTFVPYQD
RGSQEQVGNGSPRLSEERSTKMANLRLLPTYSAFSNSSHEPCKDSPMEEIPLTQTSDFQP
ATTPSSQTTKREIYL
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
tctgactatggcttgccagacgtggggcacctctacaagctcgaagtgggggccccatac
ctacgtgtggaaggcaagagcggcgacatctacaccacagagacctccattgatcgggag
agcttgcgtgagtgccagtacctccctcccggacagccctgcttcctggagtttgaagtg
tccatcactgacctcatcatgagcagcagcccacgcctgctagaggggcagatagaggtg
ctcgatatcaatgacaacacccccaacttcgcctcgcctgttctcacactctccatccct
gaaaacaccaacatcgggacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngggt
gccaccggcgttgcctcctatgagctgatggctggtccagaggcgcaggagctctttggg
ctgcaggtggctgaggatcaggaagagaagcagccgcagctgattgtcatgggaaacctg
gaccgggagcagtgggactcctatgatctgaccatcaaggtgcaggacggaggcaacccg
ccacgggcgagcagcgccctgcttcgcatcacaattctggacatgaacgacaacgcgccc
aagttcgagaaggccctgtatgaggcggagctctctgaaaacagccccgtggggcactct
gtcctccaggtcaaagccaacgactcggaccagggcgccaatgctgaaatagactactcc
ttccaccaagcctcagacatggtccgccggctgctgcgcctggaccgtgccacagggctc
atcaccgtgcagggccccattgaccgtgaggacgtcaacatcctcaagttctctgtcatg
gccaaggacaagggggccaaccccaagaccgcccgcacccaggtggtggtcaccatcaag
gacatgaacgacaatgcgccctccatagagatccgggggattggacttgtcacccaccag
gatggcatggcaaacatctcggaggacgtaccagtagagacagcagtggctctggtacag
gtgtccgaccgagatgagggcgaaaatgccgtggtgacatgcgtggtggctggtgatgtc
ccattccagctgcggcaggcgagtgaatcagggagcgacagcaagaagaaatacttctta
cagaccaccacaccactagactacgagtcagtgaaggactacactatcgagattgtggca
gtggactcggggaacccgcctctctccagcaccaactctttgaaggtgcaagtggtggac
gtgaatgacaatgcacctgtcttcagccagagcttcaccgaggtggccttccctgagaac
aatgagcccgacgacctggtgatggaggtgagcgccagtgatgctgacagcggctccaac
gccaagctggtttactccctggtgacggacccctcctccaaggggtcttttgccattgac
cccgactccggggagatccgggtgaaggcagtgctggatcgagagcagcgggagcgctac
gaattcttggtggtagcggcagacaagggcagccccagcctcaagggcacagcgtctgtg
gccatcaacgtcatggacaggaatgacaatgaccccaagttcatgctgagcggctacaac
ttctcggtgatggagaacatgccgcccctcagccctgtgggcatggtgacggtgattgat
gctgacaaaggagaaaatgcccgcatccaactgtcggtggagcaagacaacggggatttt
gtcatccagaatggcactggcaccatcctctccagcatctctttcgaccgggagcagcag
agcacgtacactttccgactcaaggcagtagatggtggggatcctcccaggtctgcctac
gtgggggtgactatcaacgtcttggatgagaatgataatgcccccttcatcacttcaccc
tccaatgccacctacaaacacattctgccccacaccagtcctggccagcaagtgagcaag
gtcaaggcagaggacattgactctggcgtcaatgcagagctgacctacagcatcacagga
ggcaacccctttgagctcttccagatctccccccacagcggagacatcaccctggagaag
gagatcctgcgtaagcaccacggcctgcaccgcttggtagtccgcgtcaacgacaagggc
aagccctcacggcacggcacagcgctggtgcacttctacgtcaacgagacgctggccaac
cgcacgctgctggacacactggtagggcacagcctggacactccactagacatagacatc
gctggagaccccgaatatgagcgcagcaaacagcgaagcaatatcctctttggagtcatc
gctggcatcgtggctgtcaccctcgtcatcgtgctggttgtcctggtgcgctactgccgg
cagcgagaggccaagagcggctaccaggcaggcaagaaggagaccaaggacctgtacgca
cccaagcaggccagcaagagcagtaagagcaagagcaaggtgaagaagagcaagtctccg
aagccacccaagcccacagaggatgaggaggaaacggggctgcagaaatcactcaagttc
aacctcatgaacgactctgtcagtgacagcccccgaatccacctacccctcaactacccg
ccgggcagcccagacttgggtcgccactaccgctccaactcaccgctgccctccatccag
ctgcagcctcagtcaccctctgcctccaagaagcaccaagttgtgcaggacctgccggcc
accaacacctttgttggcaccggggacaacaactcaacaggctccgagcagtactcggac
tacagctaccgcaccaatccccagaaatacaccaacaagcagttacctcatcgccgagtg
acgttctctgcagccagccaggctcaggacctgcaagatccctcccagcacagctactac
gacagcgggctggaggaatcagagaccccaagcagcaaatcatcgtcggggccccgcatt
gggccactagccctgcctgaggaccactatgaacgcaccacgcccgatggcagcatcggg
gaaatggagcaccctgagaacgatctccggcctctgcccgatgtagccatgactgggacc
tgtacccgggagtgcacagagttcggccactccgatacctgctggatgcccggccagtcc
tcccccagccgcaggcccaagaacgccctcaaactctccacttttgtgccttaccaagac
agagggagtcaagagcaagtcgggaatggcagccccagactctcagaagagcgcagcacc
aaaatggccaacctccgcctgctccccacgtacagtgccttctccaatagtagccatgag
ccctgcaaggactctcccatggaggaaattcctctcacccagacctcggacttccagcca
gccaccaccccctcgtcccagaccaccaagagggagatatacctgtga
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integrated database retrieval system
