Buceros rhinoceros silvestris (rhinoceros hornbill): 104499746
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Entry
104499746 CDS
T08612
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
brhi
Buceros rhinoceros silvestris (rhinoceros hornbill)
Pathway
brhi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
brhi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104499746 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
brhi03021
]
104499746 (TAF5)
03036 Chromosome and associated proteins [BR:
brhi03036
]
104499746 (TAF5)
Transcription machinery [BR:
brhi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
104499746 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
104499746 (TAF5)
Chromosome and associated proteins [BR:
brhi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
104499746 (TAF5)
STAGA complex
104499746 (TAF5)
TFTC complex
104499746 (TAF5)
SAGA complex
104499746 (TAF5)
SLIK complex
104499746 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Beta-prop_SPT8
WD_LRWD1
Beta-prop_Nup120_160
PEP5_VPS11_N
CDK5RAP3
WD40_like
RAB3GAP2_N
eIF2A
VID27
Motif
Other DBs
NCBI-GeneID:
104499746
NCBI-ProteinID:
XP_010141597
LinkDB
All DBs
Position
Unknown
AA seq
614 aa
AA seq
DB search
GGGVVVEDQPDVSAVLSAYNQQGDPTLYEEYYSGLKHFIECSLDCHRAELSQLFYPLFVH
MYLELVYNQHESEAKSFFERFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDFRTSKFV
LRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLAGEAKRE
ANKAKVFFGLLKEPEFDVPLDDEDEEGENEEGKPKKKKPKKDSAGSKSKKQDPNAPPQNR
IPLPELKDSDKLDKVMNMKEAARRVRLGPECLPSICFYTFLNAYQGLTAVDITDDSSMIV
GGFADSTVRVWSVTPKKLRSVKTAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPV
YGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHD
RVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTIRLWDVLNGNCVRIFT
GHKGPIHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFSRDGEIL
ASGSMDNTVRLWDAVKAFEDLETDDFTTATGHINLPENSQDLLLGTYMTKSTPVIHLHFT
RRNLLLAAGAYSSQ
NT seq
1847 nt
NT seq
+upstream
nt +downstream
nt
ttggaggcggcgttgttgtggaagatcagccagatgtgagtgcagtattgtctgcctaca
atcaacagggggacccgaccctgtatgaggaatactacagcgggttaaaacacttcattg
agtgttccctagactgtcatcgagcggaattgtctcagctgttttatcctctgtttgtgc
acatgtacttggaattggtctacaatcaacacgagagtgaagcaaagtctttttttgaaa
gatttcatggggatcaggagtgctattaccaggatgacctgcgtgtattatctagcttaa
ccaaaaaagaacatatgaaaggtaacgagaccatgctggatttccgaacaagcaagtttg
tgctgcgtatttcccgtgactcttaccagctcttgaagaggcatcttcaggaaaagcaga
acaatcagatctggaacattgttcaggaacatctttacattgatatctttgatggaatgc
ctcgcagtaaacaacagatagatgctatggttggaagcttggctggggaggcaaaacgag
aggctaacaaagcaaaggttttctttggcttattgaaagaaccagagtttgatgtgcctt
tggatgatgaagatgaagaaggagaaaatgaggaaggaaagccaaagaagaaaaaaccga
aaaaagatagtgcagggtcaaaaagtaaaaaacaagaccctaatgcacctccccaaaaca
gaattcctctgcctgaactgaaagactctgacaagctggataaagtaatgaatatgaagg
aagctgcaaggcgcgtgcgtcttggcccagagtgcctgccctctatctgtttctacacgt
tccttaatgcttaccagggcctgactgcagtggatatcacggatgactcaagcatgattg
tcggaggctttgctgactctactgtcagagtgtggtctgtaactccgaaaaagctacgta
gtgtgaaaacagcagcagacctcagtctcatcgacaaagaatcggatgatgtcttggaga
ggatcatggatgagaaaactgcaagtgagttgaagattttgtatggtcacagtggacctg
tctatggcaccagcttcagtcctgataggaactatctgttgtcctgttccgaggatggca
ctgtcagattgtggagtctccaaacattcacatgtttggtgggatataaaggacacaact
atccagtatgggatacgcagttctctccttacggttattactttgtgtcagggggacacg
acagagtggctcgtctgtgggcaacagatcactaccagcctttacggatatttgctggcc
atcttgctgatgtgacgtgcacccgatttcatccaaactccaactatattgccaccggct
cagcagacaggactatacggctctgggatgttttgaatgggaattgtgtgagaatattca
ctgggcataagggaccaattcattcgttggcattttctcctaatggacgattcctggcta
ctggagcaacagatggaagagttctgctgtgggatattggacatggcttgatggttggag
aattgaaagggcacactgacactatctacgcgctcagattcagcagagatggggagattt
tagcatcaggttcaatggataacacagttcgtctgtgggatgctgtgaaggcatttgaag
atctagaaactgatgactttactacagccactggacatataaacttgcctgaaaactccc
aggacttgttactaggtacatacatgaccaaatcaaccccggtcatacacctccacttta
cacgcagaaacttgctgctggctgcgggagcctacagttcacagtga
DBGET
integrated database retrieval system
